BAC Information

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BAC

Clone NameB6Ng01-102K11
Chromosome10 (Build37)
Map Location 12,949,017 - 12,950,168
singlet/doubletsinglet
Overlap genePhactr2
Upstream geneUtrn, LOC665172, Stx11, Sf3b5, Plagl1, 4930519B02Rik, Ltv1, LOC666829
Downstream geneLOC100039475, Fuca2, Pex3, Deadc1, Aig1, EG666859, Hivep2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102K11.g
ACCDH911482
length1,126
definitionDH911482|Mus musculus domesticus DNA, BAC clone: B6Ng01-102K11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtgtgagagagctgagagtgcgtgtgcatatttgtaagcccag
cagcgaggggcaggaacagacggatgcatccctgagatgctgagcagaca
gtctggctgaaacagtgacccccaggctcactgagatatcctgtctcagg
aaatgatgtggaggctgactgaggacaatctcctgatgtcaccttcaggc
ttcagtacatgcccggtgagggcacacacacacaacacacgtatgtgtac
agaaatgtggcccacatgctaaaatcatggtatttacagatgaaaatagc
atgttaattgctattacaccaaaaaaagagatttttttgttacttttacc
ttaagatacttcatgacacctattggtcagattctaaataatgtatttgc
ttccttaagttaattggtataaaattcattaagtatgatttaactgttgt
gttaagaattaggttatgaggccgctgagatagcacggtgggtgaaacca
tttgccaacaagcctgacagcctgagtttggtccccgggatgcatgtggt
ggaagggagtcctcggccatccacatgccagccattgcacatgctgcatc
ctacacaagcacagatccactccaaacacaaaaataaataggtgtagctt
aaaattagcttaagattttaaagtattgatctctatgccccattttaaaa
aacaactagtgggcagtggtggcgcacgcctttaatctcagcacttggga
ggcagatgcagatggattttggagttcgagaccagcatggtctacaaagt
gagtttcaagacagccagggctacacagagaaaccctgtctcaaaaacac
acacaacacaacaaaaactagtgaaaataaatttaccgaaaataaaatta
ccgaagtttatattactttttaaagaaaataaattgcaatattatttaga
acccataagtggtttcactcatagttaccatgttggttggatttaaatac
tgatgaaatttcatttaaaatttctgtgatctgaataataacgattatta
ctaatgacctctcatctccctgttgatttaaaatcaagcagattttaggt
acaggaacgagagaaatagtgccttt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_12949017_12950168
seq2: B6Ng01-102K11.g_68_1193 (reverse)

seq1  AAAGGCACTATTCATCTTCGTGTCCCTTGTACCTAGAATATTGCTGATTT  50
      ||||||||||||  || |||| |||  |||||||| ||| |   ||||||
seq2  AAAGGCACTATTTCTC-TCGT-TCC--TGTACCTAAAATCTGCTTGATTT  46

seq1  TTAATCAACAGGGCAGATGAGTGTGTCATCAGTAAATAATCTGTTATTAT  100
      | ||||||||||| ||||||| | ||||| ||| ||||||| ||||||||
seq2  TAAATCAACAGGG-AGATGAGAG-GTCATTAGT-AATAATC-GTTATTAT  92

seq1  TCTGGTTCACCAGAAAATTTTACATTGAAATTTTCATCAGTATTTTAAAT  150
      ||  | ||| ||| |||||||| | ||||| ||||||||||||||  || 
seq2  TC-AGATCA-CAG-AAATTTTA-AATGAAA-TTTCATCAGTATTT--AAA  135

seq1  TCCAACCCAACATGGGTAACTATGGAGTGAAACCACTTATGGGTTCTAAA  200
      ||||| ||||||| ||||||||| ||||||||||||||||||||||||||
seq2  TCCAA-CCAACAT-GGTAACTAT-GAGTGAAACCACTTATGGGTTCTAAA  182

seq1  TAATATTTGCATTTATTTTTCTTTAAAAAGTAATATAAACTTTCGGTAAT  250
      ||||| ||||| ||  |||||||||||||||||||||||| |||||||||
seq2  TAATA-TTGCAATTTATTTTCTTTAAAAAGTAATATAAAC-TTCGGTAAT  230

