BAC Information

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BAC

Clone NameB6Ng01-099G22
Chromosome10 (Build37)
Map Location 89,738,414 - 89,877,915
singlet/doubletdoublet
Overlap geneAnks1b
Upstream geneGas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, LOC100043039, LOC544719
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099G22.bB6Ng01-099G22.g
ACCDH909226DH909227
length8801,063
definitionDH909226|Mus musculus domesticus DNA, BAC clone: B6Ng01-099G22, 5' end.DH909227|Mus musculus domesticus DNA, BAC clone: B6Ng01-099G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,877,036 - 89,877,915)(89,738,414 - 89,739,474)
sequence
gaattcatttgccatgttaaaaacaaaatgtacttgctgtctttttctaa
gaatcaccgggctgaggtcatgaaatggcaatcatgggataatcaaaaca
gaacttggggtacatgactgaattgatatacaaataaaagactgggcttt
tggtctgcatgagatgagatagtagagagtgacagaaattattttttaga
atttttttctagtaaatgctgagctgtctagagatctctggagaatgaat
atattgttcttttaaaaatttgttttctaacaggatttctgaccttggtc
agaaatactaaaaattacttagagagctaacatagctcttttagaatatt
ttctagcagctacctagagggaacttcttggaaaatgagcatagctttaa
tagaatttttctagaaaatctaagaatattttatagcagcttttctgact
ttggtcagaaaacccatgagctatccggagagtttttagaaatttttcta
gcatgaaacagcagaaagttatctcaaatagactgcagagccaagagcta
tctacagagagctgtttagggagtcatttcaagcagactacacggctgtc
agcttgcacccaatcatttgactttgagtcatttctttcactacttgcaa
taccccttcctcaggacccccaactaagcagaggctggtccttggcagct
gttgttttggtttttttttttttgtttgttgttttgttttaacttggagt
tctgcaaattagagccaggttctttgcttgcaatgtaaacactgtactaa
gtgaacttctggcctgataaaataggattttgccataatatgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattccagacaacccagaagtcaaaatgaatgacggtaaagtaataatg
attcatctgaagggaagggtcactgaagacgtgaaaacatgcttgttgtg
ggttttgttttgtcttgagactgggtaccgtgtatcccagtgtattagtc
aaggttctctagagtcacagaacttatggacagtctctagataataaagg
aatttattgatgacttacagtcggcagcccaattcccaacaatgattcag
tcgcagctgtgaatggaagtccaaggatctagcagttactcagcctcacg
cagcaagcaggcgaaggagcaagagcaagagctagactcccttcttccaa
tgtccttatattgtctccagcagaaggtgtagcccagattaaaggtgtgt
tccaccacacccttaatcccagatgaaaggcgtagcccagattaaaggtg
tgttccttaaactcggagattcaatcttctggaatccatagccactatgg
ctcaagatcttcaaaccaagatccagataaggatctccaagcctccagat
aagggtcactggtgagccttccaattccggattgtagttcattccaaata
ttgtcaagttgacaaccaggaataaccactacacccagatttgcctgaaa
cttcctgtggctgaggatgctcttgaacttccaatccttctgtctgtccc
tcctgagtgaggcttgcagaagtacatgtgatttgtgtggagctggggga
atggaacccagagcttcatgcatgctagacaacgctgcccactgagcgac
tctccattcccaaagacaatgcttttgagtgaggattatacagatttctt
gctatggcacatgttacctttcaatagatacctgttgagtgaatcagtgt
atacttcccttgaatgccattcagtgatattattatgcacatgtccaaat
ggggaaaccagaaagatgtacattgcaacactgtctttcatggtaagatt
acatgtgatgtaattagtttttgcatatttttgatatctccaaaattaat
gaaattaaatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_89877036_89877915
seq2: B6Ng01-099G22.b_48_927 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACATATTATGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACATATTATGGCA  50

seq1  AAATCCTATTTTATCAGGCCAGAAGTTCACTTAGTACAGTGTTTACATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTATTTTATCAGGCCAGAAGTTCACTTAGTACAGTGTTTACATTG  100

