BAC Information

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BAC

Clone NameB6Ng01-098G24
Chromosome10 (Build37)
Map Location 30,645,330 - 30,646,488
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2
Downstream geneLOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098G24.bB6Ng01-098G24.g
ACCDH908530DH908531
length1,2221,156
definitionDH908530|Mus musculus domesticus DNA, BAC clone: B6Ng01-098G24, 5' end.DH908531|Mus musculus domesticus DNA, BAC clone: B6Ng01-098G24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagtacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaaattgctccttctaattcgttgaagaattgagttggaattt
taatgggggattgcattgaatctgtagattgcttttggcaagatagccat
ttttacaatgttggtcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttctttaatttctttctttcagggacttgaagtttttatc
atacagatctttcacttccttcgttagagtcacgccgagatatttatatt
tatttggtgctatgagaaagggtgttgtttccctaatttcctttcctcag
cctgtttattcctttgtgtagagaaaaggccatggacttgtttggagtta
attttatattccagcttacttcaccgaagcctgttatctgggtttagaga
gtttctctgttggaaatttttaaggtacactctattatcctaccatacta
cactctgtcaaaaagagcattattgctagaacacatctcacctctcgcta
tccgctttattctccactaact
gaattctctttataagttacaaaattgtgcataaacatcatgtgaaaatg
ttgaatataaagaaagacatcaggttctttggaccaagaactttatacct
ttgtaaaatatctgtgacaccaccttaaataagccatgaccagagtacta
gacacagatatttaaggcctttgcttccttctttcatatgttggagcttt
tcagctgagcacactgattaacactggcagtgggtatggtccatgctgtt
tgtcagagatacttgacaaactcttctcccttttaaaggttgaaaggcac
acaacttggtaggtaattcactttcattgttggaaagggaagtgaatcaa
aatacaaacaagagcagatgcacatgtttttctggatagatatttccatt
ctgagaaccacacagaggcttgcataactgtgtaatttacataaggttgt
ttttcaggagagctgcctacagatagctggtcagttgtggacacttgagt
ttgttctgaagctggagaatagtccaattcgtacgggagtggcatttctt
atatctagccaaaacttactcataaaaatcaagatgccaagatactatat
tcttgttagccatggaaacaatccctgtttatttgaaatttctgtaattt
tatttagatttattttattttattttattttattttgttttatgtgtatg
agtgttttgcccacacatatgtatatgccttgtacctaaggggtgagaag
agaatcccctagatctcgagacagatttgtaagctcccatgtgggtgcta
gggtcaaacccaggttcttctgcaagagcaacaggtactcaactgctgag
ccatctctctagcccctgtgattttattagaaacaaagaaacaaacatgt
tgtactgacaggaaagaaatgtatttatagactttagatcatctctctca
gagtggtcagtttctcagattctcactgggctcatttctaccctacacat
gggatctcatgtatatcaagtgccaggttagaggtaactatatagaagct
tttgtctgtaatgaagggccaagaaattccaaggtaacaacttacttctc
gcaagttccagtttcctccttctcacttagaattcctttgaacttcaact
aaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_30645330_30646488
seq2: B6Ng01-098G24.g_69_1224

seq1  GAATTCTCTTTATAAGTTACAAAATTGTGCATAAACATCATGTGAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTATAAGTTACAAAATTGTGCATAAACATCATGTGAAAATG  50

seq1  TTGAATATAAAGAAAGACATCAGGTTCTTTGGACCAAGAACTTTATACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATAAAGAAAGACATCAGGTTCTTTGGACCAAGAACTTTATACCT  100

seq1  TTGTAAAATATCTGTGACACCACCTTAAATAAGCCATGACCAGAGTACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAATATCTGTGACACCACCTTAAATAAGCCATGACCAGAGTACTA  150

seq1  GACACAGATATTTAAGGCCTTTGCTTCCTTCTTTCATATGTTGGAGCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGATATTTAAGGCCTTTGCTTCCTTCTTTCATATGTTGGAGCTTT  200

seq1  TCAGCTGAGCACACTGATTAACACTGGCAGTGGGTATGGTCCATGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGAGCACACTGATTAACACTGGCAGTGGGTATGGTCCATGCTGTT  250

seq1  TGTCAGAGATACTTGACAAACTCTTCTCCCTTTTAAAGGTTGAAAGGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGATACTTGACAAACTCTTCTCCCTTTTAAAGGTTGAAAGGCAC  300

