BAC Information

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BAC

Clone NameB6Ng01-109J14
Chromosome10 (Build37)
Map Location 29,636,715 - 29,637,635
singlet/doubletsinglet
Overlap genenone
Upstream gene4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064
Downstream geneLOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109J14.bB6Ng01-109J14.g
ACCDH916467DH916468
length1,154912
definitionDH916467|Mus musculus domesticus DNA, BAC clone: B6Ng01-109J14, 5' end.DH916468|Mus musculus domesticus DNA, BAC clone: B6Ng01-109J14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaaaccgaatggcgaagaagcacctgaaaaaatgt
tcggagaccttaatcatcctggaaatgcaaatcaaaacaaccctgaaatt
ccacctcacaccagtgagaatggctaagatcaaaaattgtggtgacctcc
tatgctggcgaagatgtggagaaagaggaactctcctacgttggaggtgg
gattgcaggattgtacaacccctctggaaatcaccttggcggttcctcag
aaaattggacatatggctaccggaggatccggtggatcctctcctgggca
tatatccagaagaagccccaactggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaaactggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaag
gaactcacacaatatgtactcactgataagtggatactagcccaaaacct
aggatacccacgatataagatacaatttcctaaacacatgaaactcaaga
aaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaac
aaaacacccatggaaggagttacagaaacaaagtatggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcttccaaatgctgacaccattgcatacactagcaagattttactgaaag
gacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccat
ggaggagctagagaagtacccaggagctaatgggatcttcaccctatagg
tggaacaacattatgaactaacagtaccctgagctcctgattctagctgc
tatggtatcaaagatgcctagtcgcatcactggaaagaagccattggacc
ccaatttgtgtgcccgtacagggaccccagtccaagggggggaaggggtg
tgta
gaattctatgttctagaatgttcccttctttcctacaaatattttatttc
agtgcttgcccatgtttattaaccttttgtctttttttcctgtcttttac
tactaggtcctaaattcaaaaatggaacaattctggctaattttagaaaa
aataatttgaagacttccaagaaggcttacgggtaaacactagtttcctg
atctgatatccaaatccatgtaccatggaatttgcatacctctgatacac
ataaatacacacagagagagagagatttcatatatacatgcatgcatagc
atatatcatacatacacccattcacacacgtaagtaaatattttaaagaa
agttctaaacagatgggaattagtataagtgcaaattcatattatacatt
gaaattccctctaacgaccctcagagaacatgtttagtatagtccactat
ttaattatgcattttttcattaaaaatgaaaatgatcagagttagatgaa
cagaataatgaagccccaggatgaggtggcacccaaggggagagggcaat
agaggaaggatctgtaaggatgagaataggaagagaggagggaggggcta
tgatcgggatgtaaagcgaataaactactactttaatcaaagcatagttt
tcatcaactgatatactttgtcaatgtagttatgatacaaattacacgac
tctctagactgatacactgaaattgttgttctagcaagaacactattgaa
ctctatgagagcatgcttgctttttactgatgaaactctacttcctgtga
atggacatatatcagtgacatgtcttacttgggtaacgactctaccagtg
ctctttgctagatgtcaagtagatggttaaaatgacacatgaaaagattg
gaacacgggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29636715_29637635
seq2: B6Ng01-109J14.g_67_978 (reverse)

seq1  TAACCCGTGTTTCCAAACTTTTCATTGTGTCATTTTTAGCCATCTACTAA  50
      ||||||||| |||||| ||||||| ||||||| ||||| |||||||||  
seq2  TAACCCGTG-TTCCAATCTTTTCA-TGTGTCA-TTTTAACCATCTACT-T  46

seq1  GTCATGATAGCAAATAATATTTGGTAGTAGAGTTTCCCCTGTATGACTTT  100
      | |||  ||||||| |  |  ||||||    ||| |||  ||| ||| | 
seq2  GACAT-CTAGCAAAGAGCA-CTGGTAGAGTCGTTACCCAAGTAAGACATG  94

seq1  TCCTTTATATTTCACCATTTTCAGGAA-TTGAGTTTCTTCAGTTTTAAAA  149
      ||  | |||| |  |||||  |||||| | ||||||| ||||  | ||||
seq2  TCACTGATATATGTCCATTCACAGGAAGTAGAGTTTCATCAG--TAAAAA  142

