BAC Information

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BAC

Clone NameB6Ng01-097E02
Chromosome10 (Build37)
Map Location 23,878,184 - 24,037,985
singlet/doubletdoublet
Overlap geneStx7, Moxd1
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9
Downstream geneLOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097E02.bB6Ng01-097E02.g
ACCDH907678DH907679
length1,016506
definitionDH907678|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E02, 5' end.DH907679|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,036,974 - 24,037,985)(23,878,184 - 23,878,695)
sequence
gaattctataactttagtatctaaagtatactttaatgctttctaggtca
ttgcccgggatacaacggcccttccaacagcatttgcacagttgattgct
tgctagtcatttttttctgagagtcaagcacacctgcaccaacctgacat
tgagagtaagaatctaggaagagtttgagaagggaattagacatagggga
aatgggaaagggggaaaatgggaggaagtcaatattaaaatttgagactg
tggtaaagaaaatattattaaaatgtctcggagtattttgatagggttgg
aagtatctaggtcaaataaggtcccagacgtgtgtttccatgttgacact
gttggagccagatgagactctgattctcccgggtctcctccttattcctt
aggtgccacatacgcatccgactcacgtcaaaacagaaagctggactcct
cctataagaatgtgctggcaggcagtctgggtgacctttaagaatcagtc
attccaaatgggcactggagcggagggagtaagcctggaccgcctcacat
ccacagacgctggcaaggaggcgcacctccagttacaagcagcacaattt
tgtgtgtgtctgtgtgtgtgtttttcaaactgcctgcccagaccttccag
tattttccatagacctgctgcagaaaataatgccagccccaagttgaaca
ggatgtgaaaactctccctccctcttctgagacagtctccctcccatgct
acagctccggatggatgctggccgccttttactcagccctgtgtgatttg
cgtaaattgttgtagcagccagatctcgagagcaaatactgggctatctt
cttcccgttgtcattgagttcgtcctttgtcccacggcagctggcactgc
gccacatccggaactggtcctacaccaggcttattggctcactatggggt
aaacacagctgaccagcggcctcagtcttttcgtccttactcagcccttt
ttaaaaaacctttcca
cacacccctaagccccttaccccataaaaacccctggctttcgagcctcg
tggccgacatccgttatctcctgtgtgggatgcatgttggtccggagctc
cgtcattaaatgtcctcatgtaattacatcaagagatggtccttcgtgat
tttttgggtgcacactgaatcgggaattgggtgggggtttccccactagg
tctaacaaaagcagtgtgtggtatgacagttaaaagcaacacagcctccc
gtgaggagacagactgaaagtgatgtgggagcagctgggtgctttgttgc
ttagatgggccctggatacaggaggagaaaggcctggtagagagagctac
cagggcaagtcacatgaaggtgatcgcagcagtaaacaccccaaagcagt
ctagagcttgagttgctcagaagaggagaacaaagaagcctcatgtctaa
tgcacagtacttgagactagagtagccagaggggaattcagggggggggg
ggggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24036974_24037985
seq2: B6Ng01-097E02.b_47_1062 (reverse)

seq1  TGGAAAGGTTTTTTAAAAA-GGCTGAGTAAGGACAGAAAGACTGGAGGCC  49
      ||||||||||||||||||| ||||||||||||||  ||||||| ||||||
seq2  TGGAAAGGTTTTTTAAAAAGGGCTGAGTAAGGACGAAAAGACT-GAGGCC  49

seq1  GCTGGTCAGCTGTGTTTA-CCCATAGTGAGCCAATAAGCCTGGTGTAGGA  98
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCTGGTCAGCTGTGTTTACCCCATAGTGAGCCAATAAGCCTGGTGTAGGA  99

seq1  CCAGTTCCGACTGTGGCGCAGTGCCAGCTGCCGTGGGACAAAGGACGAAC  148
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCCGGATGTGGCGCAGTGCCAGCTGCCGTGGGACAAAGGACGAAC  149

seq1  TCACTGAC-ACGGGAAGAAGATAGCCCAGTATTTGCTCTCGAGATCTGGC  197
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGACAACGGGAAGAAGATAGCCCAGTATTTGCTCTCGAGATCTGGC  199

seq1  TGCTACAACAATTTACGCAAATCACACAGGGCTGAGT-AAAGGCGGCCAG  246
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCTACAACAATTTACGCAAATCACACAGGGCTGAGTAAAAGGCGGCCAG  249

seq1  CATCCATCCGGAGCTGTAGCATGGGAGGGAGACTGTCTCAGAAGAGGGAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATCCGGAGCTGTAGCATGGGAGGGAGACTGTCTCAGAAGAGGGAG  299

seq1  GGAGAGTTTTCACATCCTGTTCAACTTGGGGCTGGCATTATTTTCTGCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTTTTCACATCCTGTTCAACTTGGGGCTGGCATTATTTTCTGCAG  349

seq1  CAGGTCTATGGAAAATACTGGAAGGTCTGGGCAGGCAGTTTG-AAAACAC  395
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGGTCTATGGAAAATACTGGAAGGTCTGGGCAGGCAGTTTGAAAAACAC  399

