BAC Information

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BAC

Clone NameB6Ng01-096K21
Chromosome10 (Build37)15 (Build37)
Map Location 104,053,581 - 104,054,41210,586,748 - 10,587,317
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096K21.bB6Ng01-096K21.g
ACCDH907261DH907262
length968566
definitionDH907261|Mus musculus domesticus DNA, BAC clone: B6Ng01-096K21, 5' end.DH907262|Mus musculus domesticus DNA, BAC clone: B6Ng01-096K21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,581 - 104,054,412)(10,586,748 - 10,587,317)
sequence
gaattccagaaaatcaaataaccccattaaaaaatggggctcagagctga
acaaagaattctcacctgaggaataccgaatggcagagaagcacctgaaa
aaatgttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccct
gagattccacttcactccagtcagaatggctaagatcaaaaactcaggtg
acagcagatgctggcgaggatgtggagaaaggggaacactcctccattgt
tggtgggattgcaggcttgtacaaccactctggaaatcagtctggcagtt
cctcagaaaattggacatagtactaccggaggatccagcaatacctctcc
tgggcatatatccagaagatgtcccaaccggtaagaagaacacatgctcc
actatgttcatagcagccttgtttataatagccagaagctggaaagaacc
cagatgcccctcaacagaggaatggatacagaaaatgtggtacatttaca
caatggaatactactcagctattaaaaaaatgaatttatgaaattcctag
gcaaatggatggtcctggagggcatcatcctgagtgaggtaacccaatca
caaaagaactcacatgatatgtactcactgataagtggatattagcccag
aaacttaggatacccaagatataagatacaacttgccaaacgcatgaaat
tcaagaagaacgaagaccaaagtgtggacactttaccctttcttagaaat
ggaatgtcttgtatttttaaaaagtaaacctgcaaatgaacgctggggtg
gggggcggttaatgtattcatacacagtccagtctctgagagagtatttg
tctgatatatacaaggccctaaatctgaacctcagcagcacacacacaca
cacacacacacacacacacacacacacacactcactcactcacatgctca
agtgacccccacttagac
tttgagtttattgatgaacctgtgtagctgaaattgatggatacagtgag
agactctctcaaaaggtaaagttcagagcaaagaaacaagacagctgcct
ccatcaacccctgacctccacatcaacccctgacctccacactcatgccc
ctgcatggacccacaagtacatatacatataacacatgcacactagatgg
atggatggatggatggatggatggataagagcaaatatgctactacattc
atgttatagaaagaaaaattttaaaaaattaaataactacccaagttcaa
ctcacaaaagcaaatgctgttaaatttctgatatggacttggcacacggt
caatactttaaatattgttcactatagccaagacttatttaactatggtt
catcatttttctagtaaagtcaggtgccaaatccgtccagtcttttgagc
taggtttgatgttgagatgttgttcatacttatgacatcattttgaacac
atcttgttctaagtttcagaaacggtgagctgtttcagtaagtgtccctg
gaaaaccgaagaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053581_104054412
seq2: B6Ng01-096K21.b_52_670 (reverse)

seq1  AGTACATATTGCGCGAGTTCCTTTGTGATTGGGTTACCGCACTCAGGATG  50
      |||||||||   | |||||| ||||||||||||||||| |||||||||||
seq2  AGTACATATCATGTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATG  50

seq1  ATACTCTCCAGGTCCATCCATTTGCCTAGGAATTTCATAAATTCATTCTT  100
      || | ||||||| |||||||||||||||||||||||||||||||||| ||
seq2  ATGCCCTCCAGGACCATCCATTTGCCTAGGAATTTCATAAATTCATT-TT  99

seq1  TTTAATAGCTCCATTTACATTTAATTTAATTAATGTAATTACAATTAATT  150
      |||||||||                                         
seq2  TTTAATAGC-----------------------------------------  108

seq1  AATTTATTAATTAAATAATTTAATAATTTAATTGATAAATTAATTTAATT  200
                                                        
seq2  --------------------------------------------------  108

seq1  AATTAATTTAATTAATTAAATTAAATAATAATTTAATAATAAATTAAATA  250
                                                        
seq2  --------------------------------------------------  108

seq1  TTTTAAAATTAATAATAATTTTATAAGTAAATAATTTAATTAATGTAATT  300
                             | ||||                     
seq2  -----------------------TGAGTA---------------------  114