seq1  ACAACTTGGTAGGTAATTCACTTTCATTGTTGGAAAGGGAAGTGAATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGGTAGGTAATTCACTTTCATTGTTGGAAAGGGAAGTGAATCAA  350

seq1  AATACAAACAAGAGCAGATGCACATGTTTTTCTGGATAGATATTTCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAACAAGAGCAGATGCACATGTTTTTCTGGATAGATATTTCCATT  400

seq1  CTGAGAACCACACAGAGGCTTGCATAACTGTGTAATTTACATAAGGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACCACACAGAGGCTTGCATAACTGTGTAATTTACATAAGGTTGT  450

seq1  TTTTCAGGAGAGCTGCCTACAGATAGCTGGTCAGTTGTGGACACTTGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGAGAGCTGCCTACAGATAGCTGGTCAGTTGTGGACACTTGAGT  500

seq1  TTGTTCTGAAGCTGGAGAATAGTCCAATTCGTACGGGAGTGGCATTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGAAGCTGGAGAATAGTCCAATTCGTACGGGAGTGGCATTTCTT  550

seq1  ATATCTAGCCAAAACTTACTCATAAAAATCAAGATGCCAAGATACTATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTAGCCAAAACTTACTCATAAAAATCAAGATGCCAAGATACTATAT  600

seq1  TCTTGTTAGCCATGGAAACAATCCCTGTTTATTTGAAATTTCTGTAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTAGCCATGGAAACAATCCCTGTTTATTTGAAATTTCTGTAATTT  650

seq1  TATTTAGATTTATTTTATTTTATTTTATTTTATTTTGTTTTATGTGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGATTTATTTTATTTTATTTTATTTTATTTTGTTTTATGTGTATG  700

seq1  AGTGTTTTGCCCACACATATGTATATGCCTTGTACCTAAGGGGTGAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTGCCCACACATATGTATATGCCTTGTACCTAAGGGGTGAGAAG  750

seq1  AGAATCCCCTAGATCTCGAGACAGA-TTGTAAGCTCCCATGTGGGTGCTA  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGAATCCCCTAGATCTCGAGACAGATTTGTAAGCTCCCATGTGGGTGCTA  800

seq1  GGGTCAAACCCAGG-TCTTCTGCAAGAGCAACAGGTACTCAACTGCTGAG  848
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGGTCAAACCCAGGTTCTTCTGCAAGAGCAACAGGTACTCAACTGCTGAG  850

seq1  CCATCTCTCTAGCCCCTGTGATTTTAATTAGAAACAAAGAAACAAACATG  898
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCATCTCTCTAGCCCCTGTGATTTT-ATTAGAAACAAAGAAACAAACATG  899

seq1  TTGTACTGACAGGAAAGAAATGTATTTATAGACTTTAGATCATCTCTCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTGACAGGAAAGAAATGTATTTATAGACTTTAGATCATCTCTCTC  949

seq1  AGAGTGGTCAGGTTTCTCAGATTCTCACTGGGCTCATTTCTACCCTACAC  998
      |||||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  AGAGTGGTCA-GTTTCTCAGATTCTCACTGGGCTCATTTCTACCCTACA-  997

seq1  CATGGGATCTCATGTATATCAAGTGCCA-GTTAGAGGTAACTATATAGAA  1047
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATGGGATCTCATGTATATCAAGTGCCAGGTTAGAGGTAACTATATAGAA  1047

seq1  GGCTTTTGTCTGTAATGAAGGGGCAGGAAA-TCCAAGGTAACAAC-TACT  1095
       ||||||||||||||||||||| || |||| |||||||||||||| ||||
seq2  -GCTTTTGTCTGTAATGAAGGGCCAAGAAATTCCAAGGTAACAACTTACT  1096

seq1  TCCCAACAAG-TCCAGTTTTCTCTCTTCTCACTAAGATATTCCTTTGAAA  1144
      || |  |||| |||||||| ||| ||||||||| ||| ||||||||| ||
seq2  TCTC-GCAAGTTCCAGTTTCCTC-CTTCTCACTTAGA-ATTCCTTTG-AA  1142

seq1  CTTCAACCTAAAGGG  1159
      |||||| ||||||||
seq2  CTTCAA-CTAAAGGG  1156