BAC Information

Click to search

BAC

Clone NameB6Ng01-108P14
Chromosome10 (Build37)
Map Location 16,372,641 - 16,373,856
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439, LOC382457
Downstream geneLOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108P14.bB6Ng01-108P14.g
ACCDH916015DH916016
length1,1941,084
definitionDH916015|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P14, 5' end.DH916016|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcagcactgtacagatagaaccatttaagtatacacattggca
caacatttgaaaatctagcatttctatatcaacagactgaataaagtaaa
actatgatcacactaactgatacaaaaatgcctttgacaatacccagtgc
acatttactatgaaaaatcattagcacaccaggtgtagtgaagacatctt
taaatagggcaagaaaaagaatttaaaaaacctataacaatcactgatcc
cacccttgacactcagtaatgaagcaaaaaccttgccagttccctgatca
catccaattgaattgtcaagctcaagagaggtactaccataccacaagga
gaaatgataaaatcaagctaaatagacctctaatcccagcacttcaaagg
tggaaacagaagagtcatgatttcaacataaatctccagttcacagcatg
tttcagggaagtctggactctataaagcctgtctctaacaaaataaaatg
tttaaaatgtgtgaagatgaaaatatttaaagaatttaaaggggttgttt
gtggcaacatgcgacggtaaccactgaactctggaggctgtgctggaata
attagaagttttcctgaaactccagacatatagagaattattggactcct
gagctatgtaaaatgcatgggcacaggagagcaaccatattctcaggggt
acgactcatgttgatgtggacaattctaactcaaaccattggatcacaaa
aacaaaaaggaaaaaagataaacaaaaaaaccaaggaagtagaagtgaaa
tttaggaagaagagatttgccagcagaggatgttagataagagataatat
agagatcttgggtctcggatcctcagagactagtctgcacagaaaagagt
acagatacagaagctacacaacttctgggacaggtagaagaaacacagct
tctgggacagaccctgttccaggccttcatctcagccaggaggcaggtcc
tacaccagatatctgtgcactttcctgcaggagagagcttgctgcagaca
gtactctggaccactgaacctcagagagagctagactgtcagtgctgata
gaggaccgaatccaagggagattagcctccactgaggacaccataacatg
gacttggaaatcccgaatggccaaggcaagtagatcttactaac
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgtttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttgggtgatttcacccctgagtttgatat
ttccttgccgtctactcctcttgggtgaatttgctttccttttttctaga
gcttttagatgtgttgtcagctgctagtatgtgctctctccgtttttctt
gaaggcactcatagctatgagttttcctctagaaatgctttcatgtgtcc
caaagttggtacgttggtgcttcatttcataacctctaaaagttttattt
cttttcttattcttcttgaccaagatacatgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16372641_16373856
seq2: B6Ng01-108P14.b_45_1238

seq1  GAATTCTGCAGCACTGTACAGATAGAACCATTTAAGTATACACATTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAGCACTGTACAGATAGAACCATTTAAGTATACACATTGGCA  50

seq1  CAACATTTGAAAATCTAGCATTTCTATATCAACAGACTGAATAAAGTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTGAAAATCTAGCATTTCTATATCAACAGACTGAATAAAGTAAA  100

seq1  ACTATGATCACACTAACTGATACAAAAATGCCTTTGACAATACCCAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGATCACACTAACTGATACAAAAATGCCTTTGACAATACCCAGTGC  150

seq1  ACATTTACTATGAAAAATCATTAGCACACCAGGTGTAGTGAAGACATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACTATGAAAAATCATTAGCACACCAGGTGTAGTGAAGACATCTT  200

seq1  TAAATAGGGCAAGAAAAAGAATTTAAAAAACCTATAACAATCACTGATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGGGCAAGAAAAAGAATTTAAAAAACCTATAACAATCACTGATCC  250

seq1  CACCCTTGACACTCAGTAATGAAGCAAAAACCTTGCCAGTTCCCTGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTGACACTCAGTAATGAAGCAAAAACCTTGCCAGTTCCCTGATCA  300

seq1  CATCCAATTGAATTGTCAAGCTCAAGAGAGGTACTACCATACCACAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAATTGAATTGTCAAGCTCAAGAGAGGTACTACCATACCACAAGGA  350

seq1  GAAATGATAAAATCAAGCTAAATAGACCTCTAATCCCAGCACTTCAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGATAAAATCAAGCTAAATAGACCTCTAATCCCAGCACTTCAAAGG  400

