BAC Information

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BAC

Clone NameB6Ng01-098K09
Chromosome10 (Build37)
Map Location 104,053,468 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098K09.bB6Ng01-098K09.g
ACCDH908680DH908681
length1,183954
definitionDH908680|Mus musculus domesticus DNA, BAC clone: B6Ng01-098K09, 5' end.DH908681|Mus musculus domesticus DNA, BAC clone: B6Ng01-098K09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgttcagttctgagccccattttttaagggggttatttgat
tttctgaggtccaccttcttgagttctttatatatgttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccagtctgttggtggtc
tttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataagtatggatcgattcg
cattcttctacatgataacaaccagttgtgccagcaccaattgttgaaaa
tgctgtctttcttccactggatggttttggctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtccacttgtctgtctctataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatccttggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
taatggggattgcattgaatctgtagattgcttttggcaagatagccatt
ttacaatgttggtcctgccaatccatgagcatgggagatctttcatcttc
tgagatcttctttatttctttcttcaggacttgaagtttttatcatacag
atctttcactttctttcgttagagtcacgccgagatattttatattattt
gtggctattgagaaaggtgttgtttccctatttctttcctcagcctgttt
attctttgtgtagagaagtcattgacttgttgagttaatttataccagct
actcacgaagcttgtttatccagttagagtctcggttgaattttagggtc
actttataacatattaatccggcaaaaggtaaatttgacttcccttttcc
atggtgtacccttgaatcctttggtgcaaattg

gaattctcacctgaggaatacagaatggctgagaaacacctgaaaaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccatctcacaccagccagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttgtt
gggattgcaagttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatggtactattagaggatcctgcaatacctctcctgggc
atatatccagaagattttccaactagtaagaaagaaacatcctccactat
gttcatagcagccttatttataatagccagcagctggaaagaacccagat
ggccctcaacagaggaatggatacaaaaatgtggtacatttacacaatgg
agtactactcatctactaaaaagaataaatttatgaaactcctaggcaaa
tgttggacctggaaagcattatgctgagtgaggtaacccaatcacaaaat
tactcaaatgatatgtactcactgataagtagatattagcccagatactt
agaatacccaatatataagttacaatttgcaaaacacatcaaactcaaga
agaatgaagaccaaagtgtggacactttgccccatcataattttgcttac
caatgttataactctcctcacacctagtcttagatggcagcttagaagtc
attatctttatggtccatgttgataacactaatcaactctcaattacagt
gtttaacaccagcaaatattccttcattctggcacacttgttttcttaaa
tgcacttgacatgtacatgaccttaaattgcaggcaacctgacaacttgt
tctttgtcaactatataactactgtgcttacagagtattcattatacttc
ttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053468_104054363
seq2: B6Ng01-098K09.g_68_750 (reverse)

seq1  GGGGCAAAGTGTCCACACTTTGGTCTTCGTTC-TCTTGAGTTTAATGTGT  49
      |||||||||||||||||||||||||||| ||| |||||||||| ||||||
seq2  GGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTGAGTTTGATGTGT  50

seq1  TTAGCAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGCTAATA  99
      || |||||||||| ||||||| |||||||| |||||| ||||||||||||
seq2  TTTGCAAATTGTAACTTATATATTGGGTATTCTAAGTATCTGGGCTAATA  100

seq1  TCCACTTATCAGTGAGTACATATTGCGCGAGTTCCTTTGTGATTGGGTTA  149
      || ||||||||||||||||||||     ||||   |||||||||||||||
seq2  TCTACTTATCAGTGAGTACATATCATTTGAGTAATTTTGTGATTGGGTTA  150

seq1  CCGCACTCAGGATGATACTCTCCAGGTCCATCCATTTGCCTAGGAATTTC  199
      || ||||||| || || || ||||||||||  ||||||||||||| ||||
seq2  CCTCACTCAGCATAATGCTTTCCAGGTCCA-ACATTTGCCTAGGAGTTTC  199

seq1  ATAAATTCATTCTTTTTAATAGCTCCATTTACATTTAATTTAATTAATGT  249
      ||||||| |||||||||| |||                            
seq2  ATAAATTTATTCTTTTTAGTAG----------------------------  221

seq1  AATTACAATTAATTAATTTATTAATTAAATAATTTAATAATTTAATTGAT  299
                                                        
seq2  --------------------------------------------------  221

seq1  AAATTAATTTAATTAATTAATTTAATTAATTAAATTAAATAATAATTTAA  349
                                                        
seq2  --------------------------------------------------  221

seq1  TAATAAATTAAATATTTTAAAATTAATAATAATTTTATAAGTAAATAATT  399
                                          || ||||       
seq2  ------------------------------------ATGAGTA-------  228

seq1  TAATTAATGTAATTTAATTAATGTAATTACATTACATTTAATAGCTCCAT  449
                            |||                   ||||||
seq2  ----------------------GTA-------------------CTCCAT  237

seq1  TGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGGGCATC  499
      ||||||||||||||||||||| |||||| |||||||||||||||| ||||
seq2  TGTGTAAATGTACCACATTTT-TGTATCCATTCCTCTGTTGAGGGCCATC  286

seq1  TGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATATA  549
      |||||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  TGGGTTCTTTCCAGCTGCTGGCTATTATAAATAAGGCTGCTATGAACATA  336

seq1  GTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATGCC  599
      |||||| |||| || |||||||  |||||   ||||||||||||||||||
seq2  GTGGAGGATGTTTCTTTCTTACTAGTTGGAAAATCTTCTGGATATATGCC  386

seq1  CAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGA  649
      ||| ||||||||||| ||||||||   |||||| ||||||||||||||||
seq2  CAGGAGAGGTATTGCAGGATCCTCTAATAGTACCATGTCCAATTTTCTGA  436

seq1  CGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCAC  699
       ||||| |||||| |||||||||||||||||||||| | |||||||||| 
seq2  GGAACCACCAGACTGATTTCCAGAGTGGTTGTACAA-CTTGCAATCCCAA  485

seq1  CAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCT  535

seq1  GTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATC  799
      ||||||||||||||||||||||||||||||| |||||||||| |||||||
seq2  GTCACCTGAATTTTTGATCTTAGCCATTCTGGCTGGTGTGAGATGGAATC  585

seq1  TCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACA-  848
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  TCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGCTGAACAT  635

seq1  TTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  896
      |||||||||||| ||||| ||||||| |||||||||||||||||||||
seq2  TTTTTTCAGGTGTTTCTCAGCCATTCTGTATTCCTCAGGTGAGAATTC  683


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