BAC Information

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BAC

Clone NameB6Ng01-105C12
Chromosome10 (Build37)
Map Location 38,104,236 - 38,105,340
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100040915, Lama4, 1700025K23Rik, Tube1, EG624165, LOC100040964, Fyn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105C12.bB6Ng01-105C12.g
ACCDH913254DH913255
length1,0861,096
definitionDH913254|Mus musculus domesticus DNA, BAC clone: B6Ng01-105C12, 5' end.DH913255|Mus musculus domesticus DNA, BAC clone: B6Ng01-105C12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagcttttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctcggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
taatgggggattgcattgaatctgtagattgcttttggcaagatagccat
tttttacaatgtttgttcctgccaatccatgagcatgggagatctttcca
tcttctgagatcttcttaatttcttcttcagggacttgaagttttatcat
acagatctttcccttccttcgttagagtcacgccgagatacttaatatta
cttgtggctattgagaagggtggttgttttcctaattttctttcttcatc
ctggttatcttgggaaacaaggctatggacttgcttgagttaaattttaa
tatccagttaactcatccggaacctgtttatcaggg
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgcattcatt
aatatgtttatgtactttcccttgaattcctgacatttctgttacttttc
taggaacaaatactgtgccacaccaagctcatagtaaagctgagcaagat
actgtgatgtgcttattattttcaaactgattccccatactcacttaata
ttatgaataacagactaataaaaatggctcagcagtggctaaaggcaatt
tctgtgcaagcattatgacatgagttagatcaggagaagtgaagatggaa
agggacaagagtatcctgacagccacagtatgctttgtggcacatgtgca
cccggacacatgctcatcatatataaatattataataataagtggaaact
ttaaaagtaaatttaaattttcctgttacgtcacagtaaggttccaaatg
gataagaatccttataattaggtcaaacggggttttatttttattttaaa
aattaagcatttctatttgagtatatttagtagaatgaagcaaaaatagt
ttcaaataagatttctattttggttttaccatacttttattttctttctt
atattaaaagttggatatattaggagtttgctgagtggagttctaatctt
accaacttcggatctttagtccctcatagcttcggagaaaaagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_38104236_38105340
seq2: B6Ng01-105C12.g_71_1166 (reverse)

seq1  TTTCTTTTTCTACTGGAGCTATGTAGGGGACTGTAAAGATACAGAAGTTA  50
      ||||||||||| | | |||||||   |||||  ||||||| | |||||| 
seq2  TTTCTTTTTCT-CCGAAGCTATG--AGGGAC--TAAAGAT-CCGAAGTTG  44

seq1  GTATGAATTAGAGACT-CACTCAGCAAACTCCTATATTAACTCAACTTTT  99
      ||| | |||||| ||| ||||||||||||||||| ||  |  ||||||||
seq2  GTAAG-ATTAGA-ACTCCACTCAGCAAACTCCTA-ATATATCCAACTTTT  91

seq1  AATATAAGAAAGAAGATAAAAGGTATAGTTAAAACAAAATAGAAATCTTA  149
      |||||||||||||| |||||| |||| || ||| ||||||||||||||||
seq2  AATATAAGAAAGAAAATAAAA-GTATGGTAAAACCAAAATAGAAATCTTA  140

seq1  TTTGGAAACTA-TTTTGCTTCATTTCTACTAAATATACTCAAAATAGAAA  198
      ||| ||||||| |||||||||| ||||||||||||||||| |||||||||
seq2  TTT-GAAACTATTTTTGCTTCA-TTCTACTAAATATACTC-AAATAGAAA  187

seq1  TGCTTAA-TTTTAAAATAAAAATAAAACCCCGTTTGAACTAATTATAAGG  247
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCTTAATTTTTAAAATAAAAATAAAACCCCGTTTGACCTAATTATAAGG  237

seq1  ATTCTTATCCATTTGGAAACTTACTGTGACGTAACAGGAAAATTTAAATT  297
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATTCTTATCCATTTGGAACCTTACTGTGACGTAACAGGAAAATTTAAATT  287

seq1  TACTTTTAAAGTTTCCACTTATTATTATTATATTTATATATGATGAGCAT  347
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TACTTTTAAAGTTTCCACTTATTATTATAATATTTATATATGATGAGCAT  337

seq1  GTGTCCGGGTGCACATGTGCCACAAAGCATACTGTGGCTGTCAGGATACT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCGGGTGCACATGTGCCACAAAGCATACTGTGGCTGTCAGGATACT  387

seq1  CTTGTCCCTTTCCATCTTCACTTCTCCTGATCTAACTCATGTCATAATGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCCTTTCCATCTTCACTTCTCCTGATCTAACTCATGTCATAATGC  437

seq1  TTGCACAGAAATTGCCTTTAGCCACTGCTGAGCCA-TTTTATTAGTCTGT  496
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGCACAGAAATTGCCTTTAGCCACTGCTGAGCCATTTTTATTAGTCTGT  487

seq1  TATTCATAATATTAAGTGAGTATGGGGAATCAGTTTGAAAATAATAAGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATAATATTAAGTGAGTATGGGGAATCAGTTTGAAAATAATAAGCA  537

seq1  CATCACAGTATCTTGCTCAGCTTTACTATGAGCTTGGTGTGGCACAGTAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAGTATCTTGCTCAGCTTTACTATGAGCTTGGTGTGGCACAGTAT  587

seq1  TTGTTCCTAGAAAAGTAACAGAAATGTCAGGAATTCAAGGGAAAGTACAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTAGAAAAGTAACAGAAATGTCAGGAATTCAAGGGAAAGTACAT  637

seq1  AAACATATTAATGAATGCAATTGGTGCTGGCACAACTGGTTGTTATCGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATTAATGAATGCAATTGGTGCTGGCACAACTGGTTGTTATCGTG  687

seq1  TAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAAT  737

seq1  CTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATA  787

seq1  GAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATT  837

seq1  CCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGACAAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATCGACAAAT  887

seq1  GGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAAT  937

seq1  AAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAA  987

seq1  ATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGG  1037

seq1  ACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAAC  1087

seq1  AAAGAATTC  1105
      |||||||||
seq2  AAAGAATTC  1096