BAC Information

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BAC

Clone NameB6Ng01-113K03
Chromosome10 (Build37)
Map Location 50,725,017 - 50,769,362
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629652, Ascc3, Sim1
Downstream geneLOC268300, LOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113K03.bB6Ng01-113K03.g
ACCDH919378DH919379
length1,0661,045
definitionDH919378|Mus musculus domesticus DNA, BAC clone: B6Ng01-113K03, 5' end.DH919379|Mus musculus domesticus DNA, BAC clone: B6Ng01-113K03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,768,290 - 50,769,362)(50,725,017 - 50,726,068)
sequence
gaattccaagtaaccactgggtagctcacaaccttttgtaatggaatccg
atgccaccttctgatgtgtctgaagtcaataactacagtgtacttaatat
acttaaatgaatatttttaaaaattaagtccatacatatttctatagatt
ttggcaagcttcgcataaagccataagctaatttttatagcataggggct
tgtctttatagagattaaagtttagggatcacttcctaggcatttatgaa
acatactgaagtccaaggactttgggcaaggtcattgctgactaaggagt
acatacttgctctttctcttactccctgtgcaggtagccagaagattggc
tttgtcctttctgctcctatggttctaatctagatgttgacacaacaagc
ccttcgtagagtctgaaagaggaatcactgtacaaaatgtatcaatactc
agctctgttctttttgtttctagctttactgggtgaaagtccatctaaga
agtgacatttcatatttacgtatgcagcctttgtgagtataatattggga
atgttttcctacttttacagactgaataaaagcctttctgtgtagctctc
ccctgcatctggggcctcacattagtgaaagtgatccattcagttctcac
taatcaaaatttctaagttttctactttcttagatgatcaagtctagttc
ctctgcaaagtatgttgtctcttgttgctgttatagtaacