BAC Information

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BAC

Clone NameB6Ng01-113I11
Chromosome10 (Build37)
Map Location 98,968,248 - 98,969,190
singlet/doubletsinglet
Overlap genenone
Upstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232
Downstream geneLOC667502, Csl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113I11.bB6Ng01-113I11.g
ACCDH919300DH919301
length9401,079
definitionDH919300|Mus musculus domesticus DNA, BAC clone: B6Ng01-113I11, 5' end.DH919301|Mus musculus domesticus DNA, BAC clone: B6Ng01-113I11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtatatctagccgggcgtagtggcgcacgcctttaatcccagc
actcgggaggcagaggcaggcggatttgagttcgaggccagcctggtcta
caaagtgagtgccaggacagccaaggctacacagagaaaccctgtctcaa
aaaaaaccaaaaaacaaaaaaagaattcagtatatctgatgaattcatga
aaggccaggaacaatagagattagtggaccaagggaagaggagcctgaga
cacagtggcagatgttggtgggagcagaaccactcggtgtattggacacc
atggtaaagtccttgtctctgtctccaaagcatctcaaaggctttgaatg
agcttgaatcaggaagtggtttcctctttgaatctgttgggacatgcaag
aaaagaagtaggacatctgctaggggactcctagagctgtccagatgcat
gtggggggtgccttgggttacggtggtgggaagctgtgggaactgagctg
taagatgaacaacagtcagccctgtaggcttttgtggatcattgacttgg
tataagatgcaacgatggggatgatctgcctgatttctaggattctgtct
agagtatgtttatggttctgccctttccctcaggagaaatcgatttgaaa
gggaagtgtatttgttctgatttggatatgttatactaagtagtagatgg
cttggtgaacacttttactctaaagatagatacttggcaaaaaggatgaa
cgttgatgtccttaaaagacatctaagaccacaggaataaatgagatgcc
tcggatggtgggcagtaccattccaagaagatatcccaaaacatcataaa
taaaacctagctatgtgtcagttggcctgggggctactataacagcatcc
tccattgctcctgttacatcaattgtgtggatgaaagagt
gaattcaagaagtctaaagaagacacacagacatatccagattaatgaaa
ttaaggagaaagaattacttaaggagaataaatttctcagtgatgaaact
gcccaaaagaagatgataaaaatgatgaaggcaattcaggacttgagaat
gggatttaataaggagataaaatcattatagaagactcaagctgaaatga
tggtgagatttaaagacctaataacccaacaagaacacctaaaggaaagt
cttataagtagaataaattaaacagaaggtcaaatgtcaggtcttaagaa
taaaaatagaagatctcagccaagtaagaaggaatacaaaaaaatttaaa
gccacagtaaaggaacatatagaaaatgtgaaacatcataataaaaccaa
acctttgaaatataaaacataggaagggatgatacttcatcataatcaaa
gaaacatttaaccaagaagacattaccatcctaaacatatttgtaccaaa
ttctggtgcacccaattatttatatatatatatatatatatatatatata
tatatatatatatatatacacagattagtaatgatctactacacttggtg
atttcaacattccacttttctccaacagacagatcacgtggaaaaaaatg
aacagaaccatcagaattaattaatattatacatcaaatggacttaacaa
ttatctatagaatattttaccccaaatcaaagaatgtataatctatccag
cagtacacagacacttttatgaatgagagcaggcctagggacacaaagca
cagcttttcgaattgaaaaagatgaaaatcactcttttgtaccctatcta
accacactgcataaaacttaaattgacagcaagcaaatctctaggaaata
cacaagcctatggagattaaccactcactgcaaaagatgacgagacaaga
agaaattaagaaaaaaaaaccaaaactttccagagttaatgaacacacca
cacagctgttgggctgcttgaagcatgctgtgagggaatactccttaagt
gcctaataaacgcagaaaagacccggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98968248_98969190
seq2: B6Ng01-113I11.b_48_987

seq1  GAATTCAGTATATCTAGCCGGGCGTAGTGGCGCACGCCTTTAATCCCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATATCTAGCCGGGCGTAGTGGCGCACGCCTTTAATCCCAGC  50

