BAC Information

Click to search

BAC

Clone NameB6Ng01-112K10
Chromosome10 (Build37)
Map Location 103,094,917 - 103,240,263
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112K10.bB6Ng01-112K10.g
ACCDH918659DH918660
length1,044889
definitionDH918659|Mus musculus domesticus DNA, BAC clone: B6Ng01-112K10, 5' end.DH918660|Mus musculus domesticus DNA, BAC clone: B6Ng01-112K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,239,210 - 103,240,263)(103,094,917 - 103,097,701)
sequence
gaattcattttatgttgccatctacttctgggcataaagtatatcttaaa
agtagtgtgttttcttactgagatttcatttggaaaaactaaatttttgt
ttgaaagttactatcaattggagatagtgtctggtttagatatggagcac
acgtgtacttctcttttcatctgtaggagtgttaacatcattgagaaagg
agaggaaaggaagtggtgagcatgacatgaattatgaaagtatttcaaag
aattgtaatagatagaattgctaaattattaatgtgctgtgagaatatat
atgtagtacaaggtttcatatttattccaggcctctacttgagacattga
atggttttgtgatctacagagacgtgaaagattgtgagaaaatcaggaat
agatgttactatgctgttgtgtgaacttttcctgtgtttatgccaacaac
tttctattcatccaagaggggcaccagcaacagagcagagcaacaatgtc
cctgaagccgatgctgaaagagagctcactgtttttactgagaggaatgt
ggatgatgggagggtagcaccatatccaagaagctcactccaaccaagat
ggcaacaaaaagaaatgaagatttagatatgccagttcttccccttatgt
tcattatgagcacttgaccttctattctgagtgaataagcatgctattga
catctttgaattaaagaatgacatcctcattccagcattccatttgataa
gaaatagaatcctactaccttcctgtgggaacatctggtaaaaattatgc
aatcacttctcctcaaaatagttgaggaaagaagtttctagaaacttatt
ttttcattagtattgaacaatataatttgtcatttataataccttaatta
tacatttgtaaacccgaaaaatcttctttattcatgtatatgtttctctc
agaaaaatattctgaagcttcaattagcatacaccagaaagatttgaggg
tatattaaatatgtgctgtgtcagcaagaactattgtaattaca
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatgtgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtattattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttcttttttttttttttttttttttttgtgtgtgcaaatattatat
tatacaagccattcctcttattctccgggcagatttaggtagtaagttct
tgagtgtgacttgatgtgagtattttttagtgaatttattctgtaatcct
aggaatgagtggcagataatgtgggatgtttttttttttttttttttagc
tgtttacttttttttttttccattttttattagggatttaactcatttac
atttccaatgctataccaaaagtcccccatatccacccaccccccctccc
ctgccccccactccccctttttggcccgggtgtccccttgactggggaaa
taaagtttcaatttcaatgggccctctctttcagtgatggccgacaagcc
attttttgaatatatgccgcctgaatcaaaacttccggggtactggtaat
tcaaaatgtttgtccccctaaagggttgcagatccttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103239210_103240263
seq2: B6Ng01-112K10.b_44_1087 (reverse)

seq1  TGTATATTACAAATAGTTCTTAGCATGGACACAGCAACATATTTTATATT  50
      |||| ||||| |||||||||| ||   |||||||| |||||||| ||| |
seq2  TGTA-ATTAC-AATAGTTCTT-GC--TGACACAGC-ACATATTTAATA-T  43

seq1  ACCCTCAAATCTTTCTGGTTGTATGCTAATTGAAGCTTCAGAATAGTTTT  100
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  ACCCTCAAATCTTTCTGG-TGTATGCTAATTGAAGCTTCAGAATA-TTTT  91

seq1  TCTGAGAGAAACATATACATGGAATAAAG-AGATTTTTCGGGTTTACAAA  149
      |||||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  TCTGAGAGAAACATATACAT-GAATAAAGAAGATTTTTCGGGTTTACAAA  140

