BAC Information

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BAC

Clone NameB6Ng01-101P14
Chromosome10 (Build37)
Map Location 85,354,437 - 85,469,900
singlet/doubletdoublet
Overlap genePrdm4, Ascl4, D10Wsu52e, Bpil2
Upstream geneRfx4, Ric8b, Fhl4, AI597468, Mterfd3, Cry1, EG666974, Btbd11, EG626858, LOC626878, LOC669723, LOC626940, Pwp1
Downstream geneFbxo7, Syn3, Timp3, EG627035, LOC672902, LOC100041419, EG382395, Hsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101P14.bB6Ng01-101P14.g
ACCDH910999DH911000
length1,0271,106
definitionDH910999|Mus musculus domesticus DNA, BAC clone: B6Ng01-101P14, 5' end.DH911000|Mus musculus domesticus DNA, BAC clone: B6Ng01-101P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,468,877 - 85,469,900)(85,354,437 - 85,355,538)
sequence
gaattcagcaatgacagctcatccaaactgttaacatcccaaacaagaag
taaggcttgtgccagtattaaccacttggatgccattgaaataagtctac
accactgttgctattggcatctgtcatttaaaccaacaagaaaaataggt
tggcattaatccatggcgcagtattaattgaacaagcaaacaattgctta
cttatacattccaaacatgggtgacataacactgaatacaatgtgtttct
tttccttggagagtatgtttgtctcatcaagatacttctgcatgactact
ctgagccaggcattgtactaggctctggagctacagaaacaaaacgttcc
cttagtgaagtaaggacagagaaataaagatgcgatcacaattcagagcc
ttgagcacctcatactaactctcagaacaaaggcatatatgattcaattc
atagcctcgaggagacaatgactcattgtccagtcaatccaccattcagt
gtttgcccattgcctaccgtgtgacagttgctgtcccaagtgctgacaca
atgaagtcattccttgcaacaccaaaaaatgtccagaaaggaggaaaccc
caataatgaatatttaaataatgattaggttataacttctttgtctaaga
atcacagctccatatgaagtctcgtaactgatggaattgaagaaaaaaat
ataacaggaaaaggtatctaaatacacaatcaccaaaaattaattcaaaa
actcataatgaacctaaagtgtttctggggatgtatgccagtggtcccct
gtgtgatgtcactgcagctattgctctgtacagatgacatgctcactgca
caggctgccacactatacagcaccaacactgggctgctgaaatacctcag
ctcacactaaagactattcttgcagtatgaacttctgttgttcttactgt
gcacacaaagtttcatcctcctcatagaaacaacatggtctatttacaga
aaacaaaacttttaattgcatttgtgt
gaattcaccccgagtaaagggagaaaccacttggaacactaatggtgcta
ccgtagtattagcagccacccccagctctggccttcaagctgctagtttc
caaggagacagtaaagccccaccttaagagggtgggggggagaggctaca
aacccaggtgcagtccgagcactgcacagaaacaatcagggtatgatctc
aaagccaaaactaagaaatgctttcttttaaccttcaagtccttcttcca
caaaagatcatgacaaattccatattttcattaaaaatgattttaattct
tcctagaggaatacaggtttgaatgaaatacattcattctataaatacat
tagcagcaaaaccttgccagcagagtcctctactcaagcctttgagcagg
aagacgtgttccatcaatcctgtcaagttcagggtgtccgcttctggaga
aaagctgggtgtgcctgctcacagggagtgactaataagccttctcatct
tccaattcctttggtatcctctacactcagctggtgaggaccttcagcaa
caaggaagacaactgggaaggcctaactgaaacccacaatgcatttggaa
ctacttgttgctttcagctagcaacattttaatggttttcataaagtaaa
cctacatttcaaaaaagaaagaaagaaaacaaaccatcattccgatcctt
cctcctgtgggcagaagaaccgatctcgtgatctcgtcaggcgagcccat
gtgcacttgctgactagagactacccagcatgtattatctcaacactgtt
aatgtttctaggtccctctctgaaagactgaaggcttttctaaagagaca
aggctagatcacaaagatgtgcatacacataaccacgtggctaacctggc
ttctatcaaaggtgggcttctggaccttttcctctatcagtcactgtcct
ctgatccacgcctggctgcttacctgccctctcacccctgctgaagactg
aggcagcaggagcaagaaggaagcaagtggtcctttttactaattacaag
gcctccttaacactttgcaacggcgttaaccttacatcaatggcttaatg
tgtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_85468877_85469900
seq2: B6Ng01-101P14.b_52_1078 (reverse)

seq1  ACACAAATGCAATTAAAAGTTTTTGTTTTCTGTAAATAGACCATTGTGTT  50
      ||||||||||||||||||| ||||||||||||||||||||||||  ||||
seq2  ACACAAATGCAATTAAAAG-TTTTGTTTTCTGTAAATAGACCATGTTGTT  49

