BAC Information

Click to search

BAC

Clone NameB6Ng01-103P13
Chromosome10 (Build37)
Map Location 49,794,765 - 49,917,390
singlet/doubletdoublet
Overlap genenone
Upstream geneGrik2
Downstream geneLOC629652, Ascc3, Sim1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103P13.bB6Ng01-103P13.g
ACCDH912402DH912403
length1,1851,128
definitionDH912402|Mus musculus domesticus DNA, BAC clone: B6Ng01-103P13, 5' end.DH912403|Mus musculus domesticus DNA, BAC clone: B6Ng01-103P13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,794,765 - 49,795,957)(49,916,247 - 49,917,390)
sequence
gaattcctctctctgctttctgcctgcagatgtgagatgctaccatcttt
cctgccacagcagactgtatccccaagaactgtgagcctcacaacctctt
cctaacttaatttgcttatcgtcaaatattaagtcacagcagtgagaaaa
agaattaatacaaagaaagaaataagaacacgcggctatgcattaaattt
tcttcgtaaagttcaaattcatcttagttggctatcccaactgacctaaa
caaaaagagatgggagagagattttaggaatcctttttttctatgtggtt
tgttaaatgtaaccttgctacataaaggtctgagtctaataaactccaag
cccagtactggaatgcagtaaagcgagccctgttgttaccattgcaatga
catttacaaatcattttctatcttagtttgagtttctcagattcacacac
taatttaaatatttcactacaatcagttggcgtggaaagtgattcccaaa
tgccagtagctgagtggaaacaaacgaaagaaatttaaaaccaatgtgtt
acgaatcaagatattcttgtttgtaactgggacttcaaccttttggaatg
aaagagaagacggacttctaagattagtttggtatgagatttaattccca
tcaaaagatcaggagggcagtggcattggatatatgcgggatgaaggcat
gcaggcagagaagcatctgttggcagcagaagcttcaaaccgaagagcta
caagttctacaagtcagaagaagagttgagatctgtgaaaatactaaact
aaggctctagggtgggtatcttgctacttccccttagacaactcatattc
actcacaccatgtgaaagtcaccccatccgatcacctagtcacattgcct
tttgtaataatgcagcacaagagtggaatagagtgtatgtgtaaaatctg
aaaccagaaacggcatgcactgcctttttcctttattgtttgttctatca
cttcctgagaagctcgcctggctagtgctactgcttcttttgtgctacct
gtagagtgacccacaatttccaattcctgagatccaatccaatatactgt
gccctggtcaggtgagcttcccttcactcgaaggatctggacaatcatga
aatgcctagacatctttcctggatcatctgtagca
gaattctccaggcatcattcagggctttgctgcaagtgtcagagggagat
tcaccttaacttcagcaagagggctgtgctgtcaatatatcaggaagctc
tctggttagttgagaggcctagagattgagcaaactgacaggaatgcagg
caacaaggaacatagtgaaggtcacaacaaaggaacagcctagaaaggac
ccactgctactgtgccacactagcaccacccccacctttgtagatgcttc
gtggaatgcaccccaagctgtctttatttctttttgtcacttgtgtgcaa
ttccaaatgcctggcagaatcatcagattagccaagctttagtcacctgc
ccaacctgtaggtgatagcaagaggttgctctgaatcctttagatattca
gagatgaccttgccttttaccacatagggagtttcagatattacacaatg
aagaagctacaaacatggaaactgagagagcagaatatttaggcataaaa
tattcataagaaaaatttaaggtatcttgaaaaggcaatttggttattga
aagaaactacatcaatgatctcagaatagcttgagggcaggggagggggt
cacttcctctctatttgcatacggatgatcttgccagccatttggctttg
tgttgagaattccaatatgttattctgcagttattggaacaaagactggt
tagcatctttctcccatttatttcatttatgtctgataggctttgtggga
atagtctgcaacccaagtcatcagaaagccttttacactttccttctggc
tatgtctgattttcagtatgcttggagtaatcagcttgtttgtttgtttg
tttgttgtttaatggagcacattcaaatcagctcttctccctgccccaac
cccaaaggaaggttgtggttttgaatttattattcactcagagattatgc
atttgtgacaccatatctgaaatgtacactgccaacctatatatcattct
gaaatgatgggacaaagttattcatgcagtaattatagtgttactcctag
ctttcaagcagagaatcagagacatccaggactgtttgaaatcttcttaa
gtagcatgcttacttattatgccaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_49794765_49795957
seq2: B6Ng01-103P13.b_48_1232

seq1  GAATTCCTCTCTCTGCTTTCTGCCTGCAGATGTGAGATGCTACCATCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCTCTGCTTTCTGCCTGCAGATGTGAGATGCTACCATCTTT  50

seq1  CCTGCCACAGCAGACTGTATCCCCAAGAACTGTGAGCCTCACAACCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCACAGCAGACTGTATCCCCAAGAACTGTGAGCCTCACAACCTCTT  100

seq1  CCTAACTTAATTTGCTTATCGTCAAATATTAAGTCACAGCAGTGAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTTAATTTGCTTATCGTCAAATATTAAGTCACAGCAGTGAGAAAA  150

seq1  AGAATTAATACAAAGAAAGAAATAAGAACACGCGGCTATGCATTAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAATACAAAGAAAGAAATAAGAACACGCGGCTATGCATTAAATTT  200

seq1  TCTTCGTAAAGTTCAAATTCATCTTAGTTGGCTATCCCAACTGACCTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCGTAAAGTTCAAATTCATCTTAGTTGGCTATCCCAACTGACCTAAA  250

seq1  CAAAAAGAGATGGGAGAGAGATTTTAGGAATCCTTTTTTTCTATGTGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAGATGGGAGAGAGATTTTAGGAATCCTTTTTTTCTATGTGGTT  300

seq1  TGTTAAATGTAACCTTGCTACATAAAGGTCTGAGTCTAATAAACTCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATGTAACCTTGCTACATAAAGGTCTGAGTCTAATAAACTCCAAG  350

seq1  CCCAGTACTGGAATGCAGTAAAGCGAGCCCTGTTGTTACCATTGCAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTACTGGAATGCAGTAAAGCGAGCCCTGTTGTTACCATTGCAATGA  400

seq1  CATTTACAAATCATTTTCTATCTTAGTTTGAGTTTCTCAGATTCACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACAAATCATTTTCTATCTTAGTTTGAGTTTCTCAGATTCACACAC  450

seq1  TAATTTAAATATTTCACTACAATCAGTTGGCGTGGAAAGTGATTCCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAATATTTCACTACAATCAGTTGGCGTGGAAAGTGATTCCCAAA  500

seq1  TGCCAGTAGCTGAGTGGAAACAAACGAAAGAAATTTAAAACCAATGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTAGCTGAGTGGAAACAAACGAAAGAAATTTAAAACCAATGTGTT  550

seq1  ACGAATCAAGATATTCTTGTTTGTAACTGGGACTTCAACCTTTTGGAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATCAAGATATTCTTGTTTGTAACTGGGACTTCAACCTTTTGGAATG  600

seq1  AAAGAGAAGACGGACTTCTAAGATTAGTTTGGTATGAGATTTAATTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAGACGGACTTCTAAGATTAGTTTGGTATGAGATTTAATTCCCA  650

seq1  TCAAAAGATCAGGAGGGCAGTGGCATTGGATATATGCGGGATGAAGGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGATCAGGAGGGCAGTGGCATTGGATATATGCGGGATGAAGGCAT  700

seq1  GCAGGCAGAGAAGCATCTGTTGGCAGCAGAAGCTTCAAACCGAAGAGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGAGAAGCATCTGTTGGCAGCAGAAGCTTCAAACCGAAGAGCTA  750

seq1  CAAGTTCTACAAGTCAGAAGAAGAGTTGAGATCTGTGAAAATACTAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTACAAGTCAGAAGAAGAGTTGAGATCTGTGAAAATACTAAACT  800

