BAC Information

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BAC

Clone NameB6Ng01-109O04
Chromosome10 (Build37)
Map Location 129,417,864 - 129,611,538
singlet/doubletdoublet
Overlap geneLOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825
Upstream geneOlfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247
Downstream geneOlfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109O04.bB6Ng01-109O04.g
ACCDH916669DH916670
length1,135938
definitionDH916669|Mus musculus domesticus DNA, BAC clone: B6Ng01-109O04, 5' end.DH916670|Mus musculus domesticus DNA, BAC clone: B6Ng01-109O04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,610,407 - 129,611,538)(129,417,864 - 129,418,661)
sequence
gaattctaaacttacattgctaagcttgcactgagatttctaactctatg
tagtagatagtaaagcctgatttctttcactgtctctcttacaatactag
aggcaattctgaatgtcactgaataggcaacattcttactgaattccaag
cccagggttgtctcaatgtctactagggcattggtgaaggccaggaagca
aagtttgattttgcttaggtatttggcaagtcattgcttggaggcaccta
taacaaaacaatactgaaagaaagcacacagatccatttgcaaggacaaa
attggagcatacattctatggaatgccacagttccaggagactaagtttc
catgaaactcttcgcctcaggactgcatccaggcttttggcctgtcacgc
atgtcactactgatgtattggaaacaagggcatttgagtgtatcaaaacc
atacttaaaaaaccaggtccaaaaacccatcaaacataccagactaacaa
caaaaggtataactaactactctcttctggattcctataaatgacagcta
atcctgagatggtgaaagctctacccacttttccccatctgaccatccca
gagaattcatgactgctctggggacttaagattagtctggtccctactgc
ttggcacataacacttgaattattgtctattaacccatagtcaattccag
tatctataaattcagtcatgttgtccttcctctctaaggctcttctggac
cccacaattcagctgtgtatgcctctagcagctctctgtatgagcttatt
aatatgttatctaatcatttgcagtgactctctctgcatgagctctacac
ctctgcctccagtagatcactttgaattttaatacctcctaaacattttc
cttaaatttcatttatgtatattttttgtgtctgtgtaggtatatgctac
ttgtgtgtgggtgcccatggagaccagagaggatatcagatcccctggac
ctggagtgtagatagatgtgggtacctgaccatggatggtgggaactgaa
ctcaggtctctctgcaagagcagcaagtgaccctcttttttttccttttc
catgtttggtatgcatatataataagaagtatgta
gaattcagcaggcatccaaatggtagcaattgtttttcagggagatgttt
atgttcaagttctctatttagtgtagttatatggtccatgcattaaataa
ttttctttgtattacccacagtgtcataagaaataaatcaatcctaatct
taaggacttttcatgtcctcattttctatattggatcttgaagtgataat
gaagattctcatgagaattcgagattcataaccacattttcccaggagtc
agaaatgttcaagttatccaatgttctttccagacaatctgtatttttaa
aaacagattctcaatagaggaatctcaaatggatgagaaagaattgctta
aataaatgatcaacattattagtcaccagggaaatgcaaatcaaaatgtc
tgtgagatttcattttatacttgtcagaatggctacaatccataaaacag
gtgacagctcatggtggtgaagatgtgaaagatgaggaacactcctccag
tgcagttgggagtgcaaacttctacagtcactgtggaaatcagtgtagca
gatcatcagaaaatgaggaattggtttgatctatctcaagatccagctat
aacattttggagtatatacccaaaggttgttctgccctactacaaggaca
ctttgtctactgtgctcattccagcattattcacaatagccagaaactag
aaacaacctaggtgttcatcaattgaaggatgaataataaaatgtggtag
atttgcacaatggtgtattactcaagtgttaaaaatgacatcatgaaatt
acaggcaattcaagcaagtagaaaaataaatcatcctgaatgaggtaaca
cagacccaaaaagaaaatatggtatgtattcacatatacctggataatag
ctgttaagtacttgatagtcttactataatccctagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129610407_129611538
seq2: B6Ng01-109O04.b_47_1181 (reverse)

seq1  TACATACTTACTTA-TATATATGCATA-CAAACATGGAAAAG--AAAAAA  46
      ||||||||| |||| |||||||||||| ||||||||||||||  ||||||
seq2  TACATACTT-CTTATTATATATGCATACCAAACATGGAAAAGGAAAAAAA  49

