BAC Information

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BAC

Clone NameB6Ng01-097L10
Chromosome10 (Build37)
Map Location 26,136,226 - 26,137,232
singlet/doubletsinglet
Overlap genenone
Upstream geneEpb4.1l2, 2010003K15Rik, EG667513, LOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208
Downstream geneLOC667572, LOC100040349, Arhgap18, Lama2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097L10.bB6Ng01-097L10.g
ACCDH908009DH908010
length9901,065
definitionDH908009|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L10, 5' end.DH908010|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaattccacagggaagaaagataaggttgaggttaatcagtaga
tcgagaagaaggatggcaactaagaggatttttttgttttttgttttttg
tttttctattcatgaatagaaagggagaacacaaaagctaggcaccttaa
gagctgaaggggaccttataagctgacgagaaataaggctggcagaaggg
ctcaggccaccattgctaccaagtcagagcagtgtaactctctggcatgc
cagaaggctctctaattaagtactgtgggcgtgtctgagggctgtgtttc
tcaaacttgtgagataacagaaccatcctgggctcgttaaattttagctc
aagggaatttgatttcattcttttaaaccgaggtcccaggaggactcacg
tcctgagaaactgactagagatgaacctagaactcaggaagggttaagac
atgtcaatatttatcctaaaggcaaaatgctgccattcaaggatctaaag
acaagtaacaactagatcacatttgcatcttagaaaatttacaggcgggc
tggagaaatggctcagtgggtaagagcactgactgctcttccaaaggtcc
tgagttcaagtcccagcaaccacatggtggctcacaaccacccataatga
gatctgacacactcttctggtgtgtcagaagaccgctacaatgtacttat
gtataataaataaataaatctgccgggcgtggtggcgcacacctttaatc
ccagcactttggagggagaggcaggcatatttctgagttcgaggctagcc
tggtctacaaagtgagtccaggacagccaggactacacagagaaaccctg
tctcaaaaaccaataataaataataataaatatattaataattaaaatag
taaaatgatataataaatctttgggctggactgagtggtcagagttgacc
agatagagcagatgtcccaattcattcctaaataataaat
gaattctttgtttagctctgtaccccatttttattagcgttatttgattt
tctggagtccaacttcttgagttttttttatatatattggatattagtcc
cctaccatatttaggactcgtaaagatcctttcccaatctgtaggtggct
ttttttttttaattgacagtgtcttttgccttacagaagctttgcaattt
tatgaggtcccatttgttaattctggatcttacagcacaagccattgctg
ttctgttcaggaaaattttccctgtgcccatatcttagaggcttttcccc
actttctcctctataagtttcagtgtctctggttttatgtggagttcctt
gatacacttagacttgagctttgtacaaggagataagaatggatcaattc
gaattcttctacatgataacagccagttgtgccagcatcttttattgaaa
gtgctgtcttttttccactggatggttttggctcccttgtcaaagatcaa
ctgaccataggtgtgtaggtttgtttctgggtcttcaattatttatttat
ttatttatctatctatctatctatctatctatctatctatctatctatct
atctatttatttatttatattagatattttctttatatacatttcaaatg
ctatcctgaaagttccctataccctcccactgccctgctcccttacccac
tcactcctgcttcttggccctggcattcccctgtactggagcatataaag
tttgcgatacaaaggggcctctcttcccagtgatggccaactaggccacc
ttctgctacatatgcaactagagacatgagctctggggtactggttagtc
catattgtttttctacctatagggttgcagacacaacttgggtgctctct
ctagcgtctcatttgggggccctgtgttccatcttatagatgacttgtga
gcatccacttctgtatttgccaggcagtgggctttgcttcattgaagaca
gctatacaagggtccctttcatcaaaatcttgcttggcatatgcataaat
gccagggtctagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26136226_26137232
seq2: B6Ng01-097L10.b_37_1026

seq1  GAATTCAAATTCCACAGGGAAGAAAGATAAGG-GGAGGTTAATCAGTAGA  49
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  GAATTCAAATTCCACAGGGAAGAAAGATAAGGTTGAGGTTAATCAGTAGA  50

seq1  TCGAGAAGAAGGATGGCAACTAAGAGGATTTTTTTGTTTTTTGTTTTTTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGAAGAAGGATGGCAACTAAGAGGATTTTTTTGTTTTTTGTTTTTTG  100

seq1  TTTTTCTATTCATGAATAGAAAGGGAGAACACAAAAGCTAGGCACCTTAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTATTCATGAATAGAAAGGGAGAACACAAAAGCTAGGCACCTTAA  150

seq1  GAGCTGAAGGGGACCTTATAAGCTGACGAGAAATAAGGCTGGCAGAAGGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAAGGGGACCTTATAAGCTGACGAGAAATAAGGCTGGCAGAAGGG  200

seq1  CTCAGGCCACCATTGCTACCAAGTCAGAGCAGTGTAACTCTCTGGCATGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCCACCATTGCTACCAAGTCAGAGCAGTGTAACTCTCTGGCATGC  250

seq1  CAGAAGGCTCTCTAATTAAGTACTGTGGGCGTGTCTGAGGGCTGTGTTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCTCTCTAATTAAGTACTGTGGGCGTGTCTGAGGGCTGTGTTTC  300

seq1  TCAAACTTGTGAGATAACAGAACCATCCTGGGCTCGTTAAATTTTAGCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACTTGTGAGATAACAGAACCATCCTGGGCTCGTTAAATTTTAGCTC  350

seq1  AAGGGAATTTGATTTCATTCTTTTAAACCGAGGTCCCAGGAGGACTCACG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATTTGATTTCATTCTTTTAAACCGAGGTCCCAGGAGGACTCACG  400

seq1  TCCTGAGAAACTGACTAGAGATGAACCTAGAACTCAGGAAGGGTTAAGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGAAACTGACTAGAGATGAACCTAGAACTCAGGAAGGGTTAAGAC  450

seq1  ATGTCAATATTTATCCTAAAGGCAAAATGCTGCCATTCAAGGATCTAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAATATTTATCCTAAAGGCAAAATGCTGCCATTCAAGGATCTAAAG  500

seq1  ACAAGTAACAACTAGATCACATTTGCATCTTAGAAAATTTACAGGCGGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTAACAACTAGATCACATTTGCATCTTAGAAAATTTACAGGCGGGC  550

seq1  TGGAGAAATGGCTCAGTGGGTAAGAGCACTGACTGCTCTTCCAAAGGTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAATGGCTCAGTGGGTAAGAGCACTGACTGCTCTTCCAAAGGTCC  600

seq1  TGAGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCACCCATAATGA  650

seq1  GATCTGACACACTCTTCTGGTGTGTCAGAAGACCGCTACAATGTACTTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGACACACTCTTCTGGTGTGTCAGAAGACCGCTACAATGTACTTAT  700

seq1  GTATAAT-AATAAATAAATCTGCCGGGCGTGGTGGCGCACACCTTTAATC  748
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATAAATAAATAAATCTGCCGGGCGTGGTGGCGCACACCTTTAATC  750

seq1  CCAGCACTTTGGAGGGAGAGGCAGGCAGATTTCTGAGTTCGAGGCTAGCC  798
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCAGCACTTTGGAGGGAGAGGCAGGCATATTTCTGAGTTCGAGGCTAGCC  800

seq1  TGGTCTACAAAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAACCCT  848
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGTCTACAAAGTGAG-TCCAGGACAGCCAGGACTACACAGAGAAACCCT  849

seq1  GTCTCAAAAAACCAAAAATAAATAAATAAATAAATATAATAAATAAATTA  898
      ||||| ||||||||| |||||||||   ||||||||| || |||||  | 
seq2  GTCTC-AAAAACCAATAATAAATAA--TAATAAATAT-ATTAATAA--TT  893

seq1  AAAATAGTAAAAATGATAATAAATAAATCTTTGGGCTGGACTGAGTGGTC  948
      |||||||| |||||||||   |||||||||||||||||||||||||||||
seq2  AAAATAGT-AAAATGATA--TAATAAATCTTTGGGCTGGACTGAGTGGTC  940

seq1  AGAGTTGACCAGAGAGAGCAGAGGTCCTAAAATTCAATACATAAAATAAA  998
      ||||||||||||| |||||||| ||||   |||||| | |      ||||
seq2  AGAGTTGACCAGATAGAGCAGATGTCC--CAATTCATTCC------TAAA  982

seq1  TAAATAAAT  1007
      | |||||||
seq2  T-AATAAAT  990