BAC Information

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BAC

Clone NameB6Ng01-107E04
Chromosome10 (Build37)
Map Location 103,037,948 - 103,039,101
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697
Downstream geneLOC667701, EG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107E04.bB6Ng01-107E04.g
ACCDH914773DH914774
length1,135612
definitionDH914773|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E04, 5' end.DH914774|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgttaaggttgtgaattctatcacaagcccatccaatagagca
cactttaagaactgaaagatcatatatgcctctcagaaaaattcataatt
tccctacatcctttctagttaaataatgttctattgacagtaatcactac
ttgaattttaccatctttaatattttatcaggtaagaggaaaaaaatcag
gttctttttcctgtcacatctgaattttgttttgaatattagtaatattt
aaattgttcacaagcagtttgtgttgaaacacattgaagcatcagtgttg
acttttttctaatgtgttgtgcaactcagattaagaaccaaataactgaa
aacatatttctggcattatttttagttttaaatcccactaatgtttttaa
atcctctctctgtatctctgtctctgtctctgtctcttctctctctttct
ctctctctctctctctcaatctctctctctctctgaatttcataaattca
ttgttttttaatagctgagtagtattccattgcataaatgtaccacattt
tctgtacccattcctccactgagggacatctgggttctttctagcttctg
gatattataaataaggttgctatgaacatagtgaaacatgtgtccttatt
agatgttggagcatcttctgggtatatgtccaggagtgatattgctggat
cttctggtagaattatgtccaatacaaccactctgaaaatcagtttggtg
gttcctcagaaaattggacatggttgtactggaagatccagaaataccac
ttctgggcatatacccagaagaggaagagattttaaagaaaaaatggtca
aagaaaattcaaaagaaatatgaccccttccgctcgactcgagcccgggc
taccttgccagcagagtcttgcccaacacctgcaaggcccacacgggact
ccccacgggatcctaagacctctgctgagtggaacaaagcgcctgcccaa
tccatcttcgcggacctgagactgcgtacatagggagcagctacccggcc
tgatctgggccaagtcccttccgctcgactgagcccggctacttgcagca
gtcttgccaaacccgcaagggccccacgggactcc

gaattcaatgttggctcttcttgttgggccctgatggtgtgtgtatgttt
gctgatggtgtgtgtatgtgtgctgatggtgtgtgtatgtgtgctgatgg
tgcgtgtatgtgtgctgatggtgtgtgtctgtgtgcatgactgtgtataa
taacgcttcctgagcttcgtagctataatcatttaccttttcagtccaac
taggcttcgcaccacaattcctacctaaagactgacagttggactactct
attgcctgaacatttctaattatccccagcttatctaatgctaattgatg
ataatagatctacactgtagcgataagacctaaaacacttcctcaaataa
taaacttttttccaaactgggtcattatattaatgcttttactaaaaaga
ctcttcaatcgaatttaatgtcttttaaattctctggaatgacacaaaca
gaacctgccctgattcccagttcgcttgagtcccagatctcttatttggg
gtaattgagaatgtgaatccgggtcgtttccactctttctgaatcttaaa
gtttcacaaaagaacgagaaacctttctctgttctatgtcttttattaat
attgattgtaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103037948_103039101
seq2: B6Ng01-107E04.b_46_1180 (reverse)

seq1  GGAGTCCCGTGTGGGCCCTTGCGGGTGTTGGGCAAGACTCTGCTGGCAAG  50
      ||||||||||| ||||||||||||  ||| |||||||  ||||| |||| 
seq2  GGAGTCCCGTG-GGGCCCTTGCGG--GTTTGGCAAGA--CTGCT-GCAA-  43

seq1  GTAGCCCGGGGCTCAAGTCGAGCGGAAGGGACTTGTGCCCCAGATCAGGC  100
      ||||||  |||||| ||||||||||||||||||  || ||||||||||| 
seq2  GTAGCC--GGGCTC-AGTCGAGCGGAAGGGACT--TGGCCCAGATCAGG-  87

seq1  CCGGGTAGCCTGCTTCCCTATGTACCGCAGTCTCAGGTTCCGCGAGATTG  150
      |||||||| |||| |||||||||| |||||||||||| |||||||   ||
seq2  CCGGGTAG-CTGC-TCCCTATGTA-CGCAGTCTCAGG-TCCGCGAAGATG  133

