BAC Information

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BAC

Clone NameB6Ng01-108A17
Chromosome10 (Build37)
Map Location 90,006,416 - 90,007,267
singlet/doubletsinglet
Overlap geneAnks1b
Upstream geneEG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, LOC100043039, LOC544719
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108A17.g
ACCDH915333
length851
definitionDH915333|Mus musculus domesticus DNA, BAC clone: B6Ng01-108A17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgcttttaatttctggcttatggcatatttcagctactcca
agttaaaattctctgcctatctggcttgactcttctaatttaataatgtc
tcacctaataccttggtgattattgttatggtatggatgtaaactgtccc
tcacaggctcatgtgtttacacacttgagccccaaatagttgtgctattt
cgggaggctatgggcctagctggacaaagtgctgagtaatccactttcag
ggatgatgctgttgttcttagtatgcacctagatgcaaactggccaggct
gtaagctcccacaaccaaaactgtacgtactttgtggggatggatctgtc
atctctaccatgatgattgtatttgaatcaagctgacttcttgtcaatta
ttcacccacagcataaaaaaaaaatatcaataaatataactatggctggt
gaccactcttttggcaatggccatggaaggtcttctccattacgcttgct
acaaactgatacccatggcacattgatcccttgaaaaccccacaacagag
gaaaggcgggggcacacgagtgggaatgggtgggtagggaaggactgact
ttctagctcgtctctgggccattcactcccaagaacggtatggctcactt
tttgatctttcctcagtaagtggtgataggcagaagagcggtctccagag
atatctacgccttggtacagggaacaggactctgatgctttataaggcaa
atagtccataggagatgtgggtaagagtgggccctttgagatggggagat
tatcttggatcacctggggtagggggcattctattcatggaattctgaag
a
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90006416_90007267
seq2: B6Ng01-108A17.g_66_916 (reverse)

seq1  TCTTCAGAATTCCCATGGATAGAATGCCCCCTACCCCAGGTGATCCAAGA  50
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  TCTTCAGAATT-CCATGAATAGAATGCCCCCTACCCCAGGTGATCCAAGA  49

seq1  TAATCTCCCCATCTCAAAGGGCCCACTCTTACCCACATCTCCTATGGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCCCCATCTCAAAGGGCCCACTCTTACCCACATCTCCTATGGACT  99

seq1  ATTTGCCTTATAAAGCATCAGAGTCCTGTTCCCTGTACCAAGGCGTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTTATAAAGCATCAGAGTCCTGTTCCCTGTACCAAGGCGTAGAT  149

seq1  ATCTCTGGAGACCGCTCTTCTGCCTATCACCACTTACTGAGGAAAGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGAGACCGCTCTTCTGCCTATCACCACTTACTGAGGAAAGATCA  199

seq1  AAAAGTGAGCCATACCGTTCTTGGGAGTGAATGGCCCAGAGACGAGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGAGCCATACCGTTCTTGGGAGTGAATGGCCCAGAGACGAGCTAG  249

seq1  AAAGTCAGTCCTGTAAAGTAAGCTCTCCCCAC---------CACGTGTCC  291
      ||||||||||||          | || |||||         | ||||| |
seq2  AAAGTCAGTCCT---------TCCCTACCCACCCATTCCCACTCGTGTGC  290

seq1  CACCCCCTTACATCTACTGCTTGCTTTTCAAGGGATCACTTAGACCTTGG  341
      | || |||| | |||  ||   | |||||||||||||| |  | | | ||
seq2  CCCCGCCTTTCCTCTGTTGTGGGGTTTTCAAGGGATCAATGTGCCATGGG  340

seq1  TAGCAGTCTGTAGCATGCCTAATGGTGAAGACCCACCATGGCCATTGCCA  391
      || |||| ||||||| || |||||| |||||||  |||||||||||||||
seq2  TATCAGTTTGTAGCAAGCGTAATGGAGAAGACCTTCCATGGCCATTGCCA  390

seq1  AAGCTGTGGTCACCAGCCATAGTTATATTTATTGCTCTTTTTTTTTTCTG  441
      ||   ||||||||||||||||||||||||||||| | |||||||||| ||
seq2  AAAGAGTGGTCACCAGCCATAGTTATATTTATTGATATTTTTTTTTTATG  440

seq1  CTGTGACTGAATAGCTGACAAGAAGTCAGCTTGATTCAAATACAATCATC  491
      |||||  ||||||  |||||||||||||||||||||||||||||||||||
seq2  CTGTGGGTGAATAATTGACAAGAAGTCAGCTTGATTCAAATACAATCATC  490

seq1  ATGGTAGAGATGACAGCTCGACTGCCACAAAGTACCTACAGTTTTGGTTG  541
      |||||||||||||||| || |   ||||||||||| ||||||||||||||
seq2  ATGGTAGAGATGACAGATCCATCCCCACAAAGTACGTACAGTTTTGGTTG  540

seq1  TTGGAGCTTACAGCCTGGCCTGTTTGCATCTAGGTGCCTACTAAGAACAA  591
      | |||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  TGGGAGCTTACAGCCTGGCCAGTTTGCATCTAGGTGCATACTAAGAACAA  590

seq1  CAGCATCATCCCTGAAAGTGGATTACTCAGCACTTTCTCCAGCTAGGCCC  641
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGCATCATCCCTGAAAGTGGATTACTCAGCACTTTGTCCAGCTAGGCCC  640

seq1  ATAGCCTCCCCTAATAGCACAACTATTTGGGGCTCAAGTGTGTAAACACA  691
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTCCCGAAATAGCACAACTATTTGGGGCTCAAGTGTGTAAACACA  690

seq1  TGAGCCTGTGAGGGACAGTTTACATCCATACCATAACAATAATCACCAAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTGTGAGGGACAGTTTACATCCATACCATAACAATAATCACCAAG  740

seq1  GTATTAGGTGAGACATTATTAAATTAGAAGAGTCAAGCCAGATAGGCAGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAGGTGAGACATTATTAAATTAGAAGAGTCAAGCCAGATAGGCAGA  790

seq1  GAATTTTAACTTGGAGTAGCTGAAATATGCCATAAGCCAGAAATTAAAAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTAACTTGGAGTAGCTGAAATATGCCATAAGCCAGAAATTAAAAG  840

seq1  CAAAAGAATTC  852
      |||||||||||
seq2  CAAAAGAATTC  851