BAC Information

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BAC

Clone NameB6Ng01-112D17
Chromosome10 (Build37)
Map Location 119,429,869 - 119,582,630
singlet/doubletdoublet
Overlap geneGrip1, Helb, Irak3
Upstream geneLOC100042861, LOC674417, Cand1
Downstream geneTmbim4, 1190005P17Rik, Hmga2, LOC100042902, Msrb3, LOC100043488, Lemd3, Wif1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112D17.bB6Ng01-112D17.g
ACCDH918349DH918350
length1,1501,105
definitionDH918349|Mus musculus domesticus DNA, BAC clone: B6Ng01-112D17, 5' end.DH918350|Mus musculus domesticus DNA, BAC clone: B6Ng01-112D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,429,869 - 119,431,028)(119,581,526 - 119,582,630)
sequence
gaattccatgactccaggctttgagaggagtcacagagcccaggaatagt
tccaacctatgtcacagaggaaactcagtcctgtttctggaatcttttgg
gcccctcccaccaccagacctgtaccttcttcagcaaccaaggctatggc
ttctgccagtgtaactattcactgcatctagcccttacctcctctgcaga
caaagccaatggggagactacacctgtttccagttaacctacattataga
aagcagcagcagtcaggaggcatccccagaatgtcctttgtttctttggt
caccatcccttgcttctagagaagatgacagcaaaacgagctgaaaggaa
ggagatgaagagacccaatagttttcaccttccttttcgtccatctttaa
gaaaaggacagaagaaaaacgcagctcatggtaagctagcaggagccagg
aaggagtcagcttagatgctgcccaacaccccctcagctctctgtggaga
gggaactgatcaccctccaccccatccctttccaaatgaggtcatgtgac
tccgagtgagttgggtccacagcaggacaccctcaaccctgcagcttttt
agtgaggcaaaagtctcaaacagtggatcaaacaacaaaaacacattatc
ccaacaaagcctcgggctttttttttccccctctaaactttttttaaatg
tttttcctatctgataataaagttcgcagcctctataattagcacattaa
aaataaatgttcaaaagcgaaaagtttaaaagccattggctacctttggc
ttcccctaacctccctgatatttggaaagactgaaatagctaaagcgtcc
tgcaaacctaaagagctgtgaccagatctagccttctgaatggaaactga
gaagagtgaaggggatttgaaccgcacactagagagtgcgtacacgaatc
tccaactacagaaagctcctttctttctctgctagccaaccaactgatga
agcagctacctggtggccagttgtactggtggctttctgtgtctttggct
tttgattcttaagtctataattaacctggcccgatgtgaatttgttcaat
aaccatgggtgggtaacctactgccgtgaagattcctatgaaaggacgga

gaattcttcattagtgtgacaaattcagcttcccacagagaattctagac
taatagataacctttctagcttaaaacaaacaaacacctcacactcctgc
tgtggttgtagaagccattactaggtaaaaccagagtgttataaaatatc
aaatatggggccagtaaagtggcttagtaagtaaaggcatgtttaccagg
caagcctgctgacttgagtttgaccccccagaatgcttgcaaacaataag
ttatcctgtcacctcccggtgagctccccagaacactcccacctccattg
ataatttttttttaatctaatgaaaagtagtttgaaaggggcattttatt
taacagtctgaccccttaaagggtacatatttgttttcattgttttaaaa
tgtatttgtcatagatgtgatctgttcatttataagcaaatattatattt
ggggtaccagggatacatagctgttgtgggaaatattaaaacaactatca
atagctcatgctacaccagggactggtgggacacatggctccagtggggt
gctctgaactcggtgatctctttgacctggagctcctgaaatgtcctgaa
atgtaccagactcactaagttcccttggcaggtcgtggccatgccagtcc
cgcgcaacaactgcccacactgaggtcagccaccacaacacctagcaacc
tggtagaaacaaaactctagaagcttataattaatcagtcagatttatat
ctcagtaaattttcaattcacaggatgcgtgcacaatcaattcagaccaa
ttgataatggtacaagctgcccacctagattagacaagttgccccaattg
ttttaccctatatgataacacatctacctggggctattaaaattacttgg
attctgtatcaccctgttcatctccctctatcttgcttccttgtccctac
ctgtcttctctgtcccatcttctgcagctcttcgagctgcctcccttttt
ctctgtccatcacagacttcttgttggtataaaatattaaattaattggg
acagggaaattctgcttcacatggcggtcaagaatatgtgtgaccattct
caagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119429869_119431028
seq2: B6Ng01-112D17.b_45_1194