seq1  CTAATCATGCTCTCAAAGAATTCAATTGGAATTTTTGTTATAACTAC-AT  198
        || |||||||||| ||| ||||| | |  || ||| || ||| || ||
seq2  GCAAGCATGCTCTCATAGAGTTCAA-TAGTGTTCTTGCTAGAACAACAAT  191

seq1  TTATATGTATCAGTCTAGAGAAAACTGATATTTTTATTATAACTACATTG  248
      ||   ||||||||||||||||    ||  |||| ||| ||||||||||||
seq2  TTCAGTGTATCAGTCTAGAGAGTCGTGTAATTTGTATCATAACTACATTG  241

seq1  ACATTATGTATCAGTTTGAAGAAAACTAATACTTTTATTAATGTACTTAT  298
      |||   | |||||| |||| ||||||| || |||| ||||| ||| |  |
seq2  ACAAAGTATATCAG-TTGATGAAAACT-ATGCTTTGATTAAAGTAGTAGT  289

seq1  TTATTCACTTTACATCCAGATCATAGCCCCTCCCTCCTTTCTTCCTATTC  348
      |||||| |||||||||| |||||||||||||||||||| |||||||||||
seq2  TTATTCGCTTTACATCCCGATCATAGCCCCTCCCTCCTCTCTTCCTATTC  339

seq1  TCATCCTTACAGATCCTTCCTCTATTGCCCTCTCCCCTTGGGTGCCACCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTACAGATCCTTCCTCTATTGCCCTCTCCCCTTGGGTGCCACCT  389

seq1  CATCCTGGGGCTTTATTATTCTGTTCATCTAACTCTGATCATTTTCATTT  448
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CATCCTGGGGCTTCATTATTCTGTTCATCTAACTCTGATCATTTTCATTT  439

seq1  TTAATGAAAAAATGCATAATTAAATAGTTGACTATACTAAACATGTTCTC  498
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTAATGAAAAAATGCATAATTAAATAGTGGACTATACTAAACATGTTCTC  489

seq1  TGAGGGTCGTTAGAGGGAATTTCAATGTATAATATGAATTTGCACTTATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTCGTTAGAGGGAATTTCAATGTATAATATGAATTTGCACTTATA  539

seq1  CTAATTCCCATCTGTTTAGAACTTTCTTTAAAATATTTACTTATGTGTGT  598
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTAATTCCCATCTGTTTAGAACTTTCTTTAAAATATTTACTTACGTGTGT  589

seq1  GAATGTGTGTATGTATGATATATGCTATGCATGCATGTATATATGAAATC  648
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGTGTATGTATGATATATGCTATGCATGCATGTATATATGAAATC  639

seq1  TCTCTCTCTCTGTGTGTATTTATGTGTATCAGAGGTATGCAAATTCCATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTGTGTGTATTTATGTGTATCAGAGGTATGCAAATTCCATG  689

seq1  GTACATGGATTTGGATATCAGATCAGGAAACTTGTGTTTACCCCTAAGCC  748
      |||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  GTACATGGATTTGGATATCAGATCAGGAAACTAGTGTTTACCCGTAAGCC  739

seq1  TTCTTGGAAGTCTTCAAATTATTCTTTCTAAAATTAGCCAGAATTGTTCC  798
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTCTTGGAAGTCTTCAAATTATTTTTTCTAAAATTAGCCAGAATTGTTCC  789

seq1  ATTTTTGAATTTAGGACCTAGTAGTAAAAGACAGGAAAAAAAGACAAAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAATTTAGGACCTAGTAGTAAAAGACAGGAAAAAAAGACAAAAG  839

seq1  GTTAATAAACATGGGCAAGCACTGAAATAAAATATTTGTAGGAATGAATG  898
      |||||||||||||||||||||||||||||||||||||||||||| ||| |
seq2  GTTAATAAACATGGGCAAGCACTGAAATAAAATATTTGTAGGAAAGAAGG  889

seq1  GAACATTCTAGAACATAGAATTC  921
      |||||||||||||||||||||||
seq2  GAACATTCTAGAACATAGAATTC  912