seq1  ACTCGGGAGGCAGAGGCAGGCGGATTTGAGTTCGAGGCCAGCCTGGTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGGAGGCAGAGGCAGGCGGATTTGAGTTCGAGGCCAGCCTGGTCTA  100

seq1  CAAAGTGAGTGCCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGAGTGCCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTCAA  150

seq1  AAAAAACCAAAAAACAAAAAAAGAATTCAGTATATCTGATGAATTCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCAAAAAACAAAAAAAGAATTCAGTATATCTGATGAATTCATGA  200

seq1  AAGGCCAGGAACAATAGAGATTAGTGGACCAAGGGAAGAGGAGCCTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGGAACAATAGAGATTAGTGGACCAAGGGAAGAGGAGCCTGAGA  250

seq1  CACAGTGGCAGATGTTGGTGGGAGCAGAACCACTCGGTGTATTGGACACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGGCAGATGTTGGTGGGAGCAGAACCACTCGGTGTATTGGACACC  300

seq1  ATGGTAAAGTCCTTGTCTCTGTCTCCAAAGCATCTCAAAGGCTTTGAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAAAGTCCTTGTCTCTGTCTCCAAAGCATCTCAAAGGCTTTGAATG  350

seq1  AGCTTGAATCAGGAAGTGGTTTCCTCTTTGAATCTGTTGGGACATGCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAATCAGGAAGTGGTTTCCTCTTTGAATCTGTTGGGACATGCAAG  400

seq1  AAAAGAAGTAGGACATCTGCTAGGGGACTCCTAGAGCTGTCCAGATGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGTAGGACATCTGCTAGGGGACTCCTAGAGCTGTCCAGATGCAT  450

seq1  GTGGGGGGTGCCTTGGGTTACGGTGGTGGGAAGCTGTGGGAACTGAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGGTGCCTTGGGTTACGGTGGTGGGAAGCTGTGGGAACTGAGCTG  500

seq1  TAAGATGAACAACAGTCAGCCCTGTAGGCTTTTGTGGATCATTGACTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGAACAACAGTCAGCCCTGTAGGCTTTTGTGGATCATTGACTTGG  550

seq1  TATAAGATGCAACGATGGGGATGATCTGCCTGATTTCTAGGATTCTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGATGCAACGATGGGGATGATCTGCCTGATTTCTAGGATTCTGTCT  600

seq1  AGAGTATGTTTATGGTTCTGCCCTTTCCCTCAGGAGAAATCGATTTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATGTTTATGGTTCTGCCCTTTCCCTCAGGAGAAATCGATTTGAAA  650

seq1  GGGAAGTGTATTTGTTCTGATTTGGATATGTTATACTAAGTAGTAGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTGTATTTGTTCTGATTTGGATATGTTATACTAAGTAGTAGATGG  700

seq1  CTTGGTGAACAC-TTTACTCTAAAGATAGATACTTGGCAAAAAGGATGAA  749
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGAACACTTTTACTCTAAAGATAGATACTTGGCAAAAAGGATGAA  750

seq1  CGTTGATGTCCTTAAAAGACATCTAAGACCACAGGAATAAATGAGATGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGATGTCCTTAAAAGACATCTAAGACCACAGGAATAAATGAGATGCC  800

seq1  TCGGATGGTGGGCAGTACCATTCCAAGAAGATATCCCAAAACATCATAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATGGTGGGCAGTACCATTCCAAGAAGATATCCCAAAACATCATAAA  850

seq1  TAAAACCTAGCTATGTGTCAGTTGGCCTGGGGGCTAGCTATAAACAGCAT  899
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  TAAAACCTAGCTATGTGTCAGTTGGCCTGGGGGCTA-CTAT-AACAGCAT  898

seq1  CCTCCATTGCTCCTGTTAACATCAATTGTGTGGGATGAAAGAGT  943
      ||||||||||||||||| ||||||||||||| ||||||||||||
seq2  CCTCCATTGCTCCTGTT-ACATCAATTGTGT-GGATGAAAGAGT  940