seq1  TGTTATAATTAAGGTATTATAAATGAC-AAGTATATTGTTCAATACTCAT  198
      || |||||||||||||||||||||||| || |||||||||||||||| ||
seq2  TG-TATAATTAAGGTATTATAAATGACAAATTATATTGTTCAATACTAAT  189

seq1  GAAAAAATAAGTTTCTAGAAACTTCTTTCCTCAACTATTTTGAGGAGAAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATAAGTTTCTAGAAACTTCTTTCCTCAACTATTTTGAGGAGAAG  239

seq1  TGATTGCATAATTTTTAACCAGATGTTCCCACAGGAAGGTAGTAGGATTC  298
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGATTGCATAATTTTT-ACCAGATGTTCCCACAGGAAGGTAGTAGGATTC  288

seq1  TATTTCTTATCAAATGGAATGCTGGAATGAGGATGTCATTCTTTAATTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTATCAAATGGAATGCTGGAATGAGGATGTCATTCTTTAATTCA  338

seq1  AAGATGTCAATAGCATGCTTATTCACTCAGAATAGAAGGTCAAGTGCTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTCAATAGCATGCTTATTCACTCAGAATAGAAGGTCAAGTGCTCA  388

seq1  TAATGAACATAAGGGGAAGAACTGGCATATCTAAATCTTCATTTCTTTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAACATAAGGGGAAGAACTGGCATATCTAAATCTTCATTTCTTTTT  438

seq1  GTTGCCATCTTGGTTGGAGTGAGCTTCTTGGATATGGTGCTACCCTCCCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCATCTTGGTTGGAGTGAGCTTCTTGGATATGGTGCTACCCTCCCA  488

seq1  TCATCCACATTCCTCTCAGTAAAAACAGTGAGCTCTCTTTCAGCATCGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCACATTCCTCTCAGTAAAAACAGTGAGCTCTCTTTCAGCATCGGC  538

seq1  TTCAGGGACATTGTTGCTCTGCTCTGTTGCTGGTGCCCCTCTTGGATGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGACATTGTTGCTCTGCTCTGTTGCTGGTGCCCCTCTTGGATGAA  588

seq1  TAGAAAGTTGTTGGCATAAACACAGGAAAAGTTCACACAACAGCATAGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTTGTTGGCATAAACACAGGAAAAGTTCACACAACAGCATAGTA  638

seq1  ACATCTATTCCTGATTTTCTCACAATCTTTCACGTCTCTGTAGATCACAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTATTCCTGATTTTCTCACAATCTTTCACGTCTCTGTAGATCACAA  688

seq1  AACCATTCAATGTCTCAAGTAGAGGCCTGGAATAAATATGAAACCTTGTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTCAATGTCTCAAGTAGAGGCCTGGAATAAATATGAAACCTTGTA  738

seq1  CTACATATATATTCTCACAGCACATTAATAATTTAGCAATTCTATCTATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATATATTCTCACAGCACATTAATAATTTAGCAATTCTATCTATT  788

seq1  ACAATTCTTTGAAATACTTTCATAATTCATGTCATGCTCACCACTTCCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTTTGAAATACTTTCATAATTCATGTCATGCTCACCACTTCCTT  838

seq1  TCCTCTCCTTTCTCAATGATGTTAACACTCCTACAGATGAAAAGAGAAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCCTTTCTCAATGATGTTAACACTCCTACAGATGAAAAGAGAAGT  888

seq1  ACACGTGTGCTCCATATCTAAACCAGACACTATCTCCAATTGATAGTAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTGTGCTCCATATCTAAACCAGACACTATCTCCAATTGATAGTAAC  938

seq1  TTTCAAACAAAAATTTAGTTTTTCCAAATGAAATCTCAGTAAGAAAACAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACAAAAATTTAGTTTTTCCAAATGAAATCTCAGTAAGAAAACAC  988

