BAC Information

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BAC

Clone NameB6Ng01-097O08
Chromosome10 (Build37)
Map Location 128,140,951 - 128,336,475
singlet/doubletdoublet
Overlap geneCdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11
Upstream geneMyo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b
Downstream geneCd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097O08.bB6Ng01-097O08.g
ACCDH908144DH908145
length763735
definitionDH908144|Mus musculus domesticus DNA, BAC clone: B6Ng01-097O08, 5' end.DH908145|Mus musculus domesticus DNA, BAC clone: B6Ng01-097O08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,140,951 - 128,141,707)(128,335,909 - 128,336,475)
sequence
tcatagtgatcatctctcagagcagacttacttgacgatattagggtgat
taagttccttaaggagagagatctctcggatggcagtactgggtacacct
tcagtctcacttggagaggttgggaaaacagagacaagaatacggttaca
aacatcattctctcagggatacacaacccccagcccccttaggaaggcag
acaggagaggtgctgtgaggagttaatttctgggtagttagggtgtggct
tttagacatatttaaggccattatttcctctttttccagtgaaaggtaag
aagagcctccaggtgaatgaaaagcagaagaaaggtaataggggagtggg
gtgagagtagctcccggcctcccctgagggccagtgaatctcaactgcca
ttcttttgaaagagagtgagggttctaagtatggtgctggagcagtgagg
agagctctccattcagaaaggaacttttctctggttaccacataacccaa
ctccacgaacagccctggacccctcctatcccgggctcccaccccacaac
tttctcttcccaagtctctcggctagcagatttgggagcacaccggctgg
agcactgcaagaaacttttcccctggattccagccccggacagtctcctc
cggtagagcctccacggtcggccaacccaccgctcgcttcacgcggtccc
tccctccctccccgctacctttccgggtccgggggacgctacccgcctgt
ttggggtaggggg
gaattccaggacagccagggctacacagagaaaccctgtctcgaaaaaca
aaacaaaacaaaacaaaacaaaacaaaaaaaaaaaaaaaaacaaaaaaaa
aaaaaaaagaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaagga
aaggaaaggaaagaactcactatgtagaccaggctggcctcaaactcata
gatatctgcctttctctgcctccctcccaagtgttagaattaaaggtgtg
caccactatgcctgggcatattatctttagacttgtgggaattaaattga
ctttgcttgctgagcagtggtggcacacacctttgatcccaaatactcca
ggggctgaggcaggtggatctttgtgaatttgaggccagcctggtctaca
gagtgagttctagaacagccagagctatacagagaaaccctgtatccaaa
aaaaaaaattgtatttaattaattagttaattaattaaaaataaaacaac
tttgctctgatgggctgagaaggtggctcattggtggatagaattgactg
ctctcccagaggacccatgtgcagtctcacaccaggtggctcacaactgt
cactccatctacaggggatctgacaccctttctgcattccatgggcgcct
tcatcttttctgctgagacagagcacagatgagcttttaatcaatgagac
aaaagcaaagctatgtgtttgctggtaacttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128140951_128141707
seq2: B6Ng01-097O08.b_52_814

seq1  TCATAGTGATCATCTCTCAGAGCAGACTTACTTGACGATATTAGGGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTGATCATCTCTCAGAGCAGACTTACTTGACGATATTAGGGTGAT  50

seq1  TAAGTTCCTTAAGGAGAGAGATCTCTCGGATGGCAGTACTGGGTACACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCCTTAAGGAGAGAGATCTCTCGGATGGCAGTACTGGGTACACCT  100

seq1  TCAGTCTCACTTGGAGAGGTTGGGAAAACAGAGACAAGAATACGGTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTCACTTGGAGAGGTTGGGAAAACAGAGACAAGAATACGGTTACA  150

seq1  AACATCATTCTCTCAGGGATACACAACCCCCAGCCCCCTTAGGAAGGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCATTCTCTCAGGGATACACAACCCCCAGCCCCCTTAGGAAGGCAG  200

seq1  ACAGGAGAGGTGCTGTGAGGAGTTAATTTCTGGGTAGTTAGGGTGTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAGGTGCTGTGAGGAGTTAATTTCTGGGTAGTTAGGGTGTGGCT  250

seq1  TTTAGACATATTTAAGGCCATTATTTCCTCTTTTTCCAGTGAAAGGTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACATATTTAAGGCCATTATTTCCTCTTTTTCCAGTGAAAGGTAAG  300

seq1  AAGAGCCTCCAGGTGAATGAAAAGCAGAAGAAAGGTAATAGGGGAGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCTCCAGGTGAATGAAAAGCAGAAGAAAGGTAATAGGGGAGTGGG  350

seq1  GTGAGAGTAGCTCCCGGCCTCCCCTGAGGGCCAGTGAATCTCAACTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGTAGCTCCCGGCCTCCCCTGAGGGCCAGTGAATCTCAACTGCCA  400

