BAC Information

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BAC

Clone NameB6Ng01-109G12
Chromosome10 (Build37)
Map Location 54,560,990 - 54,562,063
singlet/doubletsinglet
Overlap genenone
Upstream geneMan1a, LOC100041898
Downstream geneLOC382460, LOC100041927
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109G12.bB6Ng01-109G12.g
ACCDH916324DH916325
length1,2391,070
definitionDH916324|Mus musculus domesticus DNA, BAC clone: B6Ng01-109G12, 5' end.DH916325|Mus musculus domesticus DNA, BAC clone: B6Ng01-109G12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaccactagatgacttgcctagctacaaaacatggccagtgtac
actctcaattctctattactaagaatcctcatgagggtcactctcataga
ctccaggaagtgtccattgcactagatttcacattcccttcaaatgaccc
ccaattccaggtctttttctgcactttctttgcactccctctttatctga
tcgttcctactcccatccctaaccacccccaatatttttgcataaccttt
tctatgtccccttcacagggagatccatacttcctccctatacacatctt
tctcacctaacttctctaagtctgtggattgtcgcttgattgtcatttgc
ttgacatctaatatccacgtataaatgagtacataccatgtttgtctttc
taggtctgggttacctaactcagaatgagtttttttttttttatttctag
tttcacccatttgcctgaaattttaatgatgtcacttttttaaaaatcac
agattagcactcaattttgtaaatgtaccactttttttattcattcttca
gctgagggacatataagctgtatcaagtttatagctattatgaataaagc
ttcaatgaacagtgagttgaacaatcattcttgtggtatggaggaatatc
cattggatatatgcccaagtgttgtattcctaggttttgaggtagatcaa
ttcctagttgtctgatgaaccaccatattgatttccatagtgattgtaca
agttggcactctaaccagcaatggagatgggttcccttgttccgcatcct
tgccagcatgaactatcacttgttcttgatcttatactttctctcgggta
taataagacagaatctcagagtagttttaatctgtgtttccctgatggct
aagatgctgtaagtttctttaagtgttttcagctatttgagatttctcta
ttgattatttgttatttcagttccccagttaataggtattgcttttatat
ccaggctttttcttagttcttgttgtactttataaatttgataggttgtt
tgatctccgatgctgtggataaaatggccatttctaagtatctgcattgt
ggagccatgggagatcttgccatggcttcaatctttctcctagctgaagt
ttgcccaacggaacctttatcgtggaattatggatggaaatccggatttt
ggcacacaaggatttttcgaccataggcctgcctataca
gaattcagggaatgtcctattatctgtttgtaaacacaaagttttctttt
gattgtaagaaaatgaattattcttggttcattttaaaagttgcagccac
aagagtcttcttctctgctgtttcttgaagtcagtgtgatcttcactgta
tgtgactcttacttaatcccaattatttggtgttcaactcctcatatcac
tgtagaatgacgttggattgtacattctgctctgtctctaattgttcaga
tacgggcttttattactaatggcaaatataggcagtattaagcagtctac
cccatgaccatgctttgtaggtttatgttggtacaaggaagaaaaataac
tccacactaacaaattccaaagtgttatgttataaatgaagcaactagaa
ttgatttcccaagacaaggttattgaattttaaataaggggaaggttaat
agatcaattaattactttgtatgactctaagctggatttctcacattcaa
cacagtgactcatgttatgtgtgagatgtagcttcttttgttaaaggaaa
cttctgtgtcctaatgccttctgtgactcagggaacatttgagatcccat
ctggcacctcaaattgtgtttcagtggcacaacaaaatgattatgaaaga
tcttgtctttgaaagtcattgcaaaaattgtgactagtggtcacagaagg
gaaaagatatatttaaagcatcgcaaatcgaggtttcacagtgttcaaac
taaatctgcagacagtaagatccttggtgcactatcaaacttgaatatgt
gaatataaaataccaaagaataaaaatacccacttctgttaacagaacag
aattgttgtgttattttccccattgcctttgtcttctttgcttcacaatg
gtactggcttattgttgacccagccttagaaaaatgagcagagaaaatac
gagagaacatgtgatattgctttttcttccagacacttgtatcagactat
gcagaaaagcattctttcttggtttactatgtttttagcaccacactcta
tgtaggtgcacgagacccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_54560990_54562063
seq2: B6Ng01-109G12.g_68_1137

seq1  GAATTCAGGGAATGTCCTATTATCTGTTTGTAAACACAAAGTTTTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGAATGTCCTATTATCTGTTTGTAAACACAAAGTTTTCTTTT  50

seq1  GATTGTAAGAAAATGAATTATTCTTGGTTCATTTTAAAAGTTGCAGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTAAGAAAATGAATTATTCTTGGTTCATTTTAAAAGTTGCAGCCAC  100

