BAC Information

Click to search

BAC

Clone NameB6Ng01-101B11
Chromosome10 (Build37)
Map Location 106,644,870 - 106,645,411
singlet/doubletsinglet
Overlap genenone
Upstream geneEG639162, Ppfia2, Olfr1556-ps1, 8430416H19Rik
Downstream geneLin7a, Myf5, Myf6, Ptprq, EG628870, Ppp1r12a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101B11.bB6Ng01-101B11.g
ACCDH910390DH910391
length8381,173
definitionDH910390|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B11, 5' end.DH910391|Mus musculus domesticus DNA, BAC clone: B6Ng01-101B11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttctgaaaatattttcacttttcagtacacagttattttttt
aaagacagtcttcactgaaatattgtttatgtagcttaaaattcaatcaa
ttaaagggtgtaatccatgggtttcagtatattcactatggtgtaatttt
agcaaaaaaaaattctccctatcttagttacgtttttattgctatgaaga
gacaccatggcaagttttataaatgaaaatatttaattggtaaacggttt
cagagatttagtctattatcatcatgaatggaaatatagacttgtgcagg
cagacgtggacctgaagaaagagctgagagttctctgtcttgctctgcaa
gcagcagaagaaacctgtatatcacaatggcatagtttgaacatatatga
cctcaaattccaccctcaccgtgacacacttcctcaaacaaggccacatc
tactcccaaacagccatacctcctaacagtgccattccctatgttcaaac
actcaagcatgtgagtccccgggccattcctatcaatccactctactccc
caaagaaatccctcatcacttgtccttccatctccctttatgagacacca
ctatgaaatttccctctgtgcgattttacctactcataaaaatggactca
cataccattcagacttgcatatgatttcactcaaacaggataatgttcaa
ggtttgtttatgccaaagcatgttttaaacttgaattccttttaatgaac
aaataatgcagtatagataaaccttgatttttgttttttttttttttttt
tttttttttggcagtcatcatttggttgatattggggt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctatggatggatcatagggctcccaa
tggaggagctagagaaagtagccaggagctaaggatctgctaccctatag
gtggaacaacattatgagctaaccagtacccggagcctcttgactctagc
tgcatatatatcaaaagaatggctagtcggccatcactggaaaggagccc
aatgggactgcactttaatgccagtacaggaatcaggcaaaaaggggatg
ggtgtgccggggaaatggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106644870_106645411
seq2: B6Ng01-101B11.b_49_590

seq1  GAATTCTCTTCTGAAAATATTTTCACTTTTCAGTACACAGTTATTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTGAAAATATTTTCACTTTTCAGTACACAGTTATTTTTTT  50

seq1  AAAGACAGTCTTCACTGAAATATTGTTTATGTAGCTTAAAATTCAATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGTCTTCACTGAAATATTGTTTATGTAGCTTAAAATTCAATCAA  100

seq1  TTAAAGGGTGTAATCCATGGGTTTCAGTATATTCACTATGGTGTAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGGTGTAATCCATGGGTTTCAGTATATTCACTATGGTGTAATTTT  150

seq1  AGCAAAAAAAAATTCTCCCTATCTTAGTTACGTTTTTATTGCTATGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAAAAAATTCTCCCTATCTTAGTTACGTTTTTATTGCTATGAAGA  200

seq1  GACACCATGGCAAGTTTTATAAATGAAAATATTTAATTGGTAAACGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCATGGCAAGTTTTATAAATGAAAATATTTAATTGGTAAACGGTTT  250

seq1  CAGAGATTTAGTCTATTATCATCATGAATGGAAATATAGACTTGTGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATTTAGTCTATTATCATCATGAATGGAAATATAGACTTGTGCAGG  300

seq1  CAGACGTGGACCTGAAGAAAGAGCTGAGAGTTCTCTGTCTTGCTCTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACGTGGACCTGAAGAAAGAGCTGAGAGTTCTCTGTCTTGCTCTGCAA  350

seq1  GCAGCAGAAGAAACCTGTATATCACAATGGCATAGTTTGAACATATATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGAAGAAACCTGTATATCACAATGGCATAGTTTGAACATATATGA  400

seq1  CCTCAAATTCCACCCTCACCGTGACACACTTCCTCAAACAAGGCCACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAATTCCACCCTCACCGTGACACACTTCCTCAAACAAGGCCACATC  450

seq1  TACTCCCAAACAGCCATACCTCCTAACAGTGCCATTCCCTATGTTCAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCAAACAGCCATACCTCCTAACAGTGCCATTCCCTATGTTCAAAC  500

seq1  ACTCAAGCATGTGAGTCCCCGGGCCATTCCTATCAATCCACT  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGCATGTGAGTCCCCGGGCCATTCCTATCAATCCACT  542