BAC Information

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BAC

Clone NameB6Ng01-100F06
Chromosome10 (Build37)
Map Location 107,151,447 - 107,316,725
singlet/doubletdoublet
Overlap genePtprq, EG628870
Upstream genePpfia2, 8430416H19Rik, Lin7a, Myf5, Myf6
Downstream genePpp1r12a, Pawr, EG667814, Syt1, EG368203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100F06.bB6Ng01-100F06.g
ACCDH909858DH909859
length1541,075
definitionDH909858|Mus musculus domesticus DNA, BAC clone: B6Ng01-100F06, 5' end.DH909859|Mus musculus domesticus DNA, BAC clone: B6Ng01-100F06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,151,447 - 107,151,600)(107,315,647 - 107,316,725)
sequence
gaattcatacactttgatccaactatacggttactataaagtaccaaaag
tcttacatatcaagatttgtttcacccatatacacacagtttttgttttt
gtttttgtttttagtggttggctccttggttggtttgggtggtggtagtg
tttt
gaattcattctaagaaaattctcaacaacatttgattgagttgttagcta
ttcaaagagcataacccttattatttcttttgagatacatgtgacataca
tgtttcttaaacaggcctcataatggacaatggaacttgcatctctttgg
agagctgcccttgtagttttcacggattagcttattcagttggttcaaaa
atcgaacaagagtgcactgaatggtaagtggtccatggggagagagtaat
ttctgagtctttttctatttaataacttggtcatgacaggcatcttgcag
agtctacccgttgctaatttttatctgcaaattctgagatgcagtctgta
ttttacttgaactacacaaattggttctctttatgtgtttgtgttcttat
tacttcttttggtaattttataaaatccagggcctatatacggcccatcc
aatttttgctgttcataataactaattaacacatagttctattcttagag
ctagatgactttcctgggtttatgtactgaatattttataaagtgactgt
ctattggcggttttgggacatgatcaggaagatttgtaatccttattaaa
cttgctcagatgctgggcaagcgagaaattcctccaggacagtccattgt
aaaaatagaagcctgtatgaccacaactccgttctctttgctctcagcat
actcaaaagacatgcaggtttataactaaccatataacatctcagtagct
gatgtcatcagactcttgctttcctcagaaactcctctatttgtgaggaa
gggaaggggcctttgccttccactagaagagagctgtttcttcttgttag
tgtcttatgctagcaaatagatacatatggatactttatttccaatcaag
cagtttgtacctcttagtgcacttttttagagaggtttttctactcagat
aatagaagatctattagcttatatatcttgtttattagaaatatattgag
gaaatgtaagcatactttctgtggtcagctaaagtttctaattttgttta
gtgtatgtgttgggggaggttggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_107151447_107151600
seq2: B6Ng01-100F06.b_45_198

seq1  GAATTCATACACTTTGATCCAACTATACGGTTACTATAAAGTACCAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACACTTTGATCCAACTATACGGTTACTATAAAGTACCAAAAG  50

seq1  TCTTACATATCAAGATTTGTTTCACCCATATACACACAGTTTTTGTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACATATCAAGATTTGTTTCACCCATATACACACAGTTTTTGTTTTT  100

seq1  GTTTTTGTTTTTAGTGGTTGGCTCCTTGGTTGGTTTGGGTGGTGGTAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTTTTAGTGGTTGGCTCCTTGGTTGGTTTGGGTGGTGGTAGTG  150

seq1  TTTT  154
      ||||
seq2  TTTT  154

seq1: chr10_107315647_107316725
seq2: B6Ng01-100F06.g_68_1141 (reverse)

seq1  TCCAAACTCCACCAACACATACACTAAACAAAATTAGAAAACTATTAGCC  50
      ||||| |||| |||||||||||||||||||||||||| ||||| |||| |
seq2  TCCAACCTCCCCCAACACATACACTAAACAAAATTAG-AAACT-TTAG-C  47

seq1  TGA-CACAGAAAGTATGCTTACATTTCCTCAATATATTTCTTAATATACA  99
      ||| |||||||||||||||||||||||||||||||||||| ||||| |||
seq2  TGACCACAGAAAGTATGCTTACATTTCCTCAATATATTTC-TAATAAACA  96

seq1  AGATATATTAAGCTAATAGGTTCTCTATTATCTGAGTAGAAAAACCTCTC  149
      ||||||| ||||||||||| |  |||||||||||||||||||||||||||
seq2  AGATATA-TAAGCTAATAGATCTTCTATTATCTGAGTAGAAAAACCTCTC  145