seq1  TCTATGA-GAGGATGAAACTTTGTGTGCACAGTAAGAAC-ACAGAAGTTC  98
      ||||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTATGAGGAGGATGAAACTTTGTGTGCACAGTAAGAACAACAGAAGTTC  99

seq1  ATACTGCAAG-ATAGTCTTTAGTGTGAGCTGAGGTATTTCAGCAG-CCAG  146
      |||||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  ATACTGCAAGAATAGTCTTTAGTGTGAGCTGAGGTATTTCAGCAGCCCAG  149

seq1  TGTTGGTGCTGTATAGTGTGGCAGCCTGTGCAGTGAGCATGTCATCTGTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTGCTGTATAGTGTGGCAGCCTGTGCAGTGAGCATGTCATCTGTA  199

seq1  CAGAGCAATAGCTGCAGTGACATCACACAGGGGACCACTGGCATACATCC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAATAGCTGCAGTGACATCACACAGGGGACCACTGGCATACATCC  249

seq1  CCAGAAACACTTTAGGTTCATTATGAGTTTTTGAATTAATTTTTGGTGAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACACTTTAGGTTCATTATGAGTTTTTGAATTAATTTTTGGTGAT  299

seq1  TGTGTATTTAGATACCTTTTCCTGTTATATTTTTTTCTTCAATTCCATCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTTAGATACCTTTTCCTGTTATATTTTTTTCTTCAATTCCATCA  349

seq1  GTTACGAGACTTCATATGGAGCTGTGATTCTTAGACAAAGAAGTTATAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACGAGACTTCATATGGAGCTGTGATTCTTAGACAAAGAAGTTATAAC  399

seq1  CTAATCATTATTTAAATATTCATTATTGGGGTTTCCTCCTTTCTGGACAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCATTATTTAAATATTCATTATTGGGGTTTCCTCCTTTCTGGACAT  449

seq1  TTTTTGGTGTTGCAAGGAATGACTTCATTGTGTCAGCACTTGGGACAGCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTGTTGCAAGGAATGACTTCATTGTGTCAGCACTTGGGACAGCA  499

seq1  ACTGTCACACGGTAGGCAATGGGCAAACACTGAATGGTGGATTGACTGGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCACACGGTAGGCAATGGGCAAACACTGAATGGTGGATTGACTGGA  549

seq1  CAATGAGTCATTGTCTCCTCGAGGCTATGAATTGAATCATATATGCCTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGTCATTGTCTCCTCGAGGCTATGAATTGAATCATATATGCCTTT  599

seq1  GTTCTGAGAGTTAGTATGAGGTGCTCAAGGCTCTGAATTGTGATCGCATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGAGTTAGTATGAGGTGCTCAAGGCTCTGAATTGTGATCGCATC  649

seq1  TTTATTTCTCTGTCCTTACTTCACTAAGGGAACGTTTTGTTTCTGTAGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTCTGTCCTTACTTCACTAAGGGAACGTTTTGTTTCTGTAGCT  699

seq1  CCAGAGCCTAGTACAATGCCTGGCTCAGAGTAGTCATGCAGAAGTATCTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCCTAGTACAATGCCTGGCTCAGAGTAGTCATGCAGAAGTATCTT  749

seq1  GATGAGACAAACATACTCTCCAAGGAAAAGAAACACATTGTATTCAGTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGACAAACATACTCTCCAAGGAAAAGAAACACATTGTATTCAGTGT  799

seq1  TATGTCACCCATGTTTGGAATGTATAAGTAAGCAATTGTTTGCTTGTTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACCCATGTTTGGAATGTATAAGTAAGCAATTGTTTGCTTGTTCA  849

seq1  ATTAATACTGCGCCATGGATTAATGCCAACCTATTTTTCTTGTTGGTTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATACTGCGCCATGGATTAATGCCAACCTATTTTTCTTGTTGGTTTA  899

seq1  AATGACAGATGCCAATAGCAACAGTGGTGTAGACTTATTTCAATGGCATC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGATGCCAATAGCAACAGTGGTGTAGACTTATTTCAATGGCATC  949

seq1  CAAGTGGTTAATACTGGCACAAGCCTTACTTCTTGTTTGGGATGTTAACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGTTAATACTGGCACAAGCCTTACTTCTTGTTTGGGATGTTAACA  999

seq1  GTTTGGATGAGCTGTCATTGCTGAATTC  1024
      ||||||||||||||||||||||||||||
seq2  GTTTGGATGAGCTGTCATTGCTGAATTC  1027

seq1: chr10_85354437_85355538
seq2: B6Ng01-101P14.g_73_1178

seq1  GAATTCACCCCGAGTAAAGGGAGAAACCACTTGGAACACTAATGGTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCCGAGTAAAGGGAGAAACCACTTGGAACACTAATGGTGCTA  50

seq1  CCGTAGTATTAGCAGCCACCCCCAGCTCTGGCCTTCAAGCTGCTAGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTAGTATTAGCAGCCACCCCCAGCTCTGGCCTTCAAGCTGCTAGTTTC  100

