BAC Information

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BAC

Clone NameB6Ng01-098P22
Chromosome10 (Build37)
Map Location 92,639,011 - 92,790,621
singlet/doubletdoublet
Overlap geneEG667314, Pctk2, Elk3, LOC100041854
Upstream geneLOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
Downstream geneLta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338, LOC100041907, Usp44, Metap2, Vezt, Fgd6, Nr2c1, Ndufa12, EG215472, LOC100041955
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098P22.bB6Ng01-098P22.g
ACCDH908915DH908916
length618979
definitionDH908915|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P22, 5' end.DH908916|Mus musculus domesticus DNA, BAC clone: B6Ng01-098P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,639,011 - 92,639,628)(92,789,642 - 92,790,621)
sequence
gaattctttgtttttgccctctgcggtgaagtttctgttttctttaagta
cattactttttattatttggaagtttgaaaagcacacagaatatagtttg
atcatactcaacccatctacctcttcccctgtcaatttcctgtttctcta
tgtgtgtgtctctatgtctctgtctcttaaataggccactgagtccaatt
cccgctgcccatttaaacacgggtgtggtccatctaatggagcaaggtgg
acctaccagggccacacccttaaagtaaatgactagcattgcgaagcttc
tgtttacacatttagattttaagttctaaatacttcagttagtcctttag
tgtccttggcatttacatcttttattattactattacatctgtggatctg
tggtggtggggaaaaaagaggggcatgtagggatgtcagggggcgcttgg
gggactgttatccccgtccatcatgagagtccccgggaactagctcaggt
tatcagatttttactgaagagtcatctttctagccccttgaagcatttta
aacgttcatgcatttactcttttttttttttagattcatttttaaattat
gtgagtggggggtgggta
gaattcactttgtagaccaggcttgcctcgaactcagaaatctgcctgtc
tctgcctcccaaatgctgggattaaaggcgtgtgccaccactgcctggcg
ccagatgagatctcaagcaagcagccatccacaaatgcagtgacttggaa
aagagtaacaaaaaacagaaagtggggaggctggaggtataaggtccaaa
cctgccatttttggtgcctttgaacacaaatgaagatagtttagctgtcc
tgggcctggggttttcatttattccatgtttgcttatttgctttaccctc
accatcaccggacgccaaaggcagataaaaaaataggaatggattcctcg
tgtttctgcaaaccagaaaaaccactatgaatgtgccagtgtatcatgta
ggtcttcttgttacatgacatcactgcacaaagagagaggtgggcggagc
aaggtgcttcttcaagaacctactttggcaattaaaagaaaaaaaaatcc
acccatgagcacagagccctcacaacctgatcacttcaggaaagttcaga
ctctcaaaggtattggcagggaaccagattcctatcacaaaccttaaagg
ctgtgttgaaacccgtagcagctccttctcctgaataaaggagctgtact
aagtagtccctggcaaccttgacattcagtggctccgtaaactcatccga
gtaaatcgtgagacaaaatatactgttagttgtgaagtaggtggtgtgac
caagaggcctgcagattgccaaataggagcttggctgcaagtggaggtgg
ctcccctccccccgccaaccctgaccctggagtagataggtccagagaag
gggatgccaggtaggaaacagagtcattactcagctgttagggtcaatct
taaaagacaggctttgtgaagaagaaaaactactgtgtacgagctgttgc
tggtcacgggggaggggggagaggaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_92639011_92639628
seq2: B6Ng01-098P22.b_48_665

seq1  GAATTCTTTGTTTTTGCCCTCTGCGGTGAAGTTTCTGTTTTCTTTAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTTTGCCCTCTGCGGTGAAGTTTCTGTTTTCTTTAAGTA  50

seq1  CATTACTTTTTATTATTTGGAAGTTTGAAAAGCACACAGAATATAGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTTTTTATTATTTGGAAGTTTGAAAAGCACACAGAATATAGTTTG  100

seq1  ATCATACTCAACCCATCTACCTCTTCCCCTGTCAATTTCCTGTTTCTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACTCAACCCATCTACCTCTTCCCCTGTCAATTTCCTGTTTCTCTA  150

seq1  TGTGTGTGTCTCTATGTCTCTGTCTCTTAAATAGGCCACTGAGTCCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTCTCTATGTCTCTGTCTCTTAAATAGGCCACTGAGTCCAATT  200

seq1  CCCGCTGCCCATTTAAACACGGGTGTGGTCCATCTAATGGAGCAAGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTGCCCATTTAAACACGGGTGTGGTCCATCTAATGGAGCAAGGTGG  250

seq1  ACCTACCAGGGCCACACCCTTAAAGTAAATGACTAGCATTGCGAAGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCAGGGCCACACCCTTAAAGTAAATGACTAGCATTGCGAAGCTTC  300

seq1  TGTTTACACATTTAGATTTTAAGTTCTAAATACTTCAGTTAGTCCTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACACATTTAGATTTTAAGTTCTAAATACTTCAGTTAGTCCTTTAG  350

seq1  TGTCCTTGGCATTTACATCTTTTATTATTACTATTACATCTGTGGATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGGCATTTACATCTTTTATTATTACTATTACATCTGTGGATCTG  400

seq1  TGGTGGTGGGGAAAAAAGAGGGGCATGTAGGGATGTCAGGGGGCGCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTGGGGAAAAAAGAGGGGCATGTAGGGATGTCAGGGGGCGCTTGG  450

seq1  GGGACTGTTATCCCCGTCCATCATGAGAGTCCCCGGGAACTAGCTCAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGTTATCCCCGTCCATCATGAGAGTCCCCGGGAACTAGCTCAGGT  500

seq1  TATCAGATTTTTACTGAAGAGTCATCTTTCTAGCCCCTTGAAGCATTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGATTTTTACTGAAGAGTCATCTTTCTAGCCCCTTGAAGCATTTTA  550

seq1  AACGTTCATGCATTTACTCTTTTTTTTTTTTAGATTCATTTTTAAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTCATGCATTTACTCTTTTTTTTTTTTAGATTCATTTTTAAATTAT  600

seq1  GTGAGTGGGGGGTGGGTA  618
      ||||||||||||||||||
seq2  GTGAGTGGGGGGTGGGTA  618

seq1: chr10_92789642_92790621
seq2: B6Ng01-098P22.g_68_1046 (reverse)

seq1  TGTTTCCTCT-CCCCCTCCCCCGTGACCAGCAACAGCTCGTACACAGTAG  49
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTCTCCCCCCTCCCCCGTGACCAGCAACAGCTCGTACACAGTAG  50

seq1  TTTTTCTTCTTCACAAAGCCTGTCTTTTAAGATTGACCCTAACAGCTGAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCTTCACAAAGCCTGTCTTTTAAGATTGACCCTAACAGCTGAG  100

seq1  TAATGACCTCTGTTTCCTACCTGGCATCCACCTTCTCTGGACCTATCTAC  149
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  TAATGA-CTCTGTTTCCTACCTGGCATCC-CCTTCTCTGGACCTATCTAC  148

seq1  TCCAGGGTCAGGGTTGGCGGGGGGAGGGGAGCCACCTCCACTTGCAGCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGTCAGGGTTGGCGGGGGGAGGGGAGCCACCTCCACTTGCAGCCA  198

seq1  AGCTCCTATTTGGCAATCTGCAGGCCTCTTGGTCACACCACCTACTTCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTATTTGGCAATCTGCAGGCCTCTTGGTCACACCACCTACTTCAC  248

seq1  AACTAACAGTATATTTTGTCTCACGATTTACTCGGATGAGTTTACGGAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACAGTATATTTTGTCTCACGATTTACTCGGATGAGTTTACGGAGC  298

seq1  CACTGAATGTCAAGGTTGCCAGGGACTACTTAGTACAGCTCCTTTATTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATGTCAAGGTTGCCAGGGACTACTTAGTACAGCTCCTTTATTCA  348

seq1  GGAGAAGGAGCTGCTACGGGTTTCAACACAGCCTTTAAGGTTTGTGATAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGGAGCTGCTACGGGTTTCAACACAGCCTTTAAGGTTTGTGATAG  398

seq1  GAATCTGGTTCCCTGCCAATACCTTTGAGAGTCTGAACTTTCCTGAAGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGGTTCCCTGCCAATACCTTTGAGAGTCTGAACTTTCCTGAAGTG  448

seq1  ATCAGGTTGTGAGGGCTCTGTGCTCATGGGTGGATTTTTTTTTCTTTTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTTGTGAGGGCTCTGTGCTCATGGGTGGATTTTTTTTTCTTTTAA  498

seq1  TTGCCAAAGTAGGTTCTTGAAGAAGCACCTTGCTCCGCCCACCTCTCTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAAGTAGGTTCTTGAAGAAGCACCTTGCTCCGCCCACCTCTCTCT  548

seq1  TTGTGCAGTGATGTCATGTAACAAGAAGACCTACATGATACACTGGCACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAGTGATGTCATGTAACAAGAAGACCTACATGATACACTGGCACA  598

seq1  TTCATAGTGGTTTTTCTGGTTTGCAGAAACACGAGGAATCCATTCCTATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGTGGTTTTTCTGGTTTGCAGAAACACGAGGAATCCATTCCTATT  648

seq1  TTTTTATCTGCCTTTGGCGTCCGGTGATGGTGAGGGTAAAGCAAATAAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCTGCCTTTGGCGTCCGGTGATGGTGAGGGTAAAGCAAATAAGC  698

seq1  AAACATGGAATAAATGAAAACCCCAGGCCCAGGACAGCTAAACTATCTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGAATAAATGAAAACCCCAGGCCCAGGACAGCTAAACTATCTTC  748

seq1  ATTTGTGTTCAAAGGCACCAAAAATGGCAGGTTTGGACCTTATACCTCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTCAAAGGCACCAAAAATGGCAGGTTTGGACCTTATACCTCCA  798

seq1  GCCTCCCCACTTTCTGTTTTTTGTTACTCTTTTCCAAGTCACTGCATTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCCACTTTCTGTTTTTTGTTACTCTTTTCCAAGTCACTGCATTTG  848

seq1  TGGATGGCTGCTTGCTTGAGATCTCATCTGGCGCCAGGCAGTGGTGGCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGCTGCTTGCTTGAGATCTCATCTGGCGCCAGGCAGTGGTGGCAC  898

seq1  ACGCCTTTAATCCCAGCATTTGGGAGGCAGAGACAGGCAGATTTCTGAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTTTAATCCCAGCATTTGGGAGGCAGAGACAGGCAGATTTCTGAGT  948

seq1  TCGAGGCAAGCCTGGTCTACAAAGTGAATTC  980
      |||||||||||||||||||||||||||||||
seq2  TCGAGGCAAGCCTGGTCTACAAAGTGAATTC  979