BAC Information

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BAC

Clone NameB6Ng01-104N19
Chromosome10 (Build37)
Map Location 97,520,887 - 97,522,063
singlet/doubletsinglet
Overlap genenone
Upstream gene4930556N09Rik, EG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG667438, EG432494, Atp2b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104N19.bB6Ng01-104N19.g
ACCDH913040DH913041
length1,2491,185
definitionDH913040|Mus musculus domesticus DNA, BAC clone: B6Ng01-104N19, 5' end.DH913041|Mus musculus domesticus DNA, BAC clone: B6Ng01-104N19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttggactctattgtgatatgtctctattttttaatatctgatc
ttatttatttaggtttcaactctctttcatgtgttaacttagctaaaaga
ttgcccatattaataaaatgtttaaaaaccaactgtttctctccccatga
tgcttattgtttctttttgaccaatgattttgggttttgctactgtcatt
tgtctaagatcctgagggatattattcatttattcaaattttctctgatt
ttcaagtgaaaattctcatagttatatacctttctttaaaaatattctta
ctatatccaaaaattccaatatgttttattattcttttcaccttattcag
gaattttttcaaaagttctttcccaatttattcagtgatttagtgatcac
atatgattattctgtttgattttcatgcagttgtatagtttctcttgata
atgactgctaagtttattctattatgatctgataagatgaaagaaatttc
aacacttttttatttggtaaaacatacctgtcacctaacaggaaacctat
ttcagagaatttatgtagggtatatagatcaatgattactccacagctgt
tggatggatgttccattgtggtctataaagttcatttgatctgtaattct
tcattgattctttgtctgggtgatatatgaatttgtggtcaaagctatga
attttgaacattgaactcaaccaccattattgtatgtggacttttggtct
tttatgctcagtaatcctttctttatgaaattgggtatgctgttatttca
ttcacctgtattattaattattacatattatattgattattctgtttgtt
aatatatggtgaatattttaatatcctgttattactgtttacttcaaatt
gactatactaggtataagatatctactcttacatacatttttgatatcta
tttgcttggtatctttttatctttccactttaaatctatttgaatcttgt
aactgaattatgtttcatgtaaatgacaaaatagtaaacttttgtctttt
gtcttattaggtagccttgcattctttaataacataatcaagacaaattt
ggaattaggaatttctattgccaaagatttatcaatgactgccctcttcc
attgttgttaccaaagttttacaaaatttctctctgtcatacgattggcc
acgtgagtgtggacacatatagacatctctcgatctcactatcacctcg
gaattcaatctgtagacatgaagccattagttcaaacactaatgtcactc
ttattatttatatttttttgaattagagtcttctttgaaaatacatgtct
taaaaggactgccaaccagaacctctcaaaagagaaggcagatgctaggt
ttgtgtatagcttcaatatttataggtatttaagaaagctgacatcttgt
aattggcttaaagttgttcagttttatacataaatgccttaaatgaccca
caaaattgttgccttagggaagaaagttgaactaaagaaataagaaaatg
attaaactaagtggggttttctgtgcatgtaagttactatggatgattta
atgaaaagtatgtcacaattaagatcccccccaaatgacaaagcaaaata
gaatgagtaaaaaccactgtatttggaggaacaacaaattccattataag
ctatcccaaactaaataagaatctggaagctgcaagcaatggctactcta
caaaaatacaaaattattgctttactacttttgaatacacaaaaccttgg
gaagtaactgagttctcacagttgtaagtggaatagtattaatttaaaaa
tctaaaaattaaaggtatagtaattaaacataatttgatttgtcagttgt
atttttattttatgacaattgattatctttgtttatattataatgaatat
tttattgttcataaagtttataaaatataatgaatttatatattttagag
aaaaagaattatgaaagagttaatattgatgtattagtattgaataaaca
gatgaatgcgaaatagtttaaatgaatctgatttttactttaacgatatt
catctaagtttgttagaataatataaactaagactgtcaagtgatttagg
tttaaaacaatttttagtctgaaatctcacttggttttgaagaactcttt
attacgggaaccagaacaccaggaaatacaacataacagtgtagaaaact
gatcaaacttgaatccttttagaggaaaagcagtggtaggaagacattat
aaatggcatataataatgtatataatgtgaagaagctttttcttctttat
gtttgcctttttatttttaccaatttatactaatgggaatggaaatggca
tggcctggaaaaattaaggaacttctctcaagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97520887_97522063
seq2: B6Ng01-104N19.g_68_1252

seq1  GAATTCAATCTGTAGACATGAAGCCATTAGTTCAAACACTAATGTCACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTGTAGACATGAAGCCATTAGTTCAAACACTAATGTCACTC  50

seq1  TTATTATTTATATTTTTTTGAATTAGAGTCTTCTTTGAAAATACATGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTATATTTTTTTGAATTAGAGTCTTCTTTGAAAATACATGTCT  100

seq1  TAAAAGGACTGCCAACCAGAACCTCTCAAAAGAGAAGGCAGATGCTAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGACTGCCAACCAGAACCTCTCAAAAGAGAAGGCAGATGCTAGGT  150