seq1  TGGAAACAGAAGAGTCATGATTTCAACATAAATCTCCAGTTCACAGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACAGAAGAGTCATGATTTCAACATAAATCTCCAGTTCACAGCATG  450

seq1  TTTCAGGGAAGTCTGGACTCTATAAAGCCTGTCTCTAACAAAATAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGGAAGTCTGGACTCTATAAAGCCTGTCTCTAACAAAATAAAATG  500

seq1  TTTAAAATGTGTGAAGATGAAAATATTTAAAGAATTTAAAGGGGTTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATGTGTGAAGATGAAAATATTTAAAGAATTTAAAGGGGTTGTTT  550

seq1  GTGGCAACATGCGACGGTAACCACTGAACTCTGGAGGCTGTGCTGGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAACATGCGACGGTAACCACTGAACTCTGGAGGCTGTGCTGGAATA  600

seq1  ATTAGAAGTTTTCCTGAAACTCCAGACATATAGAGAATTATTGGACTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAGTTTTCCTGAAACTCCAGACATATAGAGAATTATTGGACTCCT  650

seq1  GAGCTATGTAAAATGCATGGGCACAGGAGAGCAACCATATTCTCAGGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATGTAAAATGCATGGGCACAGGAGAGCAACCATATTCTCAGGGGT  700

seq1  ACGACTCATGTTGATGTGGACAATTCTAACTCAAACCATTGGATCACAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTCATGTTGATGTGGACAATTCTAACTCAAACCATTGGATCACAAA  750

seq1  AACAAAAAGGAAAAAAGATAAACAAAAAAACCAAGGAAGTAGAAGTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAGGAAAAAAGATAAACAAAAAAACCAAGGAAGTAGAAGTGAAA  800

seq1  TTTAGGAAGAAGAGATTTGCCAGCAGAGGATGTTAGATAAGAGATAATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAAGAAGAGATTTGCCAGCAGAGGATGTTAGATAAGAGATAATAT  850

seq1  AGAGATCTTGGGTCCCGGATCCCTCAGAGACTAGTCTGCACAGAAAAGAG  900
      |||||||||||||| ||||| |||||||||||||||||||||||||||||
seq2  AGAGATCTTGGGTCTCGGAT-CCTCAGAGACTAGTCTGCACAGAAAAGAG  899

seq1  TACAGAATACAGAAGCTACACAACTTCTGGGACAGGTAGAAGAAACACAG  950
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAG-ATACAGAAGCTACACAACTTCTGGGACAGGTAGAAGAAACACAG  948

seq1  CTTCTGGGACAGACCCTGTTCCAGGCCTTCATCTTCAGCCAGGAGGCAGG  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTCTGGGACAGACCCTGTTCCAGGCCTTCATC-TCAGCCAGGAGGCAGG  997

seq1  TCCTAACACCAGATATCTGTGCACCTTCCCTGCAAGAGGAGAGCTTGCCT  1050
      |||| |||||||||||||||||| ||| |||||| || ||||||||| ||
seq2  TCCT-ACACCAGATATCTGTGCA-CTTTCCTGCAGGA-GAGAGCTTG-CT  1043

seq1  GCAGACAGTACTCT-GACCACTGAAACTCAGGAGAGAGCTAGACTGCCAG  1099
      |||||||||||||| |||||||||| |||| ||||||||||||||| |||
seq2  GCAGACAGTACTCTGGACCACTGAACCTCA-GAGAGAGCTAGACTGTCAG  1092

seq1  GTTTGCTGATAGAGGGAACAGAATCACAGGAGGAATAAGCTCCAACCAGA  1149
         ||||||||||||  || |||||  |||  || ||  |||||  | ||
seq2  ---TGCTGATAGAGG--ACCGAATCCAAGGGAGATTAGCCTCCA--CTGA  1135

seq1  GACAACTATAACAATGAACTCCAGAGATTACCAGATGGCAAAAGGCAAAT  1199
      |   || ||||| ||| |||   |  | | ||  |||||  |||||||  
seq2  GGACACCATAAC-ATGGACT--TGGAAATCCCGAATGGC-CAAGGCAA--  1179

seq1  GTAAGAATCTTACTAAC  1216
      |||   |||||||||||
seq2  GTA--GATCTTACTAAC  1194