BAC Information

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BAC

Clone NameB6Ng01-102I03
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102I03.bB6Ng01-102I03.g
ACCDH911382DH911383
length1,0201,220
definitionDH911382|Mus musculus domesticus DNA, BAC clone: B6Ng01-102I03, 5' end.DH911383|Mus musculus domesticus DNA, BAC clone: B6Ng01-102I03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaacttaggaataccgaatggctgagaagcacctgaaacaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tacacctcacaccaatcagaatggctaagatcaaaaattcaggtgacagc
agatactggcgaggatatggagaaagaggaacactccccactgctggtgg
gattgcaagctggtacaaccactctggaagtcagtctggaggttcctcag
aaaattggacataaaactaacagaagatccagcaatacctctcctgggca
tatacccagaagaagctccaactggtaataagaacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaaggatggatacagaaaatgtagtacatttacacaatgg
agtactactcagctattaaaaacaatggatttatgaaattttggacaaat
ggatgcatctggagaatattatccttagtgaggtagcccaatcacaaaag
aagtcattagatatgcactcactaataagtggatattatcccagaaacat
agaacacccaagatacaatttgcataacacaagaaaatcaagaagaggga
agactaatgggtggatacttcattcctccttagaatagggaacaaaatac
ccatgaaaggagttacagagacaaaatttggagctaagacataaggatgg
actattcagagactactccacccagggatccatcccatagtcagccacca
aacccagacactattgcatatgccagaaagatttttctgaagggaccctg
ttatagctgtcttatatgaggctatgccagtgcctggcaaatacagaagt
ggatgctcacagtcatctataggatggaacacagggccccaatggagaag
ctagaaaagcacccaaggagctgaagggtctgcaaccctataggtaacag
aatatgaactaaccagtacc

gaattccagtttttctaggtcctacatggcacagatgcaggggccagaag
gctaagtggttgagggaaagcaactctgtagaacactgcttacattttca
gtactcccattccgagtctgtagagtttcagtaggctcataattcacact
tccagagttttccaggagaaaactcacattttgaactgagaaaataaaga
tttaaaaaaataaataaataaagagagagagaaacaaaaatatgagctga
ggattcaattgaaaggagtctctgcttaaagtcagtcatccagagatgtg
ttctcctatgtttagccactgaggtgaacagccgtggcaggaagccagat
tgtatatcaagccggcagccaaactgctttttcagtcacgcaaaatacaa
gagttacagcatcatggaagatttcaccaagttaccagaaaggtgataag
gccatagcagattagaattcctgtaggcagcttttaagttggatgggaat
aacaaaaaaccgaggatagcaaaaactcttctcaaggataaaagaacctc
tggtggaatcaccatgcctgacctaaagctttactacagagcaattgtga
taaaaactgcatggtactggtatagagacagacaagtggaccaatggaat
agaattgaagacccagaaatgaacccacacacctatggtcacttgatctt
cgacaagggagccaaaaccatccagtggaagaaagacagcattttcaaca
attggtgctggcacaactggttgttatcatgtagaagaatgcgaatcgat
ccatacttatctccttgtactaaggtcaaatctaagtggatcaaggaact
tcacataaaaccagagacactgaaacttatagaggagaaagtggggaaaa
gccttgagatatgggcacaggggaaaaattcctgaacagaacagcaatgg
ctgtgctgtaagatcgaagaattgacaatgggactatgaaactccaaagt
ttctgcaggcaaaagacactgtctatagacaaaagacacaacagactggg
aaaggatccttactatctaatcagatagggactatatcacataataagac
tcagagggtggacttcagaaatcattacccttaaaatgggtcgaactgac
agattccacctgggcttcgaatggcgagagacctgaaatgttccacaccg
tcctctgtaatcactgcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-102I03.b_49_518 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||||||||||||||| ||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACTACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || || | |||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATCCTTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||| ||| ||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTTCTTATTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      ||| || |||||||| ||||||||||| ||||||||||||||||| || |
seq2  TGGAGCTTCTTCTGGGTATATGCCCAGGAGAGGTATTGCTGGATCTTCTG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
       ||||  ||||||||||||||||| ||||| |||||| || |||||||||
seq2  TTAGTTTTATGTCCAATTTTCTGAGGAACCTCCAGACTGACTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||| ||| ||||||||||||| || ||| ||||||||||||||||
seq2  GGTTGTACCAGCTTGCAATCCCACCAGCAGTGG-GGAGTGTTCCTCTTTC  299

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCCATATCCTCGCCAGTATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  349

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||||| |||||||||||| ||||||| ||||||||||||||||||||||
seq2  TTCTGATTGGTGTGAGGTGTAATCTCAAGGTTGTTTTGATTTGCATTTCC  399

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||| ||||||||||||| ||||||||||||||| ||||||||
seq2  CTGATGATTAAAGATGTTGAACATTGTTTCAGGTGCTTCTCAGCCATTCG  449

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||| || |||||||||
seq2  GTATTCCTAAGTTGAGAATTC  470


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