BAC Information

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BAC

Clone NameB6Ng01-108E02
Chromosome10 (Build37)
Map Location 47,080,279 - 47,081,353
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041632, LOC668252
Downstream geneLOC100042387, LOC100041663, LOC100042398
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108E02.bB6Ng01-108E02.g
ACCDH915487DH915488
length1,2411,065
definitionDH915487|Mus musculus domesticus DNA, BAC clone: B6Ng01-108E02, 5' end.DH915488|Mus musculus domesticus DNA, BAC clone: B6Ng01-108E02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctcatgtctcctggtccctggctcctgtcaaagttaccgcccc
cattgcccctacagaagaagcatgcctagcagtcacgtaggcaatgtccc
aagcttctgactttcaggctagactccttcccagttacctaacaacagaa
aagatagcagcatactttaagagggactgtttgacccctcctcgctctct
cattcatcttgatcttattcaccttactccccttactctcctctctaacc
tctctctcaccctcttactctagcctttcttctttctctccttttcccct
ttctctcctcttggccattgccagtctttctctctctttctaccttctct
cttcccccctgactttctacaacaaagttctaaaaccatagactgtttct
gttcatcaaagcccgctgtgcttggtcaatggaataggctttcttctaat
gagctgtttctaatctcctgatggaaggccttcctgtgctccagtcaagg
ccagctgcacttactcttgcctatgtgggaacttctctccctaagccctc
tctcccataaccctggggctacagagtatcaccctggggccctggttgga
ggcttctccttgtccacccctgtagagtgggttcagtgtcttagatgccc
acccggggctgagtggaacgcgtccagcagccctcccatgtctgcctgcc
cagagcatatgaggaactctgaccacatgtgggctattctcccttccccc
ctctatcccctaccccttctagtttacacatcttcttagaactttgtctc
tttaactccttccatatgtattttgttcccccttctaagaaggaacaaag
tatccacactttggtcttccttctcgagtttcatgtgtttacaaattgta
tctttgatataattccttcactgtgtgattgtgttttcctgtaattcttt
aaggattgtttttattattctttaaggcttcaacctatttacagttttct
cttgtatttatttaaaggagtataatgacttcttattcatctaccaccat
catgagatgatttaaatctggtctgcttttctggtgtgtggtactagaac
aacttggggtgggaatactgggttgtgatatgcaggattgtcttgaataa
gaatctgattgtcttgcatcggaatcggtgaatatgcaattcgcggaaca
tctctgtggcggaaccgtggacacactctgtagaacactct
gaattcatgatttgccaagtacttgagggtcagtatcaaggaatgagttt
ttttttttaaataatcatttttattacagtttacacacacacatacacac
acacacacacacacacacacacacacacacacacacacacacaacttctg
ctttctcatccctcacacttgcacaaggccctttctttcagtaactttca
cttttgatgttcattttttgtgcaactcagagttccattagagttctctg
tctgagcactgttgggagaggcagtcatgttgctggaggagtcaagaatt
ttatgacttgatcccaaggcagacaactgtcccactgggcatggcttgag
catagatgagacatcaaactgcctccacagtgatatacctcctccaccaa
agcctcacctttgaataatgccactctctatgaccaagcattcaaatgca
tgagtctatgaaagccattcctatccaaccaccacattccactctcttgc
ccccattgtattgtagatatattggagaaatggattcagtttgatgtcaa
atgtcgccataatctataacagtctcaaacttatttaacttccaaagttc
aaagtctcttttgggaaacatataatctcttaactgtaacatcctataca
atcaaaattaaaaatcagaatacagataattccaacctataatgacacag
aatatacattcctttttcaaaatgaaggtaaggaatgatagtaagaaaat
actggatgaaaagaagacctttttagtagaaattactatatatttggaca
gtctcttactacttttctgctttctccagtctgtccttgtcatttttaaa
ctttaatgacatcaactttcttagctttgggataaatatgaaaccatatg
gtacttgttagagactgacataatctttaaagggcatttccagtctatcc
ctatgttccatgtcaatttcattaaatgactggattgccttatgatgagc
ctacgtaccttctagattggtatttgtgtccccattcctgctgtctggat
agggctcatgtagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_47080279_47081353
seq2: B6Ng01-108E02.g_67_1131

seq1  GAATTCATGATTTGCCAAGTACTTGAGGGTCAGTATCAAGGAATGAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGATTTGCCAAGTACTTGAGGGTCAGTATCAAGGAATGAGTTT  50

seq1  TTTTTTTTAAATAATCATTTTTATTACAGTTTACACACACACATACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAAATAATCATTTTTATTACAGTTTACACACACACATACACAC  100