seq1  ACTACTTTTAAGATATACTTTATGCCCAGAAGTAGATGGCAACATAAAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTTTAAGATATACTTTATGCCCAGAAGTAGATGGCAACATAAAAT  1038

seq1  GAATTC  1054
      ||||||
seq2  GAATTC  1044

seq1: chr10_103094917_103097701
seq2: B6Ng01-112K10.g_67_955

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTGAAGTCCACCTTCTTGAATTCTTTATATGTGTTGGATATTAGTCCC  100
                                                        
seq2  --------------------------------------------------  0

seq1  CTATCTGTTTTAGGATAGGTAAAGATCCTTTCCCAGTCTGTTGGTGGTCT  150
                                                        
seq2  --------------------------------------------------  0

seq1  CTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200
                                                        
seq2  --------------------------------------------------  0

seq1  TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT  250
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC  300
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGA  350
                                                        
seq2  --------------------------------------------------  0

seq1  TCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGC  400
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGCAAATATTAT  450
                                                        
seq2  --------------------------------------------------  0

seq1  ATTATACAAGCCATTCCTCTTATTCTCCGGGCAGATTTAGGTAGTAAGTT  500
                                                        
seq2  --------------------------------------------------  0

seq1  CTTGAGTGTGACTTGATGTGAGTATTTTTTAGTGAATTTATTCTGTAATC  550
                                                        
seq2  --------------------------------------------------  0

seq1  CTAGGAATGAGTGGCAGATAATGTGGGATGTTTTTTTTTTTTTTTTTTTT  600
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTTTTTTTTTTTGCTGTTTACTTTTTTTTTTTCCATTTTTTATTAGG  650
                                                        
seq2  --------------------------------------------------  0

seq1  TATTTAACTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATATCC  700
                                                        
seq2  --------------------------------------------------  0

seq1  ACCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTGT  750
                                                        
seq2  --------------------------------------------------  0

seq1  TCCCCTGTACTGGGGCATATAAAGTTTGCAATTTCAATGGGCCTCTCTTT  800
                                                        
seq2  --------------------------------------------------  0

seq1  CCAGTGATGGCCGACTAGGCCATCTTTTGATATATATGCAGCTAGAGTCA  850
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTT  900
                                                        
seq2  --------------------------------------------------  0

seq1  GCAGATCCCTTTAGCTCCGTGGCTACTTTCTCTAGCTCCTCCATTGGGAG  950
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTATGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGC  1000
                                                        
seq2  --------------------------------------------------  0

seq1  TAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAA  1050
                                                        
seq2  --------------------------------------------------  0

seq1  TAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATTAT  1100
                                                        
seq2  --------------------------------------------------  0

seq1  GGGGTGGATCCCTGGATATGGCAGTCTCTACATGGTCCATCCTTTCATCT  1150
                                                        
seq2  --------------------------------------------------  0

seq1  CAGCTCCAAACTTTCTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCA  1200
                                                        
seq2  --------------------------------------------------  0

seq1  AATCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTCTTCTTGAG  1250
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCATGTGTTTAGCAAATTATATCTTATATCTTGGGTATCCTAGGTTTG  1300
                                                        
seq2  --------------------------------------------------  0

seq1  GGGCTAATATCCACTTATCAGTGAATACATATTGTGTGAGTTTCTTTGTG  1350
                                                        
seq2  --------------------------------------------------  0

seq1  AATGTGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGGCT  1400
                                                        
seq2  --------------------------------------------------  0

seq1  AGGAATTTCATAAATTCATTCTTTTTAATAGCAGAGTAGTACTCCATTGT  1450
                                                        
seq2  --------------------------------------------------  0

seq1  GTAGATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTAG  1500
                                                        
seq2  --------------------------------------------------  0

seq1  ATTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTG  1550
                                                        
seq2  --------------------------------------------------  0

seq1  GAGCATGTGTCCTTCTTACCTGTTGGGGCATCTTCTGGATATATGCCCAG  1600
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAGTTTTCTGAGGA  1650
                                                        