seq1  CAAGCAAAGAACCTGGCTCTAATTTGCAGAACTCCAAGTTAAAACAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAAGAACCTGGCTCTAATTTGCAGAACTCCAAGTTAAAACAAAAC  150

seq1  AACAAACAAAAAAAAAAAAACCAAAACAACAGCTGCCAAGGACCAGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAAAAAAAAAAAACCAAAACAACAGCTGCCAAGGACCAGCCTC  200

seq1  TGCTTAGTTGGGGGTCCTGAGGAAGGGGTATTGCAAGTAGTGAAAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGTTGGGGGTCCTGAGGAAGGGGTATTGCAAGTAGTGAAAGAAAT  250

seq1  GACTCAAAGTCAAATGATTGGGTGCAAGCTGACAGCCGTGTAGTCTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAAGTCAAATGATTGGGTGCAAGCTGACAGCCGTGTAGTCTGCTT  300

seq1  GAAATGACTCCCTAAACAGCTCTCTGTAGATAGCTCTTGGCTCTGCAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGACTCCCTAAACAGCTCTCTGTAGATAGCTCTTGGCTCTGCAGTC  350

seq1  TATTTGAGATAACTTTCTGCTGTTTCATGCTAGAAAAATTTCTAAAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAGATAACTTTCTGCTGTTTCATGCTAGAAAAATTTCTAAAAACT  400

seq1  CTCCGGATAGCTCATGGGTTTTCTGACCAAAGTCAGAAAAGCTGCTATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGATAGCTCATGGGTTTTCTGACCAAAGTCAGAAAAGCTGCTATAA  450

seq1  AATATTCTTAGATTTTCTAGAAAAATTCTATTAAAGCTATGCTCATTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTTAGATTTTCTAGAAAAATTCTATTAAAGCTATGCTCATTTTC  500

seq1  CAAGAAGTTCCCTCTAGGTAGCTGCTAGAAAATATTCTAAAAGAGCTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGTTCCCTCTAGGTAGCTGCTAGAAAATATTCTAAAAGAGCTATG  550

seq1  TTAGCTCTCTAAGTAATTTTTAGTATTTCTGACCAAGGTCAGAAATCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTCTAAGTAATTTTTAGTATTTCTGACCAAGGTCAGAAATCCTG  600

seq1  TTAGAAAACAAATTTTTAAAAGAACAATATATTCATTCTCCAGAGATCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAACAAATTTTTAAAAGAACAATATATTCATTCTCCAGAGATCTC  650

seq1  TAGACAGCTCAGCATTTACTAGAAAAAAATTCTAAAAAATAATTTCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGCTCAGCATTTACTAGAAAAAAATTCTAAAAAATAATTTCTGTC  700

seq1  ACTCTCTACTATCTCATCTCATGCAGACCAAAAGCCCAGTCTTTTATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTACTATCTCATCTCATGCAGACCAAAAGCCCAGTCTTTTATTTG  750

seq1  TATATCAATTCAGTCATGTACCCCAAGTTCTGTTTTGATTATCCCATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAATTCAGTCATGTACCCCAAGTTCTGTTTTGATTATCCCATGAT  800

seq1  TGCCATTTCATGACCTCAGCCCGGTGATTCTTAGAAAAAGACAGCAAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTTCATGACCTCAGCCCGGTGATTCTTAGAAAAAGACAGCAAGTA  850

seq1  CATTTTGTTTTTAACATGGCAAATGAATTC  880
      ||||||||||||||||||||||||||||||
seq2  CATTTTGTTTTTAACATGGCAAATGAATTC  880

seq1: chr10_89738414_89739474
seq2: B6Ng01-099G22.g_69_1131

seq1  GAATTCCAGACAACCCAGAAGTCAAAATGAATGACGGTAAAGTAATAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACAACCCAGAAGTCAAAATGAATGACGGTAAAGTAATAATG  50

seq1  ATTCATCTGAAGGGAAGGGTCACTGAAGACGTGAAAACATGCTTGTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTGAAGGGAAGGGTCACTGAAGACGTGAAAACATGCTTGTTGTG  100

seq1  GGTTTTGTTTTGTCTTGAGACTGGGTACCGTGTATCCCAGTGTATTAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTTTTGTCTTGAGACTGGGTACCGTGTATCCCAGTGTATTAGTC  150