seq1  GAATTCCATGACTCCAGGCTTTGAGAGGAGTCACAGAGCCCAGGAATAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGACTCCAGGCTTTGAGAGGAGTCACAGAGCCCAGGAATAGT  50

seq1  TCCAACCTATGTCACAGAGGAAACTCAGTCCTGTTTCTGGAATCTTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCTATGTCACAGAGGAAACTCAGTCCTGTTTCTGGAATCTTTTGG  100

seq1  GCCCCTCCCACCACCAGACCTGTACCTTCTTCAGCAACCAAGGCTATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTCCCACCACCAGACCTGTACCTTCTTCAGCAACCAAGGCTATGGC  150

seq1  TTCTGCCAGTGTAACTATTCACTGCATCTAGCCCTTACCTCCTCTGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCAGTGTAACTATTCACTGCATCTAGCCCTTACCTCCTCTGCAGA  200

seq1  CAAAGCCAATGGGGAGACTACACCTGTTTCCAGTTAACCTACATTATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCAATGGGGAGACTACACCTGTTTCCAGTTAACCTACATTATAGA  250

seq1  AAGCAGCAGCAGTCAGGAGGCATCCCCAGAATGTCCTTTGTTTCTTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCAGCAGTCAGGAGGCATCCCCAGAATGTCCTTTGTTTCTTTGGT  300

seq1  CACCATCCCTTGCTTCTAGAGAAGATGACAGCAAAACGAGCTGAAAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCCTTGCTTCTAGAGAAGATGACAGCAAAACGAGCTGAAAGGAA  350

seq1  GGAGATGAAGAGACCCAATAGTTTTCACCTTCCTTTTCGTCCATCTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGAAGAGACCCAATAGTTTTCACCTTCCTTTTCGTCCATCTTTAA  400

seq1  GAAAAGGACAGAAGAAAAACGCAGCTCATGGTAAGCTAGCAGGAGCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGACAGAAGAAAAACGCAGCTCATGGTAAGCTAGCAGGAGCCAGG  450

seq1  AAGGAGTCAGCTTAGATGCTGCCCAACACCCCCTCAGCTCTCTGTGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTCAGCTTAGATGCTGCCCAACACCCCCTCAGCTCTCTGTGGAGA  500

seq1  GGGAACTGATCACCCTCCACCCCATCCCTTTCCAAATGAGGTCATGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTGATCACCCTCCACCCCATCCCTTTCCAAATGAGGTCATGTGAC  550

seq1  TCCGAGTGAGTTGGGTCCACAGCAGGACACCCTCAACCCTGCAGCTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGAGTGAGTTGGGTCCACAGCAGGACACCCTCAACCCTGCAGCTTTTT  600

seq1  AGTGAGGCAAAAGTCTCAAACAGTGGATCAAACAACAAAAACACATTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGCAAAAGTCTCAAACAGTGGATCAAACAACAAAAACACATTATC  650

seq1  CCAACAAAGCCTCGGGCTTTTTTTTTCCCCCTCTAAACTTTTTTTAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAAGCCTCGGGCTTTTTTTTTCCCCCTCTAAACTTTTTTTAAATG  700

seq1  TTTTTCCTATCTGATAATAAAGTTCGCAGCCTCTATAATTAGCACATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTATCTGATAATAAAGTTCGCAGCCTCTATAATTAGCACATTAA  750

