BAC Information

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BAC

Clone NameB6Ng01-098B08
Chromosome10 (Build37)
Map Location 26,130,361 - 26,131,441
singlet/doubletsinglet
Overlap genenone
Upstream geneEpb4.1l2, 2010003K15Rik, EG667513, LOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208
Downstream geneLOC667572, LOC100040349, Arhgap18, Lama2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098B08.bB6Ng01-098B08.g
ACCDH908273DH908274
length1,0361,077
definitionDH908273|Mus musculus domesticus DNA, BAC clone: B6Ng01-098B08, 5' end.DH908274|Mus musculus domesticus DNA, BAC clone: B6Ng01-098B08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatatgtttttgatcctgttgatgtggaaagaattgtttccttga
tgtccttcatcccctctagctcttagaatctttcctccttctcttccata
gggttccctgagccctaaggggaaggatttgatgggaacaaccaatttag
gactaagtattccatggtctttcactctctgcatattgcctagatgtgag
ttgctgtatttgttcccatgctcctcaggaggaaacttctctgatgatgg
ctgagcaaggcagtgatctatgagtaaaacagaacattattagaagtcat
tcttttagtagaacagtagtgtttggtttcatcctccccccctttactcc
cccccccccacacacacgctcaggatatctagtctcaggttcttagtcac
ccaagcagtgtgaggtatggttcccatttcatagagtgggcctttaactc
aaatcagacattggttggtcactcctacaacctttttgccactattgcac
tagcttatcttgcaagcaggacatcaattgtagatcgtagagtttgaagc
tagattggtgtttatgtttctccattctgtagtgtgcaaagtatcttcct
gtactaaagatggctagcatacaggatgaaggctctatgtgggcaccagc
tcgactttttcatgttagtttgttgtataggtgttgtcttcagcaaaggg
ccttaccaccggtttgtgaatttggattatatgtctataaagtttgtttt
atctgatttagtagtggtatgtgtactggctagttaagtgtgtcatcttg
acacaagctggagttatcacagagaaaggaaccctcccttgaagaaatgt
ctccataagatccagctgtaaggcatttctccatgagtgatcagagtgtg
ataggcccactgttggcggtgcatcctgggctattagccttgtgttcata
agaaaggagctgaccagcccgggccaagaagcaagaagaaattccctcca
ggtctctgctccactccgggttcctgacccgcttga
gaattctgaacttaagaaggagaaccacgaatttttttccataggcatga
gaaaagaacatactcaaacaagaaagacccctgggaatgaaacacaccaa
gttcttgcagagaaaggaaaatttgttgtcaacattcggtggattaagat
attgtactggctggttttgtgtgtcaacttgacacagccggagttatcac
agagaaaggagcttcagttgaggaaatgcctccatgagatccaactgtaa
ggcattttctcaattagtgatcaaggaggaaaggccccttgtgggttgga
ccatctcggggctggtagtcttgggttctataagagagcatgctgagcaa
gccaggagcaagcaagccagtaaggaacatccctccatggtctctgcatc
agttcctgctttctgacctgcttgagttccagtcctgacttcctttagtg
atgaacagcagtatggaaatgtaagccaaataaaccctttcctccccaac
ttgcttcttggtcatgatgtttgtgcaggaatagaaaccctgactaagac
agatatgaattaagagccaggtgtggtggtgcacgcctttaatcccagca
ctcgggaggcaggggcaggcagatttctgagtttgagaccaacctggtct
acaacttgagttccaggacagccagggctatacagagaaagaaccctgtc
tcgaactccccccccccccccaaaaaaaaaggatatgaattaaattttaa
aaatctgaaaaggacttggggatacagttgtaatgcccttgttcagctca
tgcaaggccttgggttcaattcctagtaccgtgggaagatgccaacaaca
aaagtgtaacttgggagagagttggggggaagaatagatgctgagtcctt
ttctagtttctctgtagaatacagcaaacaggtcaaatcaccacagcaaa
gtgctgatgatgttaaaaataaaccacagtcatcacacgcgtgatgtgag
aggtgaggcacaaggagctgacatcattgcttctcgagcgtgacagtgga
cactgcctaaaactaagtgtttagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26130361_26131441
seq2: B6Ng01-098B08.g_66_1142

seq1  GAATTCTGAACTTAAGAAGGAGAACCACGAATTTTTTTCCATAGGCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACTTAAGAAGGAGAACCACGAATTTTTTTCCATAGGCATGA  50

seq1  GAAAAGAACATACTCAAACAAGAAAGACCCCTGGGAATGAAACACACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAACATACTCAAACAAGAAAGACCCCTGGGAATGAAACACACCAA  100

seq1  GTTCTTGCAGAGAAAGGAAAATTTGTTGTCAACATTCGGTGGATTAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGCAGAGAAAGGAAAATTTGTTGTCAACATTCGGTGGATTAAGAT  150

seq1  ATTGTACTGGCTGGTTTTGTGTGTCAACTTGACACAGCCGGAGTTATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTGGCTGGTTTTGTGTGTCAACTTGACACAGCCGGAGTTATCAC  200

seq1  AGAGAAAGGAGCTTCAGTTGAGGAAATGCCTCCATGAGATCCAACTGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGGAGCTTCAGTTGAGGAAATGCCTCCATGAGATCCAACTGTAA  250

seq1  GGCATTTTCTCAATTAGTGATCAAGGAGGAAAGGCCCCTTGTGGGTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTTCTCAATTAGTGATCAAGGAGGAAAGGCCCCTTGTGGGTTGGA  300

seq1  CCATCTCGGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCATGCTGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCGGGGCTGGTAGTCTTGGGTTCTATAAGAGAGCATGCTGAGCAA  350

seq1  GCCAGGAGCAAGCAAGCCAGTAAGGAACATCCCTCCATGGTCTCTGCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAGCAAGCAAGCCAGTAAGGAACATCCCTCCATGGTCTCTGCATC  400

seq1  AGTTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTAGTG  450

seq1  ATGAACAGCAGTATGGAAATGTAAGCCAAATAAACCCTTTCCTCCCCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGCAGTATGGAAATGTAAGCCAAATAAACCCTTTCCTCCCCAAC  500

seq1  TTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACTAAGAC  550

seq1  AGATATGAATTAAGAGCCAGGTGTGGTGGTGCACGCCTTTAATCCCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGAATTAAGAGCCAGGTGTGGTGGTGCACGCCTTTAATCCCAGCA  600

seq1  CTCGGGAGGCAGGGGCAGGCAGATTTCTGAGTTTGAGACCAACCTGGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGAGGCAGGGGCAGGCAGATTTCTGAGTTTGAGACCAACCTGGTCT  650

seq1  ACAACTTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAAGAACCCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAAGAACCCTGTC  700

seq1  TCGAACTCCCCCCCCCCCCCCCAAAAAAAAGGATATGAATTAAATTTTAA  750
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCGAACTCCCCCCCCCCCCCCAAAAAAAAAGGATATGAATTAAATTTTAA  750

seq1  AAATCTGAAAAGGACTTGGGGATACAGTTGTAATGCCCTTGTTCAGCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAAAAGGACTTGGGGATACAGTTGTAATGCCCTTGTTCAGCTCA  800

seq1  TGCAAGGCCTTGGGTTCAATTCCTAGTACCGTGGGAAGATGCCAACAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGCCTTGGGTTCAATTCCTAGTACCGTGGGAAGATGCCAACAACA  850

seq1  AAAGTGTAACTTGGAGAAGAGTT-GGTGGAAGAATAGATGCTGAGTCCTT  899
      ||||||||||||||   |||||| || |||||||||||||||||||||||
seq2  AAAGTGTAACTTGGGAGAGAGTTGGGGGGAAGAATAGATGCTGAGTCCTT  900

seq1  ATCTAG-TTCTCTGTAGAATACAAGCAAACAGGTCAAATCACCACAGCAA  948
       ||||| ||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCTAGTTTCTCTGTAGAATAC-AGCAAACAGGTCAAATCACCACAGCAA  949

seq1  AGTGCTGATGATGTAAAAATAAAACCACAGTCATCACACGCGTGATGTGA  998
      |||||||||||||| ||||  |||||||||||||||||||||||||||||
seq2  AGTGCTGATGATGTTAAAAATAAACCACAGTCATCACACGCGTGATGTGA  999

seq1  GAGGTGAGGCACAAAGAGCTGACATCATTGCCTCTCAGAGCCGTGAACAA  1048
      |||||||||||||| |||||||||||||||| |||| ||| |||||   |
seq2  GAGGTGAGGCACAAGGAGCTGACATCATTGCTTCTC-GAG-CGTGA--CA  1045

seq1  GTGGACACTGCCTAAAACTAAAGTGTTTAGCTG  1081
      ||||||||||||||||||| |||||||||||||
seq2  GTGGACACTGCCTAAAACT-AAGTGTTTAGCTG  1077