seq1  TAAAAAGTTGCACTAAGAGTTACAAACTGCTTGATTGGAAAATAAGTATC  199
      ||||||  ||||||||||| |||||||||||||||||||||  |||||||
seq2  TAAAAAAGTGCACTAAGAGGTACAAACTGCTTGATTGGAAATAAAGTATC  195

seq1  CATTATGTATCTATTTGCTAGCATAAGACACTAACAAGAAGAAACAGCTC  249
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-TATGTATCTATTTGCTAGCATAAGACACTAACAAGAAGAAACAGCTC  244

seq1  TCTTCTAGTGGAAGGCAAAGGCCCCTTCCCTTCCTCACAAATAGAGGAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAGTGGAAGGCAAAGGCCCCTTCCCTTCCTCACAAATAGAGGAGT  294

seq1  TTCTGAGGAAAGCAAGAGTCTGATGACATCAGCTACTGAGATGTTATATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGAAAGCAAGAGTCTGATGACATCAGCTACTGAGATGTTATATG  344

seq1  GTTAGTTATAAACCTGCATGTCTTTTGAGTATGCTGAGAGCAAAGAGAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTATAAACCTGCATGTCTTTTGAGTATGCTGAGAGCAAAGAGAAC  394

seq1  GGAGTTGTGGTCATACAGGCTTCTATTTTTACAATGGACTGTCCTGGAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGTGGTCATACAGGCTTCTATTTTTACAATGGACTGTCCTGGAGG  444

seq1  AATTTCTCGCTTGCCCAGCATCTGAGCAAGTTTAATAAGGATTACAAATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCGCTTGCCCAGCATCTGAGCAAGTTTAATAAGGATTACAAATC  494

seq1  TTCCTGATCATGTCCCAAAACCGCCAATAGACAGTCACTTTATAAAATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGATCATGTCCCAAAACCGCCAATAGACAGTCACTTTATAAAATAT  544

seq1  TCAGTACATAAACCCAGGAAAGTCATCTAGCTCTAAGAATAGAACTATGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACATAAACCCAGGAAAGTCATCTAGCTCTAAGAATAGAACTATGT  594

seq1  GTTAATTAGTTATTATGAACAGCAAAAATTGGATGGGCCGTATATAGGCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTAGTTATTATGAACAGCAAAAATTGGATGGGCCGTATATAGGCC  644

seq1  CTGGATTTTATAAAATTACCAAAAGAAGTAATAAGAACACAAACACATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTTTATAAAATTACCAAAAGAAGTAATAAGAACACAAACACATAA  694

seq1  AGAGAACCAATTTGTGTAGTTCAAGTAAAATACAGACTGCATCTCAGAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCAATTTGTGTAGTTCAAGTAAAATACAGACTGCATCTCAGAAT  744

seq1  TTGCAGATAAAAATTAGCAACGGGTAGACTCTGCAAGATGCCTGTCATGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATAAAAATTAGCAACGGGTAGACTCTGCAAGATGCCTGTCATGA  794

seq1  CCAAGTTATTAAATAGAAAAAGACTCAGAAATTACTCTCTCCCCATGGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTATTAAATAGAAAAAGACTCAGAAATTACTCTCTCCCCATGGAC  844

seq1  CACTTACCATTCAGTGCACTCTTGTTCGATTTTTGAACCAACTGAATAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACCATTCAGTGCACTCTTGTTCGATTTTTGAACCAACTGAATAAG  894

seq1  CTAATCCGTGAAAACTACAAGGGCAGCTCTCCAAAGAGATGCAAGTTCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCCGTGAAAACTACAAGGGCAGCTCTCCAAAGAGATGCAAGTTCCA  944

seq1  TTGTCCATTATGAGGCCTGTTTAAGAAACATGTATGTCACATGTATCTCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCATTATGAGGCCTGTTTAAGAAACATGTATGTCACATGTATCTCA  994

seq1  AAAGAAATAATAAGGGTTATGCTCTTTGAATAGCTAACAACTCAATCAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATAATAAGGGTTATGCTCTTTGAATAGCTAACAACTCAATCAAA  1044

seq1  TGTTGTTGAGAATTTTCTTAGAATGAATTC  1079
      ||||||||||||||||||||||||||||||
seq2  TGTTGTTGAGAATTTTCTTAGAATGAATTC  1074