seq1  GATTGGGGCAGGCGCTTTGTTCCACTCAGCAGAGGTCTTAGGATCCCGTG  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GATT-GGGCAGGCGCTTTGTTCCACTCAGCAGAGGTCTTAGGATCCCGTG  182

seq1  GGGAGTCCCGTGTGGGCCCTTGCAGGTGTTGGGCAAGACTCTGCTGGCAA  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGGAGTCCCGTGTGGG-CCTTGCAGGTGTTGGGCAAGACTCTGCTGGCAA  231

seq1  GGTAGCCCGGGCTCGAGTCGAGCGGAAGGGGTCATATTTCTTTTGAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCCCGGGCTCGAGTCGAGCGGAAGGGGTCATATTTCTTTTGAATTT  281

seq1  TCTTTGACCATTTTTTCTTTAAAATCTCTTCCTCTTCTGGGTATATGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGACCATTTTTTCTTTAAAATCTCTTCCTCTTCTGGGTATATGCCC  331

seq1  AGAAGTGGTATTTCTGGATCTTCCAGTACAACCATGTCCAATTTTCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGGTATTTCTGGATCTTCCAGTACAACCATGTCCAATTTTCTGAG  381

seq1  GAACCACCAAACTGATTTTCAGAGTGGTTGTATTGGACATAATTCTACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACCAAACTGATTTTCAGAGTGGTTGTATTGGACATAATTCTACCA  431

seq1  GAAGATCCAGCAATATCACTCCTGGACATATACCCAGAAGATGCTCCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATCCAGCAATATCACTCCTGGACATATACCCAGAAGATGCTCCAAC  481

seq1  ATCTAATAAGGACACATGTTTCACTATGTTCATAGCAACCTTATTTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATAAGGACACATGTTTCACTATGTTCATAGCAACCTTATTTATAA  531

seq1  TATCCAGAAGCTAGAAAGAACCCAGATGTCCCTCAGTGGAGGAATGGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGAAGCTAGAAAGAACCCAGATGTCCCTCAGTGGAGGAATGGGTA  581

seq1  CAGAAAATGTGGTACATTTATGCAATGGAATACTACTCAGCTATTAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATGTGGTACATTTATGCAATGGAATACTACTCAGCTATTAAAAA  631

seq1  ACAATGAATTTATGAAATTCAGAGAGAGAGAGAGATTGAGAGAGAGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAATTTATGAAATTCAGAGAGAGAGAGAGATTGAGAGAGAGAGAG  681

seq1  AGAGAGAAAGAGAGAGAAGAGACAGAGACAGAGACAGAGATACAGAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAAGAGAGAGAAGAGACAGAGACAGAGACAGAGATACAGAGAGA  731

seq1  GGATTTAAAAACATTAGTGGGATTTAAAACTAAAAATAATGCCAGAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTAAAAACATTAGTGGGATTTAAAACTAAAAATAATGCCAGAAATA  781

seq1  TGTTTTCAGTTATTTGGTTCTTAATCTGAGTTGCACAACACATTAGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAGTTATTTGGTTCTTAATCTGAGTTGCACAACACATTAGAAAA  831

seq1  AAGTCAACACTGATGCTTCAATGTGTTTCAACACAAACTGCTTGTGAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAACACTGATGCTTCAATGTGTTTCAACACAAACTGCTTGTGAACA  881

seq1  ATTTAAATATTACTAATATTCAAAACAAAATTCAGATGTGACAGGAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATATTACTAATATTCAAAACAAAATTCAGATGTGACAGGAAAAA  931

seq1  GAACCTGATTTTTTTCCTCTTACCTGATAAAATATTAAAGATGGTAAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGATTTTTTTCCTCTTACCTGATAAAATATTAAAGATGGTAAAAT  981

seq1  TCAAGTAGTGATTACTGTCAATAGAACATTATTTAACTAGAAAGGATGTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTAGTGATTACTGTCAATAGAACATTATTTAACTAGAAAGGATGTA  1031

seq1  GGGAAATTATGAATTTTTCTGAGAGGCATATATGATCTTTCAGTTCTTAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATTATGAATTTTTCTGAGAGGCATATATGATCTTTCAGTTCTTAA  1081

seq1  AGTGTGCTCTATTGGATGGGCTTGTGATAGAATTCACAACCTTAACAAGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTCTATTGGATGGGCTTGTGATAGAATTCACAACCTTAACAAGA  1131

seq1  ATTC  1154
      ||||
seq2  ATTC  1135


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