seq1  AGA-GGTCACTTGCTGCTCTTGCAGAG-GACCTGAGTTCAGTTCCCACCA  94
      ||| ||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAGGGTCACTTGCTGCTCTTGCAGAGAGACCTGAGTTCAGTTCCCACCA  99

seq1  TCCAT-GTCAGGTACCCACATCTATCTACAACTCCAGGTCCAGGGGATCT  143
      ||||| ||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCATGGTCAGGTACCCACATCTATCTAC-ACTCCAGGTCCAGGGGATCT  148

seq1  GATATCCTCTTCTGGTCTCCATGGGCACCCACACACAAGTAGCATATACC  193
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCTC-TCTGGTCTCCATGGGCACCCACACACAAGTAGCATATACC  197

seq1  TACACAGACACAAAAAATATACATAAATGAAATTTAAGGAAAATGTTTTA  243
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TACACAGACACAAAAAATATACATAAATGAAATTTAAGGAAAATG-TTTA  246

seq1  GGAGGTATTAAAATTCAAAGTGATCTACTGGAGGCAGAGGTGTAGAGCTC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTATTAAAATTCAAAGTGATCTACTGGAGGCAGAGGTGTAGAGCTC  296

seq1  ATGCAGAGAGAGTCACTGCAAATGATTAGATAACATATTAATAAGCTCAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGAGAGTCACTGCAAATGATTAGATAACATATTAATAAGCTCAT  346

seq1  ACAGAGAGCTGCTAGAGGCATACACAGCTGAATTGTGGGGTCCAGAAGAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGCTGCTAGAGGCATACACAGCTGAATTGTGGGGTCCAGAAGAG  396

seq1  CCTTAGAGAGGAAGGACAACATGACTGAATTTATAGATACTGGAATTGAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAGAGGAAGGACAACATGACTGAATTTATAGATACTGGAATTGAC  446

seq1  TATGGGTTAATAGACAATAATTCAAGTGTTATGTGCCAAGCAGTAGGGAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTTAATAGACAATAATTCAAGTGTTATGTGCCAAGCAGTAGGGAC  496

seq1  CAGACTAATCTTAAGTCCCCAGAGCAGTCATGAATTCTCTGGGATGGTCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAATCTTAAGTCCCCAGAGCAGTCATGAATTCTCTGGGATGGTCA  546

seq1  GATGGGGAAAAGTGGGTAGAGCTTTCACCATCTCAGGATTAGCTGTCATT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGAAAAGTGGGTAGAGCTTTCACCATCTCAGGATTAGCTGTCATT  596

seq1  TATAGGAATCCAGAAGAGAGTAGTTAGTTATACCTTTTGTTGTTAGTCTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAATCCAGAAGAGAGTAGTTAGTTATACCTTTTGTTGTTAGTCTG  646

seq1  GTATGTTTGATGGGTTTTTGGACCTGGTTTTTTAAGTATGGTTTTGATAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTGATGGGTTTTTGGACCTGGTTTTTTAAGTATGGTTTTGATAC  696

seq1  ACTCAAATGCCCTTGTTTCCAATACATCAGTAGTGACATGCGTGACAGGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAATGCCCTTGTTTCCAATACATCAGTAGTGACATGCGTGACAGGC  746

seq1  CAAAAGCCTGGATGCAGTCCTGAGGCGAAGAGTTTCATGGAAACTTAGTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCCTGGATGCAGTCCTGAGGCGAAGAGTTTCATGGAAACTTAGTC  796

seq1  TCCTGGAACTGTGGCATTCCATAGAATGTATGCTCCAATTTTGTCCTTGC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTGTGGCATTCCATAGAATGTATGCTCCAATTTTGTCCTTGC  846

seq1  AAATGGATCTGTGTGCTTTCTTTCAGTATTGTTTTGTTATAGGTGCCTCC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATCTGTGTGCTTTCTTTCAGTATTGTTTTGTTATAGGTGCCTCC  896

seq1  AAGCAATGACTTGCCAAATACCTAAGCAAAATCAAACTTTGCTTCCTGGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATGACTTGCCAAATACCTAAGCAAAATCAAACTTTGCTTCCTGGC  946