seq1  TTCTTTTGAAAGAGAGTGAGGGTTCTAAGTATGGTGCTGGAGCAGTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGAAAGAGAGTGAGGGTTCTAAGTATGGTGCTGGAGCAGTGAGG  450

seq1  AGAGCTCTCCATTCAGAAAGGAACTTTTCTCTGGTTACCACATAACCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCTCCATTCAGAAAGGAACTTTTCTCTGGTTACCACATAACCCAA  500

seq1  CTCCACGAACAGCCCTGGACCCCTCCTATCCCGGGCTCCCACCCCACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACGAACAGCCCTGGACCCCTCCTATCCCGGGCTCCCACCCCACAAC  550

seq1  TTTCTCTTCCCAAGTCTCTCGGCTAGCAGATTTGGGAGCACACCGGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTCCCAAGTCTCTCGGCTAGCAGATTTGGGAGCACACCGGCTGG  600

seq1  AGCACTGCAAGAAAC-TTTCCCCTGGATTCCAGCCCCGGACAGTCTCCTC  649
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGCACTGCAAGAAACTTTTCCCCTGGATTCCAGCCCCGGACAGTCTCCTC  650

seq1  CGGTAGAGCCTCCACGGTCGGCCAACCCACCGCTCGCTTCACGC-GTCCC  698
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CGGTAGAGCCTCCACGGTCGGCCAACCCACCGCTCGCTTCACGCGGTCCC  700

seq1  TCCCTCCCTCCCCGCTACCTT--CCGGTCC-GGGGACGCTACCCGCCTG-  744
      |||||||||||||||||||||  | ||||| |||||||||||||||||| 
seq2  TCCCTCCCTCCCCGCTACCTTTCCGGGTCCGGGGGACGCTACCCGCCTGT  750

seq1  TTGGGGTAGGGGG  757
      |||||||||||||
seq2  TTGGGGTAGGGGG  763

seq1: chr10_128335909_128336475
seq2: B6Ng01-097O08.g_236_803 (reverse)

seq1  AAAAAAGTAACCAGCAAACACATAGCTTTGCTTTTGTCTCATTGATTAAA  50
      ||| |||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTTACCAGCAAACACATAGCTTTGCTTTTGTCTCATTGATTAAA  50

seq1  TGCTCATCTGTGCTCTGTCTCAGCAG-AAAGATGAAGGCGCCCATGGAAT  99
       ||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGCTCATCTGTGCTCTGTCTCAGCAGAAAAGATGAAGGCGCCCATGGAAT  100

seq1  GCAGAAAGGGTGTCAGATCCCCTGTAGATGGAGTGACAGTTGTGAGCCAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGGGTGTCAGATCCCCTGTAGATGGAGTGACAGTTGTGAGCCAC  150

seq1  CTGGTGTGAGACTGCACATGGGTCCTCTGGGAGAGCAGTCAATTCTATCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGAGACTGCACATGGGTCCTCTGGGAGAGCAGTCAATTCTATCC  200

seq1  ACCAATGAGCCACCTTCTCAGCCCATCAGAGCAAAGTTGTTTTATTTTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGAGCCACCTTCTCAGCCCATCAGAGCAAAGTTGTTTTATTTTTA  250

seq1  ATTAATTAACTAATTAATTAAATACAATTTTTTTTTTTGGATACAGGGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTAACTAATTAATTAAATACAATTTTTTTTTTTGGATACAGGGTT  300

seq1  TCTCTGTATAGCTCTGGCTGTTCTAGAACTCACTCTGTAGACCAGGCTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTATAGCTCTGGCTGTTCTAGAACTCACTCTGTAGACCAGGCTGG  350

seq1  CCTCAAATTCACAAAGATCCACCTGCCTCAGCCCCTGGAGTATTTGGGAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAATTCACAAAGATCCACCTGCCTCAGCCCCTGGAGTATTTGGGAT  400

seq1  CAAAGGTGTGTGCCACCACTGCTCAGCAAGCAAAGTCAATTTAATTCCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGTGTGCCACCACTGCTCAGCAAGCAAAGTCAATTTAATTCCCA  450

seq1  CAAGTCTAAAGATAATATGCCCAGGCATAGTGGTGCACACCTTTAATTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTAAAGATAATATGCCCAGGCATAGTGGTGCACACCTTTAATTCT  500

seq1  AACACTTGGGAGGGAGGCAGAGAAAGGCAGATATCTATGAGTTTGAGGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTGGGAGGGAGGCAGAGAAAGGCAGATATCTATGAGTTTGAGGCC  550

seq1  AGCCTGGTCTACATAGTG  567
      ||||||||||||||||||
seq2  AGCCTGGTCTACATAGTG  568