seq1  TTGTGTATAGCTTCAATATTTATAGGTATTTAAGAAAGCTGACATCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATAGCTTCAATATTTATAGGTATTTAAGAAAGCTGACATCTTGT  200

seq1  AATTGGCTTAAAGTTGTTCAGTTTTATACATAAATGCCTTAAATGACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCTTAAAGTTGTTCAGTTTTATACATAAATGCCTTAAATGACCCA  250

seq1  CAAAATTGTTGCCTTAGGGAAGAAAGTTGAACTAAAGAAATAAGAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGTTGCCTTAGGGAAGAAAGTTGAACTAAAGAAATAAGAAAATG  300

seq1  ATTAAACTAAGTGGGGTTTTCTGTGCATGTAAGTTACTATGGATGATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTAAGTGGGGTTTTCTGTGCATGTAAGTTACTATGGATGATTTA  350

seq1  ATGAAAAGTATGTCACAATTAAGATCCCCCCCAAATGACAAAGCAAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGTATGTCACAATTAAGATCCCCCCCAAATGACAAAGCAAAATA  400

seq1  GAATGAGTAAAAACCACTGTATTTGGAGGAACAACAAATTCCATTATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTAAAAACCACTGTATTTGGAGGAACAACAAATTCCATTATAAG  450

seq1  CTATCCCAAACTAAATAAGAATCTGGAAGCTGCAAGCAATGGCTACTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCCAAACTAAATAAGAATCTGGAAGCTGCAAGCAATGGCTACTCTA  500

seq1  CAAAAATACAAAATTATTGCTTTACTACTTTTGAATACACAAAACCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATACAAAATTATTGCTTTACTACTTTTGAATACACAAAACCTTGG  550

seq1  GAAGTAACTGAGTTCTCACAGTTGTAAGTGGAATAGTATTAATTTAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAACTGAGTTCTCACAGTTGTAAGTGGAATAGTATTAATTTAAAAA  600

seq1  TCTAAAAATTAAAGGTATAGTAATTAAACATAATTTGATTTGTCAGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAATTAAAGGTATAGTAATTAAACATAATTTGATTTGTCAGTTGT  650

seq1  ATTTTTATTTTATGACAATTGATTATCTTTGTTTATATTATAATGAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTTATGACAATTGATTATCTTTGTTTATATTATAATGAATAT  700

seq1  TTTATTGTTCATAAAGTTTATAAAATATAATGAATTTATATATTTTAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTTCATAAAGTTTATAAAATATAATGAATTTATATATTTTAGAG  750

seq1  AAAAAGAATTATGAAAGAGTTAATATTGATGTATTAGTATTGAATAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAATTATGAAAGAGTTAATATTGATGTATTAGTATTGAATAAACA  800

seq1  GATGAATGCGAAATAGTTTAAATGAATCTGATTTTTACTTTAACGATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATGCGAAATAGTTTAAATGAATCTGATTTTTACTTTAACGATATT  850

seq1  CATCTAAGTTTGTTAGAATAATATAAACTAAGACTGTCAAGTGATTTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAGTTTGTTAGAATAATATAAACTAAGACTGTCAAGTGATTTAGG  900

seq1  TTTAAAACAATTTTTAGTCTGAAATCTCACTTGGTTTTGAAGAACTCTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACAATTTTTAGTCTGAAATCTCACTTGGTTTTGAAGAACTCTTT  950

seq1  ATTACGGGAACCAGAACACCAGGAAATACAACATAACAGTGTAGAAAACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACGGGAACCAGAACACCAGGAAATACAACATAACAGTGTAGAAAACT  1000

seq1  GATCAAACTTGAAT-CTTCTAGA-GAAAAGCAGGTGGTAGGAAGACATTA  1048
      |||||||||||||| ||| |||| |||||||| |||||||||||||||| 
seq2  GATCAAACTTGAATCCTTTTAGAGGAAAAGCA-GTGGTAGGAAGACATT-  1048

seq1  ATAAAT-GCATATAATAATGTATAATAAT-TGAAGAA--CTTTTCTTCTT  1094
      |||||| |||||||||||||||| ||||| |||||||   ||||||||||
seq2  ATAAATGGCATATAATAATGTAT-ATAATGTGAAGAAGCTTTTTCTTCTT  1097

seq1  TATGTTTACATTTTTA-TTTTACCAA-TTATAATAAATGAGAATGAAAAT  1142
      ||||||| | |||||| ||||||||| ||||| | |||| ||||| ||||
seq2  TATGTTTGCCTTTTTATTTTTACCAATTTATACT-AATGGGAATGGAAAT  1146

seq1  AGCAT-GCCTG--AAAATTAAGGAAC-TCTCTCAAGTCA  1177
       |||| |||||  ||||||||||||| ||||||||||||
seq2  GGCATGGCCTGGAAAAATTAAGGAACTTCTCTCAAGTCA  1185