BAC Information

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BAC

Clone NameB6Ng01-102E07
Chromosome10 (Build37)
Map Location 126,171,709 - 126,172,787
singlet/doubletsinglet
Overlap genenone
Upstream geneLrig3, LOC100043547
Downstream geneLOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102E07.bB6Ng01-102E07.g
ACCDH911209DH911210
length1,0701,208
definitionDH911209|Mus musculus domesticus DNA, BAC clone: B6Ng01-102E07, 5' end.DH911210|Mus musculus domesticus DNA, BAC clone: B6Ng01-102E07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctggagccaagcacacaattcagccatctatttccttctacc
aatgaactagaccagtgcccatgcagcctagtatcctaccatgctaccct
cccccacaggagtactttaacatctgacagtttctctggaccagaaaaat
attctctcaccagtaggaaaaccgcccccacactatctgagatcagagtt
cacatcagtgcctctgtgtgagccagatttgcctgttgtacaaaagggag
gcaggtggccatagaacagagggagtctgtgaccgtcagatcagtggcag
caaggctgctagaattcccacctaagtccatcatctccagtgaataaaat
taaattaacaccttgttcttcactgggtaaaaaattagcaccatgttccc
taccttctcttcggggtatctgaaatagaagtgtcttcattttggcattt
tgctggagttttatcagttagcacttttcaagaaaataatttctgaaact
gttgagatggtctttttttttttctaagtataaatctctacaaaattaac
caccttcttaatgaagaggacaagcaaaagaaagtttcaatttactaatg
aatttgcaaattccagaagcttgggattaagagtttatttgcctatgaaa
acaatatgcacgcacacgcacacacacacacacacacacacacacacaca
cacacaccacatgtttccatttgtaaacatgcagagggctgactgtaata
ttgaagactttgggaattcagagagagtttattctggtacaaccactttt
cattctggggtgggaaaagacaatttatataaacaaaaatagtagcaata
attattacagcaagttcacatgcaatatgaattggcaggtagtaatatgt
tgagcatcacttctttggagaagggttaaagttggtccatgagccactaa
gtccttagttccctagaacatacttaaaagcacagcctggtcctctctag
gctggacaagaagctctgttgatgtttgcagaaccttgcctagggtgtaa
gaagaagccagtgtggtcaa
gaattccagagtggttgtacaagcttgcaatcccaccaacaatggaggag
tgttcctctttctccacatcctcgccagcatctgctgtcccctgaatttt
tgatcttagccgttctgactggtgtgaggtggaatctcagggttgttttg
atttgcatttccctgatgattaaggatgctgaacattttttcagatgctt
ctcagccattcggtaatcctcaggtgagaattctttgtttagctctgagc
cccatttttaaatggggttatttgatttttctggagtccaccttcttgag
ttctttatatatattggatattagtcccctatctgatttaggattggtaa
agatcctttcccaatctgttgcctttttgtcttattgatggtgtcttttg
ccttacagaagctttgcaattttatgaggtcccatttgtcgattcttgat
cttacagcacaagccattgctgttctattcaggaatttttcccctgtgcc
catatctttgaggctttcccccactttctcctctataagtttcactgtct
ctggttttatgtgtagttccttaatccacttagatttgaccttagtacaa
ggagataggaatggatcaattcgcattcttctacatgataactgccagtt
gtgccagcaccatttgttgaaaatgctgtcttttttccactggatggttt
tagctcccttgtcaaagatcaagtgaccatagatgtgtgggttaatttct
gggttttcaattctattccattagtatacttgtctgtcgctataccagta
tcatgccgtttttatcacaatggctctgtagtaaagctttagggttggcc
atggtgattccacctgaggttcttttatccttgagaagatttttgctatc
ctaggttttttgttattccagatgaatttgcaaattgccctttctaattc
gttgaagaattgagttggaattttgatggggagtgcattgaatctgtaga
ttgctttggcagaaggcatttttctataattgatctggccattcatgagc
atggggaatctttcatcttctaagatcttcttaaattcttgtcgaagact
ggagtctatcaatcacaatcttccatttcgtagttaagtacgccaagaat
taatatacttggacggttgtaagggttgtatccaaatatcacatactgtt
gatctcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_126171709_126172787
seq2: B6Ng01-102E07.b_43_1112

seq1  GAATTCTCCTGGAGCCAAGCACACAATTCAGCCATCTATTTCCTTCTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGGAGCCAAGCACACAATTCAGCCATCTATTTCCTTCTACC  50

seq1  AATGAACTAGACCAGTGCCCATGCAGCCTAGTATCCTACCATGCTACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTAGACCAGTGCCCATGCAGCCTAGTATCCTACCATGCTACCCT  100