seq1  TAATTAATGTAATTACATTACATTTAATAGCTCCATTGTGTAAATGTACC  350
              |||                    |||||||||||||||||||
seq2  --------GTA-------------------TTCCATTGTGTAAATGTACC  137

seq1  ACATTTTCTGTATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAG  400
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAG  187

seq1  CTCCTGGCTATTATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTC  450
      || |||||||||||||| |||||||||||||| |||||||||||||||| 
seq2  CTTCTGGCTATTATAAACAAGGCTGCTATGAACATAGTGGAGCATGTGTT  237

seq1  CTTCTTACCGGTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTG  500
      |||||||||||||||| |||||||||||||||||||||| ||||||||||
seq2  CTTCTTACCGGTTGGGACATCTTCTGGATATATGCCCAGGAGAGGTATTG  287

seq1  CTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACG  550
      |||||||||||||||||||||||||||||||||||| |||| ||||||| 
seq2  CTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACT  337

seq1  GATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAG  387

seq1  TGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTT  650
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTTCCCCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAGTTTT  437

seq1  TGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTG  700
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  TGATCTTAGCCATTCTGACTGGAGTGAAGTGGAATCTCAGGGTTGTTTTG  487

seq1  ATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTT  537

seq1  CTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGC  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCAGCTCTGAGC  587

seq1  CCCATTTTTTAATAGGGTTATTTGATTTTCTG  832
      ||||||||||||| ||||||||||||||||||
seq2  CCCATTTTTTAATGGGGTTATTTGATTTTCTG  619

seq1: chr15_10586748_10587317
seq2: B6Ng01-096K21.g_67_638

seq1  GAATTCTTTGAGTTTATTGATGAACCTGTGTAGCTGAAATTGATGGATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAGTTTATTGATGAACCTGTGTAGCTGAAATTGATGGATAC  50

seq1  AGTGAGAGACTCTCTCAAAAGGTAAAGTTCAGAGCAAAGAAACAAGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGACTCTCTCAAAAGGTAAAGTTCAGAGCAAAGAAACAAGACAG  100

seq1  CTGCCTCCATCAACCCCTGACCTCCACATCAACCCCTGACCTCCACACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCATCAACCCCTGACCTCCACATCAACCCCTGACCTCCACACTC  150

seq1  ATGCCCCTGCATGGACCCACAAGTACATATACATATAACACATGCACACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCTGCATGGACCCACAAGTACATATACATATAACACATGCACACT  200

seq1  AGATGGATGGATGGATGGATGGATGGATGGATAAGAGCAAATATGCTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGATGGATGGATGGATGGATGGATGGATAAGAGCAAATATGCTACT  250

seq1  ACATTCATGTTATAGAAAGAAAAATTTTAAAAAATTAAATAACTACCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATGTTATAGAAAGAAAAATTTTAAAAAATTAAATAACTACCCAA  300

seq1  GTTCAACTCACAAAAGCAAATGCTGTTAAATTTCTGATATGGACTTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACTCACAAAAGCAAATGCTGTTAAATTTCTGATATGGACTTGGCA  350

seq1  CACGGTCAATACTTTAAATATTGTTCACTATAGCCAAGACTTATTTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTCAATACTTTAAATATTGTTCACTATAGCCAAGACTTATTTAACT  400

seq1  ATGGTTCATCA-TTTTCTAGTAAAGTCAGGTGCCAAATCCGTCCAGTCTT  449
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCATCATTTTTCTAGTAAAGTCAGGTGCCAAATCCGTCCAGTCTT  450

seq1  TTGAGCTAGGCATGATGTTGAGATGTTGTTCATACTTATGACATCATTTT  499
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTAGGTTTGATGTTGAGATGTTGTTCATACTTATGACATCATTTT  500

seq1  GAACACATCTTGTTCAAAG-TTCAGAAACGGTGAGCTGTTTCAGTAAGTG  548
      ||||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  GAACACATCTTGTTCTAAGTTTCAGAAACGGTGAGCTGTTTCAGTAAGTG  550

seq1  TCCCTGGAAAACCGAAGACCCT  570
      ||||||||||||||||||||||
seq2  TCCCTGGAAAACCGAAGACCCT  572