seq1  AAGAGTCTTCTTCTCTGCTGTTTCTTGAAGTCAGTGTGATCTTCACTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTTCTTCTCTGCTGTTTCTTGAAGTCAGTGTGATCTTCACTGTA  150

seq1  TGTGACTCTTACTTAATCCCAATTATTTGGTGTTCAACTCCTCATATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTCTTACTTAATCCCAATTATTTGGTGTTCAACTCCTCATATCAC  200

seq1  TGTAGAATGACGTTGGATTGTACATTCTGCTCTGTCTCTAATTGTTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAATGACGTTGGATTGTACATTCTGCTCTGTCTCTAATTGTTCAGA  250

seq1  TACGGGCTTTTATTACTAATGGCAAATATAGGCAGTATTAAGCAGTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGCTTTTATTACTAATGGCAAATATAGGCAGTATTAAGCAGTCTAC  300

seq1  CCCATGACCATGCTTTGTAGGTTTATGTTGGTACAAGGAAGAAAAATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGACCATGCTTTGTAGGTTTATGTTGGTACAAGGAAGAAAAATAAC  350

seq1  TCCACACTAACAAATTCCAAAGTGTTATGTTATAAATGAAGCAACTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTAACAAATTCCAAAGTGTTATGTTATAAATGAAGCAACTAGAA  400

seq1  TTGATTTCCCAAGACAAGGTTATTGAATTTTAAATAAGGGGAAGGTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCCCAAGACAAGGTTATTGAATTTTAAATAAGGGGAAGGTTAAT  450

seq1  AGATCAATTAATTACTTTGTATGACTCTAAGCTGGATTTCTCACATTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAATTAATTACTTTGTATGACTCTAAGCTGGATTTCTCACATTCAA  500

seq1  CACAGTGACTCATGTTATGTGTGAGATGTAGCTTCTTTTGTTAAAGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGACTCATGTTATGTGTGAGATGTAGCTTCTTTTGTTAAAGGAAA  550

seq1  CTTCTGTGTCCTAATGCCTTCTGTGACTCAGGGAACATTTGAGATCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGTCCTAATGCCTTCTGTGACTCAGGGAACATTTGAGATCCCAT  600

seq1  CTGGCACCTCAAATTGTGTTTCAGTGGCACAACAAAATGATTATGAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACCTCAAATTGTGTTTCAGTGGCACAACAAAATGATTATGAAAGA  650

seq1  TCTTGTCTTTGAAAGTCATTGCAAAAATTGTGACTAGTGGTCACAGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTTTGAAAGTCATTGCAAAAATTGTGACTAGTGGTCACAGAAGG  700

seq1  GAAAAGATATATTTAAAGCATCGCAAATCGAGGTTTCACAGTGTTCAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATATATTTAAAGCATCGCAAATCGAGGTTTCACAGTGTTCAAAC  750

seq1  TAAATCTGCAGACAGTAAGATCCTTGGTGCACTATCAAACTTGAATATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTGCAGACAGTAAGATCCTTGGTGCACTATCAAACTTGAATATGT  800

seq1  GAATATAAAATACCAAAGAATAAAAATACCCACTTCTGTTAACAGAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAAAATACCAAAGAATAAAAATACCCACTTCTGTTAACAGAACAG  850

seq1  AATTGTTGTGTTATTTTCCCCATTGCCTTTGTCTTCTTTGCTTCACAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTGTGTTATTTTCCCCATTGCCTTTGTCTTCTTTGCTTCACAATG  900

seq1  GTACTGGCTTATTGTTGACCCAGCCTTAGAAAAAATGAGCAGAGAAAAAT  950
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  GTACTGGCTTATTGTTGACCCAGCCTTAG-AAAAATGAGCAGAG-AAAAT  948

seq1  ACGAGAGAACATGTGAATATTGCTTTTTCTTCCAGAACAC-TGTATCAGA  999
      ||||||||||||||| ||||||||||||||||||| |||| |||||||||
seq2  ACGAGAGAACATGTG-ATATTGCTTTTTCTTCCAG-ACACTTGTATCAGA  996

seq1  CTATGCAGAAAAGGCATTCTTTCTTGGTTTACTATGTTTTAAGCACCACA  1049
      |||||||||||| ||||||||||||||||||||||||||| |||||||||
seq2  CTATGCAGAAAA-GCATTCTTTCTTGGTTTACTATGTTTTTAGCACCACA  1045

seq1  -TCTATGTAGGTGCACAGAGACCCAA  1074
       ||||||||||||||| |||||||||
seq2  CTCTATGTAGGTGCAC-GAGACCCAA  1070