seq1  ACACACACACACACACACACACACACACACACACACACACACAACTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACAACTTCTG  150

seq1  CTTTCTCATCCCTCACACTTGCACAAGGCCCTTTCTTTCAGTAACTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCATCCCTCACACTTGCACAAGGCCCTTTCTTTCAGTAACTTTCA  200

seq1  CTTTTGATGTTCATTTTTTGTGCAACTCAGAGTTCCATTAGAGTTCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATGTTCATTTTTTGTGCAACTCAGAGTTCCATTAGAGTTCTCTG  250

seq1  TCTGAGCACTGTTGGGAGAGGCAGTCATGTTGCTGGAGGAGTCAAGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCACTGTTGGGAGAGGCAGTCATGTTGCTGGAGGAGTCAAGAATT  300

seq1  TTATGACTTGATCCCAAGGCAGACAACTGTCCCACTGGGCATGGCTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACTTGATCCCAAGGCAGACAACTGTCCCACTGGGCATGGCTTGAG  350

seq1  CATAGATGAGACATCAAACTGCCTCCACAGTGATATACCTCCTCCACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATGAGACATCAAACTGCCTCCACAGTGATATACCTCCTCCACCAA  400

seq1  AGCCTCACCTTTGAATAATGCCACTCTCTATGACCAAGCATTCAAATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCACCTTTGAATAATGCCACTCTCTATGACCAAGCATTCAAATGCA  450

seq1  TGAGTCTATGAAAGCCATTCCTATCCAACCACCACATTCCACTCTCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTATGAAAGCCATTCCTATCCAACCACCACATTCCACTCTCTTGC  500

seq1  CCCCATTGTATTGTAGATATATTGGAGAAATGGATTCAGTTTGATGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTGTATTGTAGATATATTGGAGAAATGGATTCAGTTTGATGTCAA  550

seq1  ATGTCGCCATAATCTATAACAGTCTCAAACTTATTTAACTTCCAAAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCGCCATAATCTATAACAGTCTCAAACTTATTTAACTTCCAAAGTTC  600

seq1  AAAGTCTCTTTTGGGAAACATATAATCTCTTAACTGTAACATCCTATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTCTTTTGGGAAACATATAATCTCTTAACTGTAACATCCTATACA  650

seq1  ATCAAAATTAAAAATCAGAATACAGATAATTCCAACCTATAATGACACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATTAAAAATCAGAATACAGATAATTCCAACCTATAATGACACAG  700

seq1  AATATACATTCCTTTTTCAAAATGAAGGTAAGGAATGATAGTAAGAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACATTCCTTTTTCAAAATGAAGGTAAGGAATGATAGTAAGAAAAT  750

seq1  ACTGGATGAAAAGAAGACCTTTTTAGTAGAAATTACTATATA-TTGGACA  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTGGATGAAAAGAAGACCTTTTTAGTAGAAATTACTATATATTTGGACA  800

seq1  GTCTCTTACTACTTTTCTGCTTTCTCCAGTCTGTCCTTGTCATTTTTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTACTACTTTTCTGCTTTCTCCAGTCTGTCCTTGTCATTTTTAAA  850

seq1  CTTTAATGACATCAACTTTCTTAGCTTTGGGATAAATATGAAACCATATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATGACATCAACTTTCTTAGCTTTGGGATAAATATGAAACCATATG  900

seq1  GTACTTGTTAGAGACTGACATAATCTTTAAAGGGCAATTTCCAGTTCTAT  949
      ||||||||||||||||||||||||||||||||||| |||||||| |||||
seq2  GTACTTGTTAGAGACTGACATAATCTTTAAAGGGC-ATTTCCAG-TCTAT  948

seq1  CCCTATTGTTCCAATGTCAATTTCATTAAATGACTGGATTGCCTTATGAT  999
      ||||| |||||| |||||||||||||||||||||||||||||||||||||
seq2  CCCTA-TGTTCC-ATGTCAATTTCATTAAATGACTGGATTGCCTTATGAT  996

seq1  GAGCCTACGTAACCTCCTAGATTGGTATTTTGTGTCCCCCCATTTCTTGC  1049
      |||||||||| |||| ||||||||||| |||||||||||    ||| |||
seq2  GAGCCTACGT-ACCTTCTAGATTGGTA-TTTGTGTCCCC---ATTCCTGC  1041

seq1  TGTCTTGATAGGGCTTCATTGTAGAT  1075
      ||||| |||||||| ||| |||||||
seq2  TGTCTGGATAGGGC-TCA-TGTAGAT  1065