BAC Information

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BAC

Clone NameB6Ng01-105F23
Chromosome10 (Build37)
Map Location 104,053,534 - 104,054,203
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105F23.bB6Ng01-105F23.g
ACCDH913414DH913415
length1,200975
definitionDH913414|Mus musculus domesticus DNA, BAC clone: B6Ng01-105F23, 5' end.DH913415|Mus musculus domesticus DNA, BAC clone: B6Ng01-105F23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgaagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctaacctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatttcatgagcatgggagatctttccatct
tctgagatcttccttaatttcttttcttcagagatttgaagtttttatca
tacagatctttcgcttccttagttagagtcacgccagatattttatatta
ttgtgactattgagaaggtgttgtttcctaatttcttctcagcctgttta
ttctttgtatagaagaaaggccatgacttggttgagtttatttatattca
gctacttcacgaagctgttttatcaggttaggagtctctggtagatgtag
ggtccttaatatactatctatcattgcaaaagtgaaatggactctctttt
ccaattgtatcgctgatcctttgatgcgcatggctcggctcaatagatca


gaattctgtaaatttctcatatagacatgacctaaggcatgtcaacatgc
ctgaattccagtgtggctcatctgaactcttttctcattggtggcaagta
acagtccctcagttctttaacttatttgacgggcatgcccttcccccagc
cttgagcaggctaaatagaccttaactgtttgccacagttggaccagaaa
gacccaggtcgagtcaatttcttacaggagtagactgtccgatgagcttg
ctttgtaactcaatccaggtgaaacaaaggatgcgtctgtgggctctcct
tatataaacacagtgctgactattaaactttgaaccttgatcaggatttt
ttgtcttgacttcatccttctcttgtaccctgtccttttcattcccagcc
ccacttccaggtaacccagttcatccatggctgctggacagctacagatg
ggttagtattcagtctttgttctgctttaaaaatactttttgaggatgtg
gagaaagaggaacactcctccattgttggtgggattgcaagcttgtaaaa
ccactctggaaatcagtctggccattcctcagaaaattggacatagtact
accagaggatcctgcaatacctctcctgggcatatatccagaagatgttc
caacctgtaagaaggacacatgctccactatgttcatagcagccttattt
ataacaaccagaagctggaaagaacccagatgcccctcaacagaggaatg
gatacagaaaatgtggtacatttacacaatggactactactcagctatta
aaaagaatgaatttatgaaattcctagggcaaatggatggacctggaggg
catcatcctgagtgagctaacccaatcacagaagactcacacaatatgta
ctcactgatagtggatatagcccagaaacttagaatacccaggtacagat
atgatttgcaaatacatgaactcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053534_104054203
seq2: B6Ng01-105F23.g_558_1018 (reverse)

seq1  ATATCT-----TGGGTATCCTAAGTTTCTGGGCTAATATCCACTTATCAG  45
      ||||||     ||||||| ||||||||||||||| |||||||| ||||||
seq2  ATATCTGTACCTGGGTATTCTAAGTTTCTGGGCT-ATATCCAC-TATCAG  48

seq1  TGAGTACATATTGCGCGAGTTCCTTTGTGATTGGGTTACCGCACTCAGGA  95
      ||||||||||||| | ||| || | ||||||||||||| | |||||||||
seq2  TGAGTACATATTGTGTGAG-TCTTCTGTGATTGGGTTAGCTCACTCAGGA  97

seq1  TGATACTCTCCAGGTCCATCCATTTG-CCTAGGAATTTCATAAATTCATT  144
      |||| | ||||||||||||||||||| |||||||||||||||||||||||
seq2  TGATGCCCTCCAGGTCCATCCATTTGCCCTAGGAATTTCATAAATTCATT  147

seq1  CTTTTTAATAGCTCCATTTACATTTAATTTAATTAATGTAATTACAATTA  194
      ||||||||||||                                      
seq2  CTTTTTAATAGC--------------------------------------  159

seq1  ATTAATTTATTAATTAAATAATTTAATAATTTAATTGATAAATTAATTTA  244
                                                        
seq2  --------------------------------------------------  159

seq1  ATTAATTAATTTAATTAATTAAATTAAATAATAATTTAATAATAAATTAA  294
                                                        
seq2  --------------------------------------------------  159

seq1  ATATTTTAAAATTAATAATAATTTTATAAGTAAATAATTTAATTAATGTA  344
                                | ||||                  
seq2  --------------------------TGAGTA------------------  165

seq1  ATTTAATTAATGTAATTACATTACATTTAATAGCTCCATTGTGTAAATGT  394
                 |||                    ||||||||||||||||
seq2  -----------GTA-------------------GTCCATTGTGTAAATGT  185

seq1  ACCACATTTTCTGTATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTC  444
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTC  235

seq1  CAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATATAGTGGAGCATGT  494
      ||||| |||| | |||||||||||||||||||||| ||||||||||||||
seq2  CAGCTTCTGGTTGTTATAAATAAGGCTGCTATGAACATAGTGGAGCATGT  285

seq1  GTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTA  544
      ||||||||||| ||||||  |||||||||||||||||||||| |||||||
seq2  GTCCTTCTTACAGGTTGGAACATCTTCTGGATATATGCCCAGGAGAGGTA  335

seq1  TTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGACGAACCGCCAG  594
      |||| |||||||| ||||||||||||||||||||||||| |||  |||||
seq2  TTGCAGGATCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAATGGCCAG  385

seq1  ACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAG  644
      || |||||||||||||||| ||||||| ||||||||||||||||||||||
seq2  ACTGATTTCCAGAGTGGTTTTACAAGCTTGCAATCCCACCAACAATGGAG  435

seq1  GAGTGTTCCTCTTTCTCCACATCCTC  670
      ||||||||||||||||||||||||||
seq2  GAGTGTTCCTCTTTCTCCACATCCTC  461


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