BAC Information

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BAC

Clone NameB6Ng01-097N16
Chromosome10 (Build37)
Map Location 104,054,096 - 104,054,877
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097N16.bB6Ng01-097N16.g
ACCDH908112DH908113
length1,0721,001
definitionDH908112|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N16, 5' end.DH908113|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttttaatagctgagtagtactcatttgtgtaaatgtacc
acattttctgtatccattcctctgtttaggggcatctgggttctttccag
cttctggctattatatataaggctgctatgaacatagtggagcatctgtc
cttcttacctgttgggacatcttctggatatatgcccaggagaggaattg
tgggatcctctggtagtactatgtccaattttctgaggaaccgccagact
gatttccagagtggctgtacaagcctgcaataccaccaacaatggaggag
tgttcctctttctccacatcctcgccaccatctgctgtcacctgaatttt
tgatcttagccattctgactggtgtgaggtggaatctcagggttgttttg
atttgcatttccctgatgattaaggatgttgaacattttttcaggtgctt
ctctgccattcggtattcctcaggtgagaattctttgttcagttctgagc
cccattttttaatggggttatttgattttctgaagtccacctttttgagt
tctttatatatgttggatattagtcccctatctgatttaggataggtaaa
gatcctttcccaatctgttggtggcctttttgtcttattgacggtgtttt
ttgccttgcagaagcttttgagtttcatgaggtcccatttgtcaatgctc
aatcttacagtacaagccattgctgttctattcaggaatttttcccctgt
gcccatatcttcaaggcttttccccactttctcctctataaagtttcagt
gtctctggttttttgtgaagttcctttgatccacttagatttgaccttta
gtacaaggagataggtatggatccattcattcttctacatgataacaacc
agttgtgccagcaccaagtgttgaaatgctgtcttttttcactggatggt
ttttagcttctttgtcgagatcaaattgaacataggtgtggtgggtttat
ttctgggtcttcaatacctatccatggtctacttggtctggtcactatta
cagtacacatgcagttttatac

gaattcaagacccagaaataaacccacacacctatggtcacttgatcttt
gacaagggagctaaaaccatccagtggaagaaagacagcattttcaaaaa
atggtgctggcacaattggttgttatcatgtagaagaatgagaatcgatc
catttctatctccttgtactaaggtcaaatctaagtggatcaagaaactt
tacataaaaccagagacactgaaacttatagaggagaaagtggagaaaag
ccttgaagatatgggcacaggagaaaaattcctgaatagaacagcaatgg
cttgtgctataagattgagaattgacaaatgggacctcatgaaactacaa
agtttctgcaaggcaaaagacaccgtcaataacacaaaaagaccaccaac
agattgggaaaggatctttacctatcctaaatcagataggggactaatat
ccaatatatataaagaactcaagaaggtggactccactaaatcaaataac
cccatttaaaaatggggctcagaactgaacaaagaattctctcctgagga
gtacagaatggcagagaatcacctgaaaaaatgttcaacatcctcaatca
tcagggaaatgcaaatcaaacaaacctgagattccacctcacaccagtaa
gaatggctaagatcaaaaattcaggtgacagcagatgctggcgaggatgt
ggagaaagaggaacactcctccattgttggtgggatcgcaagcttttaca
accactctggatatcagtttggtggttccttagaaaattggacatagtac
tactggaggatccagcaatacctcttctgggcatatatccagacgatgcc
ccaactggtataggccttttttaatcctaacaataaaatgaaatttaaaa
ataatatttttccacttaatttgtactttttatttaatctaatccctgta
ccataaaatggtttcacctatattgatagtctgtatttctacttcaaata
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054096_104054877
seq2: B6Ng01-097N16.g_88_867 (reverse)

seq1  GTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTGGT  50
      ||||||||||||||||||| | ||||| ||| || ||| |||||||||||
seq2  GTACTATGTCCAATTTTCTAAGGAACCACCAAACTGATATCCAGAGTGGT  50

seq1  TGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCC  100
      |||| |||| ||| ||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAGCTTGCGATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCC  100

seq1  ACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTC  150

seq1  TGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTG  200
      | |||||||||||||||||||||||| ||| |||||||||||||||||||
seq2  TTACTGGTGTGAGGTGGAATCTCAGGTTTG-TTTGATTTGCATTTCCCTG  199

seq1  ATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTA  250
      |||||| ||||||||||||||||||||||||| ||||||||||||| |||
seq2  ATGATTGAGGATGTTGAACATTTTTTCAGGTGATTCTCTGCCATTCTGTA  249

seq1  TTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATAG  300
       |||||||| |||||||||||||||||||||||||||||||||| ||| |
seq2  CTCCTCAGGAGAGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTAAATGG  299

seq1  GGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTG  350
      |||||||||||||  || |||||||||||||||||||||||||||| |||
seq2  GGTTATTTGATTTAGTGGAGTCCACCTTCTTGAGTTCTTTATATATATTG  349

seq1  GATATTAGTCCCCTATCTGAATTAGGATAGGTAAAGATCCTTTCTCAATC  400
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  GATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATC  399

seq1  TGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGC  450
      |||||||||||||||||| ||||||||||||||||||||||||||||| |
seq2  TGTTGGTGGTCTTTTTGTGTTATTGACGGTGTCTTTTGCCTTGCAGAAAC  449

seq1  TTTGCAATTTTATGAGGTCCCATTTATCAACTCTCTATCTTACAGCACAA  500
      |||| | ||| |||||||||||||| |||| |||| |||||| |||||||
seq2  TTTGTAGTTTCATGAGGTCCCATTTGTCAATTCTCAATCTTATAGCACAA  499

seq1  GCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCCATATCTTCGAG  550
      ||||||||||||||||||||||||||||| ||||| ||||||||||| ||
seq2  GCCATTGCTGTTCTATTCAGGAATTTTTCTCCTGTGCCCATATCTTCAAG  549

seq1  GCTTTTCCCTACTTTTTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGT  600
      ||||||| | ||||| ||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGT  599

seq1  GGAGTTCCTTAATCCACTTAGATTTTACCTTAGTACAAGGAGATAGTAAT  650
        |||| ||| |||||||||||||| |||||||||||||||||||| |||
seq2  AAAGTTTCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAGAAAT  649

seq1  TGATCAATTCACAATCTTCTACATGATAACAGCCAGTTGTGCCAGCATGA  700
       |||| |||| || ||||||||||||||||| ||| |||||||||||  |
seq2  GGATCGATTCTCATTCTTCTACATGATAACAACCAATTGTGCCAGCACCA  699

seq1  TTTGTTGAAAATGCTGTCTTTTTTTCCACTGGATAGTTTTAGCTCCCTTG  750
      ||| |||||||||||||| ||| ||||||||||| |||||||||||||||
seq2  TTTTTTGAAAATGCTGTC-TTTCTTCCACTGGATGGTTTTAGCTCCCTTG  748

seq1  TCAAAGATCAAGTGACCATAGGTGTGTGGGTT  782
      ||||||||||||||||||||||||||||||||
seq2  TCAAAGATCAAGTGACCATAGGTGTGTGGGTT  780


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