seq2  --------------------------------------------------  0

seq1  ACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGCACTCCCACCAA  1700
                                                        
seq2  --------------------------------------------------  0

seq1  CAATGGAGGAGTGTTCCTCTTTCTCCACATCCATGCCAGCATCTGCTGTC  1750
                                                        
seq2  --------------------------------------------------  0

seq1  ACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCA  1800
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTTGTTTTGTTTTGCATTTCCCTGATGATTAAAGATGTTGAACATTTT  1850
                                                        
seq2  --------------------------------------------------  0

seq1  TTCAAGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTT  1900
                                            ||||||||||||
seq2  --------------------------------------GAATTCTTTGTT  12

seq1  CAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCA  1950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGAAGTCCA  62

seq1  CCTTCTTGAGTTCTTTATATGTGTTGGATATTAGTCCCCTATCTGATTTA  2000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTGAGTTCTTTATATGTGTTGGATATTAGTCCCCTATCTGATTTA  112

seq1  GGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTATTATT  2050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTATTATT  162

seq1  GACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATT  2100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATT  212

seq1  TGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAAT  2150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAAT  262

seq1  TTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTAT  2200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTAT  312

seq1  AAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTTAGATT  2250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGATCCATTTAGATT  362

seq1  TGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTTTTT  2300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTTTTT  412

seq1  TTTTTTTTTTTTTTTTTTTGTGTGTGCAAATATTATATTATACAAGCCAT  2350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTGTGTGTGCAAATATTATATTATACAAGCCAT  462

seq1  TCCTCTTATTCTCCGGGCAGATTTAGGTAGTAAGTTCTTGAGTGTGACTT  2400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTATTCTCCGGGCAGATTTAGGTAGTAAGTTCTTGAGTGTGACTT  512

seq1  GATGTGAGTATTTTTTAGTGAATTTATTCTGTAATCCTAGGAATGAGTGG  2450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAGTATTTTTTAGTGAATTTATTCTGTAATCCTAGGAATGAGTGG  562

seq1  CAGATAATGTGGGATGTTTTTTTTTTTTTTTTTTTAGCTGTTTACTTTTT  2500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATGTGGGATGTTTTTTTTTTTTTTTTTTTAGCTGTTTACTTTTT  612

seq1  TTTTTTTCCATTTTTTATTAGGTATTTAACTCATTTACATTTCCAATGCT  2550
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTTTTTCCATTTTTTATTAGGGATTTAACTCATTTACATTTCCAATGCT  662

seq1  ATACCAAAAGTCCCCCATATCCACCCACCCCCACTCCCCTGCCCACCCAC  2600
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  ATACCAAAAGTCCCCCATATCCACCCACCCCCCCTCCCCTGCCC-CCCAC  711

seq1  TCCCCCTTTTTGGCCCTGGTGTTCCCCTGTACTGGGGCATATAAAGTTTG  2650
      |||||||||||||||| |||| ||||||  ||||||| | ||||||||| 
seq2  TCCCCCTTTTTGGCCCGGGTG-TCCCCTTGACTGGGG-AAATAAAGTTT-  758

seq1  CAATTTCAATGGG-CCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTT  2699
      ||||||||||||| ||||||||| |||||||||||||| | ||||| |||
seq2  CAATTTCAATGGGCCCTCTCTTT-CAGTGATGGCCGAC-AAGCCATTTTT  806

seq1  TGATATATATGCAGCTAGAATCAAGAGCTCCGGGGTACTGGTTAGTTCAT  2749
      ||| |||||||| ||  ||||||| |  ||||||||||||| || |||| 
seq2  TGA-ATATATGCCGCCTGAATCAAAACTTCCGGGGTACTGG-TAATTCAA  854

seq1  AATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTA  2785
      ||||||  ||| |||| |||||||||||| ||||||
seq2  AATGTTTGTCCCCCTAAAGGGTTGCAGAT-CCTTTA  889