seq1  AAGGCTCTAGGGTGGGTATCTTGCTACTTCCCCTTAGACAACTCATATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCTAGGGTGGGTATCTTGCTACTTCCCCTTAGACAACTCATATTC  850

seq1  ACTCACACCATGTGAAAGTCACCCCATCCGATCACCTAGTCACATTGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACCATGTGAAAGTCACCCCATCCGATCACCTAGTCACATTGCCT  900

seq1  TTTGTAATAATGCAGCACAAGAGTGGAATAGAGTGTATGTGTAAAATCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATAATGCAGCACAAGAGTGGAATAGAGTGTATGTGTAAAATCTG  950

seq1  AAACCAGAAACGGCATGCACTGCCTTTTTCCTTTATTGTTTGTTCTATCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAAACGGCATGCACTGCCTTTTTCCTTTATTGTTTGTTCTATCA  1000

seq1  CTTCCTGAGAAGCTCGCCTGGCTAGTGCTACTGCTTCTTTTGGTGCTTAC  1050
      ||||||||||||||||||||||||||||||||||||||||| |||| |||
seq2  CTTCCTGAGAAGCTCGCCTGGCTAGTGCTACTGCTTCTTTT-GTGC-TAC  1048

seq1  CTGGTAGAGTGACCCACA--TTCCCATTCCTGAGATCCAATCCAATATTA  1098
      || |||||||||||||||  |||| |||||||||||||||||||||| ||
seq2  CT-GTAGAGTGACCCACAATTTCCAATTCCTGAGATCCAATCCAATA-TA  1096

seq1  CTGTGCCCTGGTCAGGTAGAGCTTCTCTTCACTCGAAGGGAATCT-GACA  1147
      ||||||||||||||||| ||||||| |||||||||||||  |||| ||||
seq2  CTGTGCCCTGGTCAGGT-GAGCTTCCCTTCACTCGAAGG--ATCTGGACA  1143

seq1  AAATTCCATG-AATG-CTAGACAATCTTCCTTGTATCCATCTGTAGCA  1193
      |     |||| |||| |||||| ||||| | || || |||||||||||
seq2  A----TCATGAAATGCCTAGAC-ATCTTTCCTGGAT-CATCTGTAGCA  1185

seq1: chr10_49916247_49917390
seq2: B6Ng01-103P13.g_70_1197 (reverse)

seq1  TTCCT-GCATAATAAAAGTAAGCATGCTACATTAAAGAAGATTTCAAACA  49
      ||||| |||||||  |||||||||||||||  | ||||||||||||||||
seq2  TTCCTGGCATAAT--AAGTAAGCATGCTAC--TTAAGAAGATTTCAAACA  46

seq1  GTCCCTTGGATGTCCTCTGA-TCTCTGCTTTGAAAGCTAGGGGTAAACAC  98
      ||||  ||||||| |||||| ||||||| |||||||||||| || |||||
seq2  GTCC--TGGATGT-CTCTGATTCTCTGC-TTGAAAGCTAGGAGT-AACAC  91

seq1  TATAATTACTGCATGAATTAAAACTTTGTCCCATCATTTTCAGAATGATA  148
      ||||||||||||||||||   ||||||||||||||| |||||||||||||
seq2  TATAATTACTGCATGAAT---AACTTTGTCCCATCA-TTTCAGAATGATA  137

seq1  TAATAGGTTGGCAGTGTACATTTCAGAATATGGTGTCACAAATGCATAAT  198
      | |||||||||||||||||||||||| |||||||||||||||||||||||
seq2  T-ATAGGTTGGCAGTGTACATTTCAG-ATATGGTGTCACAAATGCATAAT  185

seq1  CTCTGAGTGGAATAATAAAATTCAAAACCACAACCTTCCTTTGGGGTTGG  248
      |||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  CTCTGAGT-GAATAAT-AAATTCAAAACCACAACCTTCCTTTGGGGTTGG  233

