BAC Information

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BAC

Clone NameB6Ng01-100C02
Chromosome10 (Build37)
Map Location 14,545,379 - 14,546,531
singlet/doubletsinglet
Overlap genenone
Upstream geneAig1, EG666859, Hivep2, Gpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr
Downstream geneLOC666917, LOC637043, LOC100039492, LOC671439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100C02.bB6Ng01-100C02.g
ACCDH909720DH909721
length1,1511,222
definitionDH909720|Mus musculus domesticus DNA, BAC clone: B6Ng01-100C02, 5' end.DH909721|Mus musculus domesticus DNA, BAC clone: B6Ng01-100C02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctcccagagaaattacttcccttttaaaatattctttcttg
gcttaaaaacacataaatctgaatataagagccaagaataaatattcctg
tgtttaataataaggcacaaaacttaaaaaattaacgtcaatctataaat
gttagaatataaatggaaataaacagctatcttaccacaacagcaggtga
tttacataatcagagttaaatatctgggatgatgtccatcctaccaatat
attttataatatgctgttgatattttaattgaagcacctgctcataagtt
tggaaaaggaaagctttgtttatttatggtttcattagtttgagtaaata
aatatttccacattgctactcaacatatattaacagttttgtgatgttcc
tagaatatttttctcattttaagtccaaaaccaaaaaaacccaaaaaaac
aaacaacaacaacaacaaaaaactaactgaaaacttcaatcaagcaccct
actagcatggttagtatatgtgaaatattgaaatgaaaagtaactgtgca
acatgaagttcagaatagtgatggaaagagagaataattataaagtcatc
ataataattactagaagaatgattactaaagaggagaactaagaaagctt
gaatgaaaaggaaagaaaaccctgatggatacttctcatcagacaaatca
agacccttgactactaaccagagacggagagtgaggaagaataggaacta
aaacacctcccttctatctcttacttcataatcaatgagttaggaaatcc
agtcctctagcttcacaatttttgaaatcagatgtgaaataaaagtagca
taaatctttgcaattagacaactttgaatttgtttctccattctgtgatg
tgtgagcacaaggagcaccatttttcttgtggatggcagagtgatgggtt
ttttgttttatgaggactgtttactcatttgaagctgaggtagaatggtt
gtaagttcccctttgccatttttaaggacaaaaaaaaaaaggaaagcaga
actccaccagttctcataaagtaaggtagttcagggacaacacagtggac
accatgtggtaacttaaaataacctattagaaatgagttcaagtttacaa
t
gaattcacacttaataattttcataattgtttcaaatatgtatcgtttgt
tactgtaagacaaagaggtttttaattggataaaaggtgggaaaggtagt
gggttgacataatgcagcttatattctaatgctaatactggattccaaag
acctgtttgttccagagacagagaatctgcatgtagacttttccccaagt
tatttctaattagtaaataaacatgttaatagccaatagctgggcagaag
agacataggtggagtttaggtttcctgagcttagggtcagaggagaacca
tgaagggagaagaaggtggaagaggatggcgaagccaccattggttagat
gagtcatggaaatgtggcccttagagatagccaattggagaaaagaacag
cccagatgaaacatagtaaacagtaagtatgagttatttatagaaaagta
gattctaatagcatagaggatagaaatctgcctagcacttgtgttgatta
aggcttattgtaaatataaaggacgtgtatgtcttttatccaggaactaa
atggtcaaaggcagggtaaaaatctagggtcaggattaagtaatttctac
aatactttttggaggtgtccaggagtctttgagctctagggtcatctcag
gtattgtctcaggagttgttgggagctattaagacaacactattgtcctg
atctctgaattgggcctctcccctggagaagaaaagggagtcaaaagcgg
gccactgacgcaaggagaacaaccagattgttccagccctaagtcagcac
tggatgtcctgacctcaagatgtaccctgataccgccaagttcctgcttc
ctcgtgtagtcgccaaagaaaaatttctgctgccccattcctcctgctga
gaagtacttccccttttgcttgtgcatttaaaccttggggcctggctaat
actttggggttttgatgcaattcagacattcctgtgtcgttattcgcaca
agacccttgtctctctttttccccatttggttcttaggagaaggtccttt
gagacctcgaatactggacctgctggacgggaaaagaagtactgggctct
gcttatcattatggtattcaagccaggatcattctcaagcaaagtgaagg
cttccgactgattgaccagaccgtttagctgtagccttcatgtctgatcc
tcatagtcgcacctagtgatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14545379_14546531
seq2: B6Ng01-100C02.b_45_1195

seq1  GAATTCATTCTCCCAGAGAAATTACTTCCCTTTTAAAATATTCTTTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTCCCAGAGAAATTACTTCCCTTTTAAAATATTCTTTCTTG  50

seq1  GCTTAAAAACACATAAATCTGAATATAAGAGCCAAGAATAAATATTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAAACACATAAATCTGAATATAAGAGCCAAGAATAAATATTCCTG  100