seq1  TTTATTTTCGGTAAATTTATTTTCACTAGTTTTTTGTTGTTGTTGTTGTT  300
      ||||||||||||||||||||||||||||||||    |||||| ||||| |
seq2  TTTATTTTCGGTAAATTTATTTTCACTAGTTT----TTGTTG-TGTTG-T  274

seq1  GTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGAAAC  350
      ||   |||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTGTGTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCTTGAAAC  324

seq1  TCACTTTGTAGACCATGCTGGTCTCGAACTCCAAAATCCATCTGCATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTGTAGACCATGCTGGTCTCGAACTCCAAAATCCATCTGCATCTG  374

seq1  CCTCCCAAGTGCTGGGATTAAAGGCGTGCGCCACCACTGCCCACTAGTTG  450
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCTCCCAAGTGCTGAGATTAAAGGCGTGCGCCACCACTGCCCACTAGTTG  424

seq1  TTTTTTAAAATGGGGCATAGAGATCAATACTTTAAAATCTTAAGCTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAATGGGGCATAGAGATCAATACTTTAAAATCTTAAGCTAATT  474

seq1  TTAAGCTACACCTATTTATTTTTGTGTTTGGAGTGGATCTGTGCTTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTACACCTATTTATTTTTGTGTTTGGAGTGGATCTGTGCTTGTGT  524

seq1  AGGATGCAGCATGTGCAATGGCTGGCATGTGGATGGCCGAGGACTCCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCAGCATGTGCAATGGCTGGCATGTGGATGGCCGAGGACTCCCTT  574

seq1  CCACCACATGCATCCCGGGGACCAAACTCAGGCTGTCAGGCTTGTTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACATGCATCCCGGGGACCAAACTCAGGCTGTCAGGCTTGTTGGCA  624

seq1  AATGGTTTCACCCACCGTGCTATCTCAGCGGCCTCATAACCTAATTCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTCACCCACCGTGCTATCTCAGCGGCCTCATAACCTAATTCTTA  674

seq1  ACACAACAGTTAAATCATACTTAATGAATTTTATACCAATTAACTTAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACAGTTAAATCATACTTAATGAATTTTATACCAATTAACTTAAGG  724

seq1  AAGCAAATACATTATTTAGAATCTGACCAATAGGTGTCATGAAGTATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATACATTATTTAGAATCTGACCAATAGGTGTCATGAAGTATCTT  774

seq1  AAGGTAAAAGTAACAAAAAAATCTCTTTTTTTGGTGTAATAGCAATTAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAAAGTAACAAAAAAATCTCTTTTTTTGGTGTAATAGCAATTAAC  824

seq1  ATGCTATTTTCATCTGTAAATACCATGATTTTAGCATGTGGGCCACATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATTTTCATCTGTAAATACCATGATTTTAGCATGTGGGCCACATTT  874

seq1  CTGTACACATACGTGTGTTGTGTGTGTGTGCCCTCACCGGGCATGTACTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACACATACGTGTGTTGTGTGTGTGTGCCCTCACCGGGCATGTACTG  924

seq1  AAGCCTGAAGGTGACATCAGGAGATTGTCCTCAGTCAGCCTCCACATCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGAAGGTGACATCAGGAGATTGTCCTCAGTCAGCCTCCACATCAT  974

seq1  TTCCTGAGACAGGATATCTCAGTGAGCCTGGGGGTCACTGTTTCAGCCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGACAGGATATCTCAGTGAGCCTGGGGGTCACTGTTTCAGCCAG  1024

seq1  ACTGTCTGCTCAGCATCTCAGGGATGCATCCGTCTGTTCCTGCCCCTCGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTGCTCAGCATCTCAGGGATGCATCCGTCTGTTCCTGCCCCTCGC  1074

seq1  TGCTGGGCTTACAAATATGCACACGCACTCTCAGCTCTCTCACACAGAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGCTTACAAATATGCACACGCACTCTCAGCTCTCTCACACAGAAT  1124

seq1  TC  1152
      ||
seq2  TC  1126