seq1  GGCAGGGAGAAGAGCTGATTTGAATGTGCTCCATTAAACAAACAAACAAA  298
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGCAGGGAGAAGAGCTGATTTGAATGTGCTCCATTAAAC-AACAAACAAA  282

seq1  CAAACAAACAAGCTGATTACTCCAAGCATACTGAAAATCAGACATAGCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAGCTGATTACTCCAAGCATACTGAAAATCAGACATAGCCA  332

seq1  GAAGGAAAGTGTAAAAGGCTTTCTGATGACTTGGGTTGCAGACTATTCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAAGTGTAAAAGGCTTTCTGATGACTTGGGTTGCAGACTATTCCC  382

seq1  ACAAAGCCTATCAGACATAAATGAAATAAATGGGAGAAAGATGCTAACCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCCTATCAGACATAAATGAAATAAATGGGAGAAAGATGCTAACCA  432

seq1  GTCTTTGTTCCAATAACTGCAGAATAACATATTGGAATTCTCAACACAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTTCCAATAACTGCAGAATAACATATTGGAATTCTCAACACAAA  482

seq1  GCCAAATGGCTGGCAAGATCATCCGTATGCAAATAGAGAGGAAGTGACCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATGGCTGGCAAGATCATCCGTATGCAAATAGAGAGGAAGTGACCC  532

seq1  CCTCCCCTGCCCTCAAGCTATTCTGAGATCATTGATGTAGTTTCTTTCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTGCCCTCAAGCTATTCTGAGATCATTGATGTAGTTTCTTTCAA  582

seq1  TAACCAAATTGCCTTTTCAAGATACCTTAAATTTTTCTTATGAATATTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAATTGCCTTTTCAAGATACCTTAAATTTTTCTTATGAATATTTT  632

seq1  ATGCCTAAATATTCTGCTCTCTCAGTTTCCATGTTTGTAGCTTCTTCATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTAAATATTCTGCTCTCTCAGTTTCCATGTTTGTAGCTTCTTCATT  682

seq1  GTGTAATATCTGAAACTCCCTATGTGGTAAAAGGCAAGGTCATCTCTGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATATCTGAAACTCCCTATGTGGTAAAAGGCAAGGTCATCTCTGAA  732

seq1  TATCTAAAGGATTCAGAGCAACCTCTTGCTATCACCTACAGGTTGGGCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAAGGATTCAGAGCAACCTCTTGCTATCACCTACAGGTTGGGCAG  782

seq1  GTGACTAAAGCTTGGCTAATCTGATGATTCTGCCAGGCATTTGGAATTGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTAAAGCTTGGCTAATCTGATGATTCTGCCAGGCATTTGGAATTGC  832

seq1  ACACAAGTGACAAAAAGAAATAAAGACAGCTTGGGGTGCATTCCACGAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGTGACAAAAAGAAATAAAGACAGCTTGGGGTGCATTCCACGAAG  882

seq1  CATCTACAAAGGTGGGGGTGGTGCTAGTGTGGCACAGTAGCAGTGGGTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACAAAGGTGGGGGTGGTGCTAGTGTGGCACAGTAGCAGTGGGTCC  932

seq1  TTTCTAGGCTGTTCCTTTGTTGTGACCTTCACTATGTTCCTTGTTGCCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGGCTGTTCCTTTGTTGTGACCTTCACTATGTTCCTTGTTGCCTG  982

seq1  CATTCCTGTCAGTTTGCTCAATCTCTAGGCCTCTCAACTAACCAGAGAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGTCAGTTTGCTCAATCTCTAGGCCTCTCAACTAACCAGAGAGC  1032

seq1  TTCCTGATATATTGACAGCACAGCCCTCTTGCTGAAGTTAAGGTGAATCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGATATATTGACAGCACAGCCCTCTTGCTGAAGTTAAGGTGAATCT  1082

seq1  CCCTCTGACACTTGCAGCAAAGCCCTGAATGATGCCTGGAGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGACACTTGCAGCAAAGCCCTGAATGATGCCTGGAGAATTC  1128