BAC Information

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BAC

Clone NameB6Ng01-106J14
Chromosome10 (Build37)
Map Location 129,072,932 - 129,073,985
singlet/doubletsinglet
Overlap genenone
Upstream geneIkzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798
Downstream geneOlfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106J14.bB6Ng01-106J14.g
ACCDH914294DH914295
length1,0521,175
definitionDH914294|Mus musculus domesticus DNA, BAC clone: B6Ng01-106J14, 5' end.DH914295|Mus musculus domesticus DNA, BAC clone: B6Ng01-106J14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacctaggtcattttaaactcatgtttatctaacattcatcatt
ttcccctctaacatatgagtagtttccaaaaccacaaattccacaagtgt
ttagatctcagacttgtagatatttatctcctttcatgaggagtgccttt
ctttctcatcctttattgcattcagatggctctaatttctctccatgttc
ttaaataagtgaaataatttaactgaattgagagctgtaatgtgtttgag
aagatcaacccagaaacaacagaaaagtgaattgtttccaatgaatctgt
tcagagtgactgagcaactgcatgttagatgaataaataaaatgaccgta
atttcattgaataaaagaacaaattagtaacagactctgataaatattgc
taagaaatacatattctctattcttgttatttctttctatgtggatatac
attctggtaaagtataattttcaaaaaaaaataaaatgtcatttatacaa
atagaatatgtatttgaatcaaataagactattttgctcaattaacttat
cagtgacaccaggtggcaaacctgtctaaaagaataattcaggggacata
tgctatgtgattacatgtctgttacataattttctaacatgtgttaagct
acttaattacctatgccattttagtgattattttttcaattataaactag
gtgtaagtcatatattctaaacgctaggcaaaaagcaacattaagcatgt
acacatttttttgtaagtttcaatatcttccagatgtcctgttgaacagt
tttataaagtcataaacttgaatttttctttatttctaagatttcaaaaa
tatttcctaaatttatgtgagaagttttcctggactcttcctcctatctg
tttccttgtgtcgaaaaagtgacattttgcagctgagtttttatcaagaa
tatttgttacttagaattttgttttatcaattaaatgtattctttaatat
atatatatatatatatatatatatatatatatatatatatatatacatgt
tt
gaattcttatagtactaagtcaagagaaagaaactaaatgggtacaaata
gaaaaaatgtcagatttccctgtagttacacatgtctgtattctatactt
agaaaactcttgaatactgcatcagaatatatttagataatgatcaaatc
taggaaaatagcagaagatatcaatctataaaaatatgcggcttttcaga
tagaacaacattatcaataagaaagaaatcatgtaaacaatttcatctta
agttattttttaacaaagtacctacaaaactagtaagaaaatgtaacatc
cataataaaaataaactgaaggaaaatatcataagatactcaatcatgca
aaagaatcccatgttcaataaattgaacaaattacagtggccatattctc
tgaagcaatccacagactcagtataatcacaatcaaaacatccatggaat
tctttatagcagcagaaaattaataccaaaattcatataaaatcaccaca
gattcaacataccaaacatatcttgacaaaataaagaacaatgctgaggt
ttctcaatagacaattaaaatttatacttcaaacccattgtgagaaaaaa
taattaattgtattggcatagaaatgagcaaatgactaatacatatagat
acagccataagactcttgacaaattgtcataaacaaatggtaaacaagag
acagacttataatggatagggtacatctaagtgtaacacattaaaaacta
gattccttttataaaattagattcaagatcgtttttggtgtctttcatgt
tatcctaacagtttcaaaacctgatagaagtttcctccaatatgaaatct
agccatccaggcttagacttccacattaatccacttttatctctgtatgt
attttacatgtatttatctctctaaagcatggtgtattttgaacatattg
tctcgttatttatgtatgatgggaaactgagagatggcaatagtctgttt
gtttagggaggacgggcatagatatctctcacactctagaagagcttcac
acttttgaactgaaattttctttagtaacacatggttctggatcagatat
cattgagcagatggctaggttcacttcttctctcttctcttgctatctca
tctcatcttctcatctgatgctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129072932_129073985
seq2: B6Ng01-106J14.b_44_1095

seq1  GAATTCAACCTAGGTCATTTTAAACTCATGTTTATCTAACATTCATCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTAGGTCATTTTAAACTCATGTTTATCTAACATTCATCATT  50