seq1  CAAGGAGACAGTAAAGCCCCACCTTAAGAGGGTGGGGGGGAGAGGCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGACAGTAAAGCCCCACCTTAAGAGGGTGGGGGGGAGAGGCTACA  150

seq1  AACCCAGGTGCAGTCCGAGCACTGCACAGAAACAATCAGGGTATGATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGTGCAGTCCGAGCACTGCACAGAAACAATCAGGGTATGATCTC  200

seq1  AAAGCCAAAACTAAGAAATGCTTTCTTTTAACCTTCAAGTCCTTCTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAAAACTAAGAAATGCTTTCTTTTAACCTTCAAGTCCTTCTTCCA  250

seq1  CAAAAGATCATGACAAATTCCATATTTTCATTAAAAATGATTTTAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATCATGACAAATTCCATATTTTCATTAAAAATGATTTTAATTCT  300

seq1  TCCTAGAGGAATACAGGTTTGAATGAAATACATTCATTCTATAAATACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGAGGAATACAGGTTTGAATGAAATACATTCATTCTATAAATACAT  350

seq1  TAGCAGCAAAACCTTGCCAGCAGAGTCCTCTACTCAAGCCTTTGAGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCAAAACCTTGCCAGCAGAGTCCTCTACTCAAGCCTTTGAGCAGG  400

seq1  AAGACGTGTTCCATCAATCCTGTCAAGTTCAGGGTGTCCGCTTCTGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGTGTTCCATCAATCCTGTCAAGTTCAGGGTGTCCGCTTCTGGAGA  450

seq1  AAAGCTGGGTGTGCCTGCTCACAGGGAGTGACTAATAAGCCTTCTCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGGGTGTGCCTGCTCACAGGGAGTGACTAATAAGCCTTCTCATCT  500

seq1  TCCAATTCCTTTGGTATCCTCTACACTCAGCTGGTGAGGACCTTCAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTCCTTTGGTATCCTCTACACTCAGCTGGTGAGGACCTTCAGCAA  550

seq1  CAAGGAAGACAACTGGGAAGGCCTAACTGAAACCCACAATGCATTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAGACAACTGGGAAGGCCTAACTGAAACCCACAATGCATTTGGAA  600

seq1  CTACTTGTTGCTTTCAGCTAGCAACATTTTAATGGTTTTCATAAAGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGTTGCTTTCAGCTAGCAACATTTTAATGGTTTTCATAAAGTAAA  650

seq1  CCTACATTTCAAAAAAGAAAGAAAGAAAACAAACCATCATTCCGATCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATTTCAAAAAAGAAAGAAAGAAAACAAACCATCATTCCGATCCTT  700

seq1  CCTCCTGTGGGCAGAAGAACCGATCTCGTGATCTCGTCAGGCGAGCCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGTGGGCAGAAGAACCGATCTCGTGATCTCGTCAGGCGAGCCCAT  750

seq1  GTGCACTTGCTGACTAGAGACTACCCAGCATGTATTATCTCAACACTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTTGCTGACTAGAGACTACCCAGCATGTATTATCTCAACACTGTT  800

seq1  AATG-TTCTAGGT-CCTCTCTGAAAGACTGAAGGCTTTCCTAAAGAGACA  848
      |||| |||||||| |||||||||||||||||||||||| |||||||||||
seq2  AATGTTTCTAGGTCCCTCTCTGAAAGACTGAAGGCTTTTCTAAAGAGACA  850

seq1  AGGCTAGATCACAAAGATGTGCATACACATAACCACGTGGCTAACCTTGG  898
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGCTAGATCACAAAGATGTGCATACACATAACCACGTGGCTAACC-TGG  899

seq1  CTTCTATCAGAGGTGGGCTTCTGGACCTTTTCCTCTATCAGTCACTGTCC  948
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATCAAAGGTGGGCTTCTGGACCTTTTCCTCTATCAGTCACTGTCC  949

seq1  TCTGATCCACGCCT-GCTGCTTTACCTGCCCTCTCAACCCCTGCTG-AGA  996
      |||||||||||||| ||||| |||||||||||||| |||||||||| |||
seq2  TCTGATCCACGCCTGGCTGC-TTACCTGCCCTCTC-ACCCCTGCTGAAGA  997

seq1  CTGAGGCAGCAGGAGCCAGAAGGTAGGCAGGTGTTCCTTTTTAACTAATT  1046
      |||||||||||||||| |||||| | ||| ||| |||||||| |||||||
seq2  CTGAGGCAGCAGGAGCAAGAAGG-AAGCAAGTGGTCCTTTTT-ACTAATT  1045

seq1  AC-AGGCCTCC-TAACAC-TTGC-ACGGCGGTTACCTTACATCAGT-GCT  1091
      || |||||||| |||||| |||| |||||| | ||||||||||| | |||
seq2  ACAAGGCCTCCTTAACACTTTGCAACGGCGTTAACCTTACATCAATGGCT  1095

seq1  TAATGTGTGGG  1102
      |||||||||||
seq2  TAATGTGTGGG  1106