seq1  CTTCACCAATGCCCTAGTAGACATTGAGACAACCCTGGGCTTGGAATTCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCAATGCCCTAGTAGACATTGAGACAACCCTGGGCTTGGAATTCA  996

seq1  GTAAGAATGTTGCCTATTCAGTGACATTCAGAATTGCCTCTAGTATTGTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAATGTTGCCTATTCAGTGACATTCAGAATTGCCTCTAGTATTGTA  1046

seq1  AGAGAGACAGTGAAAGAAATCAGGCTTTACTATCTACTACATAGAGTTAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGTGAAAGAAATCAGGCTTTACTATCTACTACATAGAGTTAG  1096

seq1  AAATCTCAGTGCAAGCTTAGCAATGTAAGTTTAGAATTC  1132
      |||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCAGTGCAAGCTTAGCAATGTAAGTTTAGAATTC  1135

seq1: chr10_129417864_129418661
seq2: B6Ng01-109O04.g_69_866

seq1  GAATTCAGCAGGCATCCAAATGGTAGCAATTGTTTTTCAGGGAGATGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGGCATCCAAATGGTAGCAATTGTTTTTCAGGGAGATGTTT  50

seq1  ATGTTCAAGTTCTCTATTTAGTGTAGTTATATGGTCCATGCATTAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAAGTTCTCTATTTAGTGTAGTTATATGGTCCATGCATTAAATAA  100

seq1  TTTTCTTTGTATTACCCACAGTGTCATAAGAAATAAATCAATCCTAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGTATTACCCACAGTGTCATAAGAAATAAATCAATCCTAATCT  150

seq1  TAAGGACTTTTCATGTCCTCATTTTCTATATTGGATCTTGAAGTGATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACTTTTCATGTCCTCATTTTCTATATTGGATCTTGAAGTGATAAT  200

seq1  GAAGATTCTCATGAGAATTCGAGATTCATAACCACATTTTCCCAGGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTCTCATGAGAATTCGAGATTCATAACCACATTTTCCCAGGAGTC  250

seq1  AGAAATGTTCAAGTTATCCAATGTTCTTTCCAGACAATCTGTATTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTTCAAGTTATCCAATGTTCTTTCCAGACAATCTGTATTTTTAA  300

seq1  AAACAGATTCTCAATAGAGGAATCTCAAATGGATGAGAAAGAATTGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATTCTCAATAGAGGAATCTCAAATGGATGAGAAAGAATTGCTTA  350

seq1  AATAAATGATCAACATTATTAGTCACCAGGGAAATGCAAATCAAAATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGATCAACATTATTAGTCACCAGGGAAATGCAAATCAAAATGTC  400

seq1  TGTGAGATTTCATTTTATACTTGTCAGAATGGCTACAATCCATAAAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGATTTCATTTTATACTTGTCAGAATGGCTACAATCCATAAAACAG  450

seq1  GTGACAGCTCATGGTGGTGAAGATGTGAAAGATGAGGAACACTCCTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCTCATGGTGGTGAAGATGTGAAAGATGAGGAACACTCCTCCAG  500

seq1  TGCAGTTGGGAGTGCAAACTTCTACAGTCACTGTGGAAATCAGTGTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTGGGAGTGCAAACTTCTACAGTCACTGTGGAAATCAGTGTAGCA  550

seq1  GATCATCAGAAAATGAGGAATTGGTTTGATCTATCTCAAGATCCAGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCAGAAAATGAGGAATTGGTTTGATCTATCTCAAGATCCAGCTAT  600

seq1  AACATTTTGGAGTATATACCCAAAGGTTGTTCTGCCCTACTACAAGGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTGGAGTATATACCCAAAGGTTGTTCTGCCCTACTACAAGGACA  650

seq1  CTTTGTCTACTGTGCTCATTCCAGCATTATTCACAATAGCCAGAAACTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCTACTGTGCTCATTCCAGCATTATTCACAATAGCCAGAAACTAG  700

seq1  AAACAACCTAGGTGTTCATCAATTGAAGGATGAATAATAAAATGTGGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACCTAGGTGTTCATCAATTGAAGGATGAATAATAAAATGTGGTAG  750

seq1  ATTTGCACAATGGTGTATTACTCAAGTGTTAAAAATGACATCATGAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCACAATGGTGTATTACTCAAGTGTTAAAAATGACATCATGAAA  798