seq1  TTCCCCTCTAACATATGAGTAGTTTCCAAAACCACAAATTCCACAAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCTAACATATGAGTAGTTTCCAAAACCACAAATTCCACAAGTGT  100

seq1  TTAGATCTCAGACTTGTAGATATTTATCTCCTTTCATGAGGAGTGCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATCTCAGACTTGTAGATATTTATCTCCTTTCATGAGGAGTGCCTTT  150

seq1  CTTTCTCATCCTTTATTGCATTCAGATGGCTCTAATTTCTCTCCATGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCATCCTTTATTGCATTCAGATGGCTCTAATTTCTCTCCATGTTC  200

seq1  TTAAATAAGTGAAATAATTTAACTGAATTGAGAGCTGTAATGTGTTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAAGTGAAATAATTTAACTGAATTGAGAGCTGTAATGTGTTTGAG  250

seq1  AAGATCAACCCAGAAACAACAGAAAAGTGAATTGTTTCCAATGAATCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAACCCAGAAACAACAGAAAAGTGAATTGTTTCCAATGAATCTGT  300

seq1  TCAGAGTGACTGAGCAACTGCATGTTAGATGAATAAATAAAATGACCGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTGACTGAGCAACTGCATGTTAGATGAATAAATAAAATGACCGTA  350

seq1  ATTTCATTGAATAAAAGAACAAATTAGTAACAGACTCTGATAAATATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTGAATAAAAGAACAAATTAGTAACAGACTCTGATAAATATTGC  400

seq1  TAAGAAATACATATTCTCTATTCTTGTTATTTCTTTCTATGTGGATATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATACATATTCTCTATTCTTGTTATTTCTTTCTATGTGGATATAC  450

seq1  ATTCTGGTAAAGTATAATTTTCAAAAAAAAATAAAATGTCATTTATACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGTAAAGTATAATTTTCAAAAAAAAATAAAATGTCATTTATACAA  500

seq1  ATAGAATATGTATTTGAATCAAATAAGACTATTTTGCTCAATTAACTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATATGTATTTGAATCAAATAAGACTATTTTGCTCAATTAACTTAT  550

seq1  CAGTGACACCAGGTGGCAAACCTGTCTAAAAGAATAATTCAGGGGACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACACCAGGTGGCAAACCTGTCTAAAAGAATAATTCAGGGGACATA  600

seq1  TGCTATGTGATTACATGTCTGTTACATAATTTTCTAACATGTGTTAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGTGATTACATGTCTGTTACATAATTTTCTAACATGTGTTAAGCT  650

seq1  ACTTAATTACCTATGCCATTTTAGTGATTATTTTTTCAATTATAAACTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATTACCTATGCCATTTTAGTGATTATTTTTTCAATTATAAACTAG  700

seq1  GTGTAAGTCATATATTCTAAACGCTAGGCAAAAAGCAACATTAAGCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGTCATATATTCTAAACGCTAGGCAAAAAGCAACATTAAGCATGT  750

seq1  ACACATTTTTTTGTAAGTTTCAATATCTTCCAGATGTCCTGTTGAACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTTTTTGTAAGTTTCAATATCTTCCAGATGTCCTGTTGAACAGT  800

seq1  TTTATAAAGTCATAAACTTGAATTTTTCTTTATTTCTAAGATTTCAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAGTCATAAACTTGAATTTTTCTTTATTTCTAAGATTTCAAAAA  850

seq1  TATTTCCTAAATTTATGTGAGAAGTTTTCCTGGACTCTTCCTCCTATCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTAAATTTATGTGAGAAGTTTTCCTGGACTCTTCCTCCTATCTG  900

seq1  TTTCCTTGTGTCGAAAAAAGTGACA-TTTGCAGCTGAGTTTTTATCAAGA  949
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  TTTCCTTGTGTCG-AAAAAGTGACATTTTGCAGCTGAGTTTTTATCAAGA  949

seq1  ATATTTGTAACTTAGGAATTTTGTTTTATCAATTAAATGTATTCTTTAAA  999
      |||||||| ||||| |||||||||||||||||||||||||||||||| ||
seq2  ATATTTGTTACTTA-GAATTTTGTTTTATCAATTAAATGTATTCTTT-AA  997

seq1  TATATATATATATATATATATATATATATATATATATATATATATATACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATATATATATATATACA  1047

seq1  TGTTT  1054
      |||||
seq2  TGTTT  1052