seq1  CCCCCACAGGAGTACTTTAACATCTGACAGTTTCTCTGGACCAGAAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACAGGAGTACTTTAACATCTGACAGTTTCTCTGGACCAGAAAAAT  150

seq1  ATTCTCTCACCAGTAGGAAAACCGCCCCCACACTATCTGAGATCAGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCACCAGTAGGAAAACCGCCCCCACACTATCTGAGATCAGAGTT  200

seq1  CACATCAGTGCCTCTGTGTGAGCCAGATTTGCCTGTTGTACAAAAGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAGTGCCTCTGTGTGAGCCAGATTTGCCTGTTGTACAAAAGGGAG  250

seq1  GCAGGTGGCCATAGAACAGAGGGAGTCTGTGACCGTCAGATCAGTGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGCCATAGAACAGAGGGAGTCTGTGACCGTCAGATCAGTGGCAG  300

seq1  CAAGGCTGCTAGAATTCCCACCTAAGTCCATCATCTCCAGTGAATAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTGCTAGAATTCCCACCTAAGTCCATCATCTCCAGTGAATAAAAT  350

seq1  TAAATTAACACCTTGTTCTTCACTGGGTAAAAAATTAGCACCATGTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAACACCTTGTTCTTCACTGGGTAAAAAATTAGCACCATGTTCCC  400

seq1  TACCTTCTCTTCGGGGTATCTGAAATAGAAGTGTCTTCATTTTGGCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCTCTTCGGGGTATCTGAAATAGAAGTGTCTTCATTTTGGCATTT  450

seq1  TGCTGGAGTTTTATCAGTTAGCACTTTTCAAGAAAATAATTTCTGAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGTTTTATCAGTTAGCACTTTTCAAGAAAATAATTTCTGAAACT  500

seq1  GTTGAGATGGTCTTTTTTTTTTTCTAAGTATAAATCTCTACAAAATTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGATGGTCTTTTTTTTTTTCTAAGTATAAATCTCTACAAAATTAAC  550

seq1  CACCTTCTTAATGAAGAGGACAAGCAAAAGAAAGTTTCAATTTACTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTTAATGAAGAGGACAAGCAAAAGAAAGTTTCAATTTACTAATG  600

seq1  AATTTGCAAATTCCAGAAGCTTGGGATTAAGAGTTTATTTGCCTATGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCAAATTCCAGAAGCTTGGGATTAAGAGTTTATTTGCCTATGAAA  650

seq1  ACAATATGCACGCACACGCACACACACACACACACACACACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATGCACGCACACGCACACACACACACACACACACACACACACACA  700

seq1  CACACACCACATGTTTCCATTTGTAAACATGCAGAGGGCTGACTGTAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCACATGTTTCCATTTGTAAACATGCAGAGGGCTGACTGTAATA  750

seq1  TTGAAGACTTTGGGAATTCAGAGAGAGTTTATTCTGGTACAACCACTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGACTTTGGGAATTCAGAGAGAGTTTATTCTGGTACAACCACTTTT  800

seq1  CATTCTGGGGTGGGAAAAGACAATTTATATAAACAAAAATAGTAGCAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGGGGTGGGAAAAGACAATTTATATAAACAAAAATAGTAGCAATA  850

seq1  ATTATTACAGCAAGTTCACATGCAATATGAATTGGCAGGTAGTAATATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTACAGCAAGTTCACATGCAATATGAATTGGCAGGTAGTAATATGT  900

seq1  TGAGCATCACTTCTATTGGAGAAGGGGTTAAAGTTTGGTCCATGAGCCAC  950
      |||||||||||||| |||||||| ||||||||| ||||||||||||||||
seq2  TGAGCATCACTTCT-TTGGAGAA-GGGTTAAAG-TTGGTCCATGAGCCAC  947

seq1  TAAGTCCTTAGTTCCCTAGAACATACTTAAAATGCACAGCCTGGGTCCTC  1000
      |||||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  TAAGTCCTTAGTTCCCTAGAACATACTTAAAA-GCACAGCCT-GGTCCTC  995

seq1  TCTAGGCCTGGACACAGAGCTCTGTGGATGTTTGCAGAACACTGGCCTAG  1050
      |||||| |||||||   |||||||| |||||||||||||| || ||||||
seq2  TCTAGG-CTGGACAAGAAGCTCTGTTGATGTTTGCAGAAC-CTTGCCTAG  1043

seq1  GTGTTGTAGAGAGAAGCCAGTGTGGTCAA  1079
        | ||||   ||||||||||||||||||
seq2  --GGTGTAAGAAGAAGCCAGTGTGGTCAA  1070