BAC Information

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BAC

Clone NameB6Ng01-111E17
Chromosome10 (Build37)6 (Build37)
Map Location 104,053,903 - 104,054,36374,694,355 - 74,694,389
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111E17.bB6Ng01-111E17.g
ACCDH917674DH917675
length955946
definitionDH917674|Mus musculus domesticus DNA, BAC clone: B6Ng01-111E17, 5' end.DH917675|Mus musculus domesticus DNA, BAC clone: B6Ng01-111E17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(74,694,355 - 74,694,389)
sequence
gaattctcaactgaggaataccgaatggctgagaagtacctgaaaaaatg
ttcgacatccttaatcatcagggaaacgcaaatcaaaacaaccttgagtt
tccacctcacaccagtcagaatggctaagaacaaaaaattcaggtgacag
cagatgctggcgaggatgaggagaaagaggaacactcctccactgctggt
gggattgcaagcttgttcaactactctggaagtcagtctggaggttcctc
agaaaactggacataatactaccgtaagatccagcaatacctctcctggg
catatactcagaagttccaactggtaataagaacacatgctccactgtgt
tcatagcagccttatttataatagccagaagctgtaaagaacccagatga
ccctcaacagaagaatggatacagaaaatgtggtacatttacacaatgga
gtatgactagctattaaaaacaatggatttatgaaattcttggacaaatg
gatgtatctggaggatatcatcctgagtgaggtaacccaatcataaaaga
agtcattagatatgtactcactgataagtggatattagcccagaaacata
gaacatccaagatacaatttgcaaaacacaagaaaatcaagaagagggaa
gaccaatgggtggatagttcattcctccttagaatagggaacaaaatacc
catgaaaggagttacagagacaaagtttggagctaagacgaaaggatgga
ctatccagagactacctcacccgggaatccatcctataatcagccaccaa
accgagacactattgcatatgccagtatattttgctgaagggaccctgtt
atagctgtctcgtatgagctatgccaatgcctggcaaatacagaagtaga
tgctcacagttatctataagatggacacagggcccccaatggagaagcta
gagaa
gaattcagagatctacttgactttatctcttgagattaaaggtgtttacc
accaccatgcctggatctaaacttagctgggtaggatcttacccccaaag
tctcttaatctgttatctcctaggacataggattcagctccatttcactt
catggtgcccctttaatacttgaaccatatattttatattttacctttct
atgcttgctacacttgttcaaaacactctttatgagacttaaccatagag
caaagtctctgctaggcttctttgaaacttcctttgtcagtgcaactcat
ataaacctctttaccttcgcctcaggtatactcttcagacaaaggcaaaa
agcagccacattcttcaccaaaatactcaaaaacagtctctaggccacat
actgaagttcttctccactgaaccttcttgggccacatctgcacagttca
aattattctcagcaacaaaattttccatattcctactaggatagctcagt
aagccccacttaaaacatggctttccaaattcaaagtcccaaaatccaca
ttcttccaaacaaaagcatggtcaggcttatcacagcaatagccagctcc
tggtaccaatttctgtcttagggtttcactgttgtgaacagacaccatga
ccaaggcaactcctataaaggacaacattaattaaggctggcttacaggt
tctgaggttcagtccattatcatcaagatgggaacatggcagcatccagg
cagacatggtgcaagaggaaataagaattctacatcttcatttaaaggct
gctaacagaatactaacttccaggcagagaggatgagggtcttaatgcct
accccatagtgacacacctactcaaagagggccacaccgcctaataaagc
aactccctcggccgagcatatacaaaccatcacatgtgtatatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-111E17.b_47_514 (reverse)

seq1  TTTAATAG---------CTCCATTGTGTAAATGTACCACATTTTCTGTAT  41
      ||||||||         |||||||||||||||||||||||||||||||||
seq2  TTTAATAGCTAGTCATACTCCATTGTGTAAATGTACCACATTTTCTGTAT  50

seq1  CTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATTA  91
      | |||| ||||||||||| |||||||||||||| ||||| ||||||||||
seq2  CCATTCTTCTGTTGAGGGTCATCTGGGTTCTTTACAGCTTCTGGCTATTA  100

seq1  TAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGTT  141
      ||||||||||||||||||| | |||||||||||||| ||| ||||| |||
seq2  TAAATAAGGCTGCTATGAACACAGTGGAGCATGTGTTCTTATTACCAGTT  150

seq1  GGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCGG  191
      ||   | ||||||  ||||||||||| ||||||||||||||||| | |||
seq2  GG---AACTTCTGAGTATATGCCCAGGAGAGGTATTGCTGGATCTTACGG  197

seq1  TAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGTG  241
      ||||| |||||||| |||||||| ||||| |||||| || ||||||||| 
seq2  TAGTATTATGTCCAGTTTTCTGAGGAACCTCCAGACTGACTTCCAGAGTA  247

seq1  GTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCT  291
      |||| |||||| ||||||||||||| || |||||||||||||||||||||
seq2  GTTGAACAAGCTTGCAATCCCACCAGCAGTGGAGGAGTGTTCCTCTTTCT  297

seq1  CCACATCCTCGCCAGCATCTGCTGTCACCTGAA-TTTTTGATCTTAGCCA  340
      || |||||||||||||||||||||||||||||| |||||| |||||||||
seq2  CCTCATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTTGTTCTTAGCCA  347

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||||||||||||||||||||| |||| |||||||||||||||| |||||
seq2  TTCTGACTGGTGTGAGGTGGAAACTCAAGGTTGTTTTGATTTGCGTTTCC  397

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||| |||||||||||||||| |||||| ||||||||
seq2  CTGATGATTAAGGATGTCGAACATTTTTTCAGGTACTTCTCAGCCATTCG  447

seq1  GTATTCCTCAGGTGAGAATTC  461
      ||||||||||| |||||||||
seq2  GTATTCCTCAGTTGAGAATTC  468

seq1: chr6_74694355_74694389
seq2: B6Ng01-111E17.g_796_829

seq1  TGGGAAGCATGGCAGCATCCAGGCAGACATGGTGC  35
      |||||| ||||||||||||||||||||||||||||
seq2  TGGGAA-CATGGCAGCATCCAGGCAGACATGGTGC  34