seq1  AAATAAATGTTCAAAAGCGAAAAGTTTAAAAGCCATTGGCTACCTTTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGTTCAAAAGCGAAAAGTTTAAAAGCCATTGGCTACCTTTGGC  800

seq1  TTCCCCTAACCTCCCTGATATTTGGAAAGACTGAAATAGCTAAAGCGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTAACCTCCCTGATATTTGGAAAGACTGAAATAGCTAAAGCGTCC  850

seq1  TGCAAACCTAAAGAGCTGTGACCAGATCTAGCCTTCTGAATGGAAACTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACCTAAAGAGCTGTGACCAGATCTAGCCTTCTGAATGGAAACTGA  900

seq1  GAAGAGTGAAGGGGATTTGAACCGCACACTAGAGAGTGCGTACACGAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGAAGGGGATTTGAACCGCACACTAGAGAGTGCGTACACGAATC  950

seq1  TCCAACTACAGAAAGCTCCTTTCTTTCCTCTGCTAGCCAACCAACTGATG  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCCAACTACAGAAAGCTCCTTTCTTT-CTCTGCTAGCCAACCAACTGATG  999

seq1  AAGCAGGCTAACCTGTGCCAAGTTGTACTGGTTGCTTTCTGTGTTCTTTT  1050
      ||||| |||| |  ||| | |||||||||||| |||||||||||   |||
seq2  AAGCA-GCTACCTGGTGGCCAGTTGTACTGGTGGCTTTCTGTGT--CTTT  1046

seq1  GGCTTTTGATCTTTAAGTCTATAATTTACCTTGTCCAGATGTG-ATTTGT  1099
      ||||||||||  |||||||||||||| ||| || || |||||| ||||||
seq2  GGCTTTTGATTCTTAAGTCTATAATTAACC-TGGCCCGATGTGAATTTGT  1095

seq1  TCTAATTTAGCATATGTGTGTAACCTAACTGCCTGTGAAAGTTTCCTATT  1149
      ||  | | | |||  ||| ||||||| |||||| ||| ||| |||||| |
seq2  TC--AATAACCATGGGTGGGTAACCT-ACTGCC-GTG-AAGATTCCTA-T  1139

seq1  GAAAGGACGGA  1160
      |||||||||||
seq2  GAAAGGACGGA  1150

seq1: chr10_119581526_119582630
seq2: B6Ng01-112D17.g_67_1171 (reverse)

seq1  GCTTGAGAATGGTCAC-CATA-TCTTGACCGCCATGTGTAGCAGGATTTC  48
      |||||||||||||||| |||| |||||||||||||||| ||||| |||| 
seq2  GCTTGAGAATGGTCACACATATTCTTGACCGCCATGTGAAGCAGAATTT-  49

seq1  CCCTGT-CCAATTAATTTAATTATTTATA-CAACAAGAAGTCTGTGATTG  96
      |||||| ||||||||||||||  |||||| ||||||||||||||||| ||
seq2  CCCTGTCCCAATTAATTTAATATTTTATACCAACAAGAAGTCTGTGA-TG  98

seq1  GACAGAGAAAAAGGGAGGCAGCTCGAAGAGCTGCAG-AGATGGGGACAGA  145
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  GACAGAGAAAAAGGGAGGCAGCTCGAAGAGCTGCAGAAGAT-GGGACAGA  147

seq1  GAAGACAGGTAGGGACAAGGAAGCAAGATAGAGGGAGATGAACAGGGTGA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGGTAGGGACAAGGAAGCAAGATAGAGGGAGATGAACAGGGTGA  197

seq1  TACAGAATCCAAGTAATTTTAATAGCCCCAGGTAGATGTGTTATCATATA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATCCAAGTAATTTTAATAGCCCCAGGTAGATGTGTTATCATATA  247