seq1  TGTTTAATAATAAGGCACAAAACTTAAAAAATTAACGTCAATCTATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATAATAAGGCACAAAACTTAAAAAATTAACGTCAATCTATAAAT  150

seq1  GTTAGAATATAAATGGAAATAAACAGCTATCTTACCACAACAGCAGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAATATAAATGGAAATAAACAGCTATCTTACCACAACAGCAGGTGA  200

seq1  TTTACATAATCAGAGTTAAATATCTGGGATGATGTCCATCCTACCAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATAATCAGAGTTAAATATCTGGGATGATGTCCATCCTACCAATAT  250

seq1  ATTTTATAATATGCTGTTGATATTTTAATTGAAGCACCTGCTCATAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATAATATGCTGTTGATATTTTAATTGAAGCACCTGCTCATAAGTT  300

seq1  TGGAAAAGGAAAGCTTTGTTTATTTATGGTTTCATTAGTTTGAGTAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGGAAAGCTTTGTTTATTTATGGTTTCATTAGTTTGAGTAAATA  350

seq1  AATATTTCCACATTGCTACTCAACATATATTAACAGTTTTGTGATGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTCCACATTGCTACTCAACATATATTAACAGTTTTGTGATGTTCC  400

seq1  TAGAATATTTTTCTCATTTTAAGTCCAAAACCAAAAAAACCCAAAAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATTTTTCTCATTTTAAGTCCAAAACCAAAAAAACCCAAAAAAAC  450

seq1  AAACAACAACAACAACAAAAAACTAACTGAAAACTTCAATCAAGCACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACAACAACAACAAAAAACTAACTGAAAACTTCAATCAAGCACCCT  500

seq1  ACTAGCATGGTTAGTATATGTGAAATATTGAAATGAAAAGTAACTGTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCATGGTTAGTATATGTGAAATATTGAAATGAAAAGTAACTGTGCA  550

seq1  ACATGAAGTTCAGAATAGTGATGGAAAGAGAGAATAATTATAAAGTCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAGTTCAGAATAGTGATGGAAAGAGAGAATAATTATAAAGTCATC  600

seq1  ATAATAATTACTAGAAGAATGATTACTAAAGAGGAGAACTAAGAAAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATTACTAGAAGAATGATTACTAAAGAGGAGAACTAAGAAAGCTT  650

seq1  GAATGAAAAGGAAAGAAAACCCTGATGGATACTTCTCATCAGACAAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAAGGAAAGAAAACCCTGATGGATACTTCTCATCAGACAAATCA  700

seq1  AGACCCTTGACTACTAACCAGAGACGGAGAGTGAGGAAGAATAGGAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTTGACTACTAACCAGAGACGGAGAGTGAGGAAGAATAGGAACTA  750

seq1  AAACACCTCCCTTCTATCTCTTACTTCATAATCAATGAGTTAGGAAATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTCCCTTCTATCTCTTACTTCATAATCAATGAGTTAGGAAATCC  800

seq1  AGTCCTCTAGCTTCACAA-TTTTGAAATCAGATGTGAAATAAAAGTAGCA  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGTCCTCTAGCTTCACAATTTTTGAAATCAGATGTGAAATAAAAGTAGCA  850

seq1  TAAATCTTTGCAATTAGACAACTTTGAATTTGTTTCTCCATTCTGTGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTTGCAATTAGACAACTTTGAATTTGTTTCTCCATTCTGTGATG  900

seq1  TGTGAGCACAAGGAAGCACCA-TTTTCTTGTGGATGGCAGAGTGAT-GGT  947
      ||||||||||||| ||||||| |||||||||||||||||||||||| |||
seq2  TGTGAGCACAAGG-AGCACCATTTTTCTTGTGGATGGCAGAGTGATGGGT  949

seq1  TGTTTG-TTTATGAGGACTGTTTACTCATTTGAAGCTGAGGTAGAATGGT  996
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTATGAGGACTGTTTACTCATTTGAAGCTGAGGTAGAATGGT  999

seq1  GTAAAGTTCCCCTTTGCCATTTTTAAAGACAAAAAAAAAAAAGAAAGCAG  1046
         ||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  TGTAAGTTCCCCTTTGCCATTTTTAAGGACAAAAAAAAAAAGGAAAGCAG  1049

seq1  AACCCCACCAGTTCTCATAAAAGTAAGGTAGTTCAGGTGACAACACAGGT  1096
      ||| |||||||||||||| |||||||||||||||||| ||||||||| ||
seq2  AACTCCACCAGTTCTCAT-AAAGTAAGGTAGTTCAGG-GACAACACA-GT  1096

seq1  GGACACACAGGTGGAAACTTAAAAAAAAACTATTTAGAAATGAG-TCAAG  1145
      |||||| || |||| ||||| |||| || ||| ||||||||||| |||||
seq2  GGACAC-CATGTGGTAACTT-AAAATAACCTA-TTAGAAATGAGTTCAAG  1143

seq1  GTTACAAT  1153
       |||||||
seq2  TTTACAAT  1151