seq1  ACACACAGACACACACAAAATTGTGCTGCTTGTAACTGGAGGTGCGCCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGACACACACAAAATTGTGCTGCTTGTAACTGGAGGTGCGCCTC  449

seq1  CTTGCCAGCGTCTGTGGATGTGAGGCGGTCCAGGCTTACTCCCTCCGCTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAGCGTCTGTGGATGTGAGGCGGTCCAGGCTTACTCCCTCCGCTC  499

seq1  CAGTGCCCATTTGGAATGACTGATTCTTAAAGGTCACCCAGACTGCCTGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCCATTTGGAATGACTGATTCTTAAAGGTCACCCAGACTGCCTGC  549

seq1  CAGCACATTCTTATAGGAGGAGTCCAGCTTTCTGTTTTGACGTGAGTCGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACATTCTTATAGGAGGAGTCCAGCTTTCTGTTTTGACGTGAGTCGG  599

seq1  ATGCGTATGTGGCACCTAAGGAATAAGGAGGAGACCCGGGAGAATCAGAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTATGTGGCACCTAAGGAATAAGGAGGAGACCCGGGAGAATCAGAG  649

seq1  TCTCATCTGGCTCCAACAGTGTCAACATGGAAACACACGTCTGGGACCTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTGGCTCCAACAGTGTCAACATGGAAACACACGTCTGGGACCTT  699

seq1  ATTTGACCTAGATACTTCCAACCCTATCAAAATACTCCGAGACATTTTAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACCTAGATACTTCCAACCCTATCAAAATACTCCGAGACATTTTAA  749

seq1  TAATATTTTCTTTACCACAGTCTCAAATTTTAATATTGACTTCCTCCCAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTCTTTACCACAGTCTCAAATTTTAATATTGACTTCCTCCCAT  799

seq1  TTTCCCCCTTTCCCATTTCCCCTATGTCTAATTCCCTTCTCAAACTCTTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCTTTCCCATTTCCCCTATGTCTAATTCCCTTCTCAAACTCTTC  849

seq1  CTAGATTCTTACTCTCAATGTCAGGTTGGTGCAGGTGTGCTTGACTCTCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTCTTACTCTCAATGTCAGGTTGGTGCAGGTGTGCTTGACTCTCA  899

seq1  GAAAAAAATGACTAGCAAGCAATCAACTGTGCAAATGCTGTTGGAAGGGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATGACTAGCAAGCAATCAACTGTGCAAATGCTGTTGGAAGGGC  949

seq1  CGTTGTATCCCGGGCAATGACCTAGAAAGCATTAAAGTATACTTTAGATA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTATCCCGGGCAATGACCTAGAAAGCATTAAAGTATACTTTAGATA  999

seq1  CTAAAGTTATAGAATTC  1012
      |||||||||||||||||
seq2  CTAAAGTTATAGAATTC  1016

seq1: chr10_23878184_23878695
seq2: B6Ng01-097E02.g_68_579

seq1  GAATTCCACACCCCTAAGCCCCTTACCCCATAAAAACCCCTGGCTTTCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCCCTAAGCCCCTTACCCCATAAAAACCCCTGGCTTTCGA  50

seq1  GCCTCGTGGCCGACATCCGTTATCTCCTGTGTGGGATGCATGTTGGTCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGTGGCCGACATCCGTTATCTCCTGTGTGGGATGCATGTTGGTCCG  100

seq1  GAGCTCCGTCATTAAATGTCCTCATGTAATTACATCAAGAGATGGTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCGTCATTAAATGTCCTCATGTAATTACATCAAGAGATGGTCCTT  150

seq1  CGTGATTTTTTGGGTGCACACTGAATCGGGAATTGGGTGGGGGTTTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATTTTTTGGGTGCACACTGAATCGGGAATTGGGTGGGGGTTTCCCC  200

seq1  ACTAGGTCTAACAAAAGCAGTGTGTGGTATGACAGTTAAAAGCAACACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTCTAACAAAAGCAGTGTGTGGTATGACAGTTAAAAGCAACACAG  250

seq1  CCTCCCGTGAGGAGACAGACTGAAAGTGATGTGGGAGCAGCTGGGTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCGTGAGGAGACAGACTGAAAGTGATGTGGGAGCAGCTGGGTGCTT  300

seq1  TGTTGCTTAGATGGGCCCTGGATACAGGAGGAGAAAGGCCTGGTAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTAGATGGGCCCTGGATACAGGAGGAGAAAGGCCTGGTAGAGAG  350

seq1  AGCTACCAGGGCAAGTCACATGAAGGTGATCGCAGCAGTAAACACCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCAGGGCAAGTCACATGAAGGTGATCGCAGCAGTAAACACCCCAA  400

seq1  AGCAGTCTAGAGCTTGAGTTGCTCAGAAGAGGAGAACAAAGAAGCCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCTAGAGCTTGAGTTGCTCAGAAGAGGAGAACAAAGAAGCCTCAT  450

seq1  GTCTAATGCACAGTACTTGAGACTAGAGTAGCCAGAGGGGAATTCAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATGCACAGTACTTGAGACTAGAGTAGCCAGAGGGGAATTCAGGGG  500

seq1  GGGGGGGGGGCT  512
      ||||||||||||
seq2  GGGGGGGGGGCT  512