seq1  GGGTTAAAACAATTGGGGCAACTTGTCTAATCTAGGTGGGCAGCTTGTAC  295
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGG-TAAAACAATTGGGGCAACTTGTCTAATCTAGGTGGGCAGCTTGTAC  296

seq1  CATTATCAATTGGTCCTGAATTGATTGTGCACGCATCCTGTGAATTGAAA  345
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CATTATCAATTGGT-CTGAATTGATTGTGCACGCATCCTGTGAATTGAAA  345

seq1  ATTTACTGAGATATAAATCTGACTGATTAATTATAAGCTTCTAGAGTTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTGAGATATAAATCTGACTGATTAATTATAAGCTTCTAGAGTTTT  395

seq1  GTTTCTACCAGGTTGCTAGGTGTTGTGGTGGCTGACCTCAGTGTGGGCAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTACCAGGTTGCTAGGTGTTGTGGTGGCTGACCTCAGTGTGGGCAG  445

seq1  TTGTTGCGCGGGACTGGCATGGCCACGACCTGCCAAGGGAACTTAGTGAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCGCGGGACTGGCATGGCCACGACCTGCCAAGGGAACTTAGTGAG  495

seq1  TCTGGTACATTTCAGGACATTTCAGGAGCTCCAGGTCAAAGAGATCACCG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTACATTTCAGGACATTTCAGGAGCTCCAGGTCAAAGAGATCACCG  545

seq1  AGTTCAGAGCACCCCACTGGAGCCATGTGTCCCACCAGTCCCTGGTGTAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGAGCACCCCACTGGAGCCATGTGTCCCACCAGTCCCTGGTGTAG  595

seq1  CATGAGCTATTGATAGTTGTTTTAATATTTCCCACAACAGCTATGTATCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCTATTGATAGTTGTTTTAATATTTCCCACAACAGCTATGTATCC  645

seq1  CTGGTACCCCAAATATAATATTTGCTTATAAATGAACAGATCACATCTAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACCCCAAATATAATATTTGCTTATAAATGAACAGATCACATCTAT  695

seq1  GACAAATACATTTTAAAACAATGAAAACAAATATGTACCCTTTAAGGGGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATACATTTTAAAACAATGAAAACAAATATGTACCCTTTAAGGGGT  745

seq1  CAGACTGTTAAATAAAATGCCCCTTTCAAACTACTTTTCATTAGATTAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTTAAATAAAATGCCCCTTTCAAACTACTTTTCATTAGATTAAA  795

seq1  AAAAAATTATCAATGGAGGTGGGAGTGTTCTGGGGAGCTCACCGGGAGGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTATCAATGGAGGTGGGAGTGTTCTGGGGAGCTCACCGGGAGGT  845

seq1  GACAGGATAACTTATTGTTTGCAAGCATTCTGGGGGGTCAAACTCAAGTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGATAACTTATTGTTTGCAAGCATTCTGGGGGGTCAAACTCAAGTC  895

seq1  AGCAGGCTTGCCTGGTAAACATGCCTTTACTTACTAAGCCACTTTACTGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCTTGCCTGGTAAACATGCCTTTACTTACTAAGCCACTTTACTGG  945

seq1  CCCCATATTTGATATTTTATAACACTCTGGTTTTACCTAGTAATGGCTTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATTTGATATTTTATAACACTCTGGTTTTACCTAGTAATGGCTTC  995

seq1  TACAACCACAGCAGGAGTGTGAGGTGTTTGTTTGTTTTAAGCTAGAAAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCACAGCAGGAGTGTGAGGTGTTTGTTTGTTTTAAGCTAGAAAGG  1045

seq1  TTATCTATTAGTCTAGAATTCTCTGTGGGAAGCTGAATTTGTCACACTAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTATTAGTCTAGAATTCTCTGTGGGAAGCTGAATTTGTCACACTAA  1095

seq1  TGAAGAATTC  1105
      ||||||||||
seq2  TGAAGAATTC  1105