BAC Information

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BAC

Clone NameB6Ng01-101J16
Chromosome10 (Build37)8 (Build37)
Map Location 104,054,179 - 104,054,36370,228,691 - 70,229,206
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101J16.bB6Ng01-101J16.g
ACCDH910736DH910737
length934710
definitionDH910736|Mus musculus domesticus DNA, BAC clone: B6Ng01-101J16, 5' end.DH910737|Mus musculus domesticus DNA, BAC clone: B6Ng01-101J16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,179 - 104,054,363)(70,228,691 - 70,229,206)
sequence
gaattctcaactgaggaataccaatggctgagaagcacctaaagaaatgt
tcaacatccttagtcaacagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaccttgggtgactgca
gatgctggcaaggatgtggagaaagaggaacacttctctgttagaccatg
aaaggcagtctgtgttctggttgagtgaggcttactgcagtgactcagta
gaaaatcctacaagggacagaaccgtgagctactctcccagacattaggc
tcctaacaccatgagcccttaacaccataatcctgcggctatctgtcaca
gaggcaatgccctaagttcctggtattctaactgtgttccacccccatag
ttacctggctacagcaagatagcccagcccactataaaagggactgcttg
tcccctcctctctctcttgttctcttgcttcttactctcacctcttgttc
tgctctctcctcctcccttaccccctctctccaagttgccatggctgccc
tttccttctttactcttctctctctctctctctctatgcttttctacaat
aaagctctataaccatggtccatctctgctcaccaggacctgctctgctg
gagcaatggagcaggtttccctctaatgagccgagtgtctaacctcctgc
caggagtcctccctgtgcttcagccatggccaccagtgaaaccaagcagc
ctgctgagccagtcacctgagctagctagactctctcgtccccgaagtaa
cctgccagagctacccttatcccttagacccctgggccagagtccacctg
agggtctgtatcagatcttccgggatgtccgagagtgagaacctggtcat
ccctggcctttgtgtggtccaggaactataaaac
gaattcctgaatataagtgtgatggctattcttggttgtcaacttaacta
catctgcagtgaactaaatctcaagcagctgggtacccatgtgaaggatt
tttttttcccttaattaaatcatttgaagtgggaagatatatctttaatc
cagatctttggaggggggacgatctaccttgaatctgggccacaccttct
gctggcagcctacataaagaacatggaaaggatgctttagctcctttcct
gcttgttaacactttccctagcgagtccattccttcactggtaccggagc
ctacttcttagggttctggcataaactgaagacaagctgagacatacagc
ctcatggaccgaacaactactggattcttggatcacccattggtagagag
ccattgttggacacgtgggacaacagcctgcaagctagaatgactgagaa
tctagttgcttctcggcccacaagactggatgcctcagaagtcccctgtg
ctgcagacctgaagggcttcttaaaaactatgactattgtctatacttga
aggctgaagaactgagttttgatggaagcagcagtgatagacagcagcta
tagaatagataggttcaccagcaagaggccaaggcaagcagtcaaagaag
aacagtgtttccctctaacctccttatatcagggacaccttccctgttcc
tgtcaatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054179_104054363
seq2: B6Ng01-101J16.b_42_225 (reverse)

seq1  AGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATT  50
      |||||||||||||||||||||||| |||||||||||| ||||||  |  |
seq2  AGTGTTCCTCTTTCTCCACATCCTTGCCAGCATCTGCAGTCACCCAAGGT  50

seq1  TTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTT  100

seq1  TGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGC  150
      ||||||||||||||||| ||| |||||||||||||||||| || ||||||
seq2  TGATTTGCATTTCCCTGTTGACTAAGGATGTTGAACATTTCTTTAGGTGC  150

seq1  TTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  185
      ||||| |||||| |||||||||||| |||||||||
seq2  TTCTCAGCCATT-GGTATTCCTCAGTTGAGAATTC  184

seq1: chr8_70228691_70229206
seq2: B6Ng01-101J16.g_69_584 (reverse)

seq1  CCCTTCAGGTCTGCAGCACAGGGGACTTCTGAGGCATCCAGTCTTGTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAGGTCTGCAGCACAGGGGACTTCTGAGGCATCCAGTCTTGTGGG  50

seq1  CCGAGAAGCAACTAGATTCTCAGTCATTCTAGCTTGCAGGCTGTTGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGAAGCAACTAGATTCTCAGTCATTCTAGCTTGCAGGCTGTTGTCCC  100

seq1  ACGTGTCCAACAATGGCTCTCTACCAATGGGTGATCCAAGAATCCAGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTCCAACAATGGCTCTCTACCAATGGGTGATCCAAGAATCCAGTAG  150

seq1  TTGTTCGGTCCATGAGGCTGTATGTCTCAGCTTGTCTTCAGTTTATGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCGGTCCATGAGGCTGTATGTCTCAGCTTGTCTTCAGTTTATGCCA  200

seq1  GAACCCTAAGAAGTAGGCTCCGGTACCAGTGAAGGAATGGACTCGCTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTAAGAAGTAGGCTCCGGTACCAGTGAAGGAATGGACTCGCTAGG  250

seq1  GAAAGTGTTAACAAGCAGGAAAGGAGCTAAAGCATCCTTTCCATGTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTTAACAAGCAGGAAAGGAGCTAAAGCATCCTTTCCATGTTCTT  300

seq1  TATGTAGGCTGCCAGCAGAAGGTGTGGCCCAGATTCAAGGTAGATCGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGGCTGCCAGCAGAAGGTGTGGCCCAGATTCAAGGTAGATCGTCC  350

seq1  CCCCTCCAAAGATCTGGATTAAAGATATATCTTCCCACTTCAAATGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCAAAGATCTGGATTAAAGATATATCTTCCCACTTCAAATGATTT  400

seq1  AATTAAGGGAAAAAAAAATCCTTCACATGGGTACCCAGCTGCTTGAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGGAAAAAAAAATCCTTCACATGGGTACCCAGCTGCTTGAGATT  450

seq1  TAGTTCACTGCAGATGTAGTTAAGTTGACAACCAAGAATAGCCATCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCACTGCAGATGTAGTTAAGTTGACAACCAAGAATAGCCATCACAC  500

seq1  TTATATTCAGGAATTC  516
      ||||||||||||||||
seq2  TTATATTCAGGAATTC  516