seq1  AAGGTTCTCTAGAGTCACAGAACTTATGGACAGTCTCTAGATAATAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCTCTAGAGTCACAGAACTTATGGACAGTCTCTAGATAATAAAGG  200

seq1  AATTTATTGATGACTTACAGTCGGCAGCCCAATTCCCAACAATGATTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTGATGACTTACAGTCGGCAGCCCAATTCCCAACAATGATTCAG  250

seq1  TCGCAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTACTCAGCCTCACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGCTGTGAATGGAAGTCCAAGGATCTAGCAGTTACTCAGCCTCACG  300

seq1  CAGCAAGCAGGCGAAGGAGCAAGAGCAAGAGCTAGACTCCCTTCTTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGCAGGCGAAGGAGCAAGAGCAAGAGCTAGACTCCCTTCTTCCAA  350

seq1  TGTCCTTATATTGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTATATTGTCTCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTGT  400

seq1  TCCACCACACCCTTAATCCCAGATGAAAGGCGTAGCCCAGATTAAAGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCACACCCTTAATCCCAGATGAAAGGCGTAGCCCAGATTAAAGGTG  450

seq1  TGTTCCTTAAACTCGGAGATTCAATCTTCTGGAATCCATAGCCACTATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTAAACTCGGAGATTCAATCTTCTGGAATCCATAGCCACTATGG  500

seq1  CTCAAGATCTTCAAACCAAGATCCAGATAAGGATCTCCAAGCCTCCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGATCTTCAAACCAAGATCCAGATAAGGATCTCCAAGCCTCCAGAT  550

seq1  AAGGGTCACTGGTGAGCCTTCCAATTCCGGATTGTAGTTCATTCCAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCACTGGTGAGCCTTCCAATTCCGGATTGTAGTTCATTCCAAATA  600

seq1  TTGTCAAGTTGACAACCAGGAATAACCACTACACCCAGATTTGCCTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAGTTGACAACCAGGAATAACCACTACACCCAGATTTGCCTGAAA  650

seq1  CTTCCTGTGGCTGAGGATGCTCTTGAACTTCCAATCCTTCTGTCTGTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGTGGCTGAGGATGCTCTTGAACTTCCAATCCTTCTGTCTGTCCC  700

seq1  TCCTGAGTGAGGCTTGCAGAAGTACATGTGATTTGTGTGGAGCT-GGGGA  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCTGAGTGAGGCTTGCAGAAGTACATGTGATTTGTGTGGAGCTGGGGGA  750

seq1  ATGGAACCCAGAGCTTCATGCATGCTAGACAACGCTGCCCACTGAGCGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACCCAGAGCTTCATGCATGCTAGACAACGCTGCCCACTGAGCGAC  800

seq1  TCTCCATTCCCAAAGACAATGCTTTTGAGTGAGGATTATACAGA-TTCTT  848
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTCCATTCCCAAAGACAATGCTTTTGAGTGAGGATTATACAGATTTCTT  850

seq1  GCTATGGCACATGTTACCTTTCAATAGATACCTGTTGAGTGAATCAGTGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGCACATGTTACCTTTCAATAGATACCTGTTGAGTGAATCAGTGT  900

seq1  ATACTTCCCTTGAATGCCATTCAGTGATATTATTATGCACATGTCCAAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCCCTTGAATGCCATTCAGTGATATTATTATGCACATGTCCAAAT  950

seq1  GGGGAAACCAGAAAGATGTTACATTGCAACACTGTCTTTCATGGTAAGAT  998
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGGGAAACCAGAAAGATG-TACATTGCAACACTGTCTTTCATGGTAAGAT  999

seq1  TACATGTGATGTTATTTAG--TTTGCATATTTTGTAT-TCTCCAAAAATT  1045
      ||||||||||| || ||||  ||||||||||||  || ||||| ||||||
seq2  TACATGTGATG-TAATTAGTTTTTGCATATTTTTGATATCTCC-AAAATT  1047

seq1  AATGGAAATTAATTTT  1061
      |||| || | ||||||
seq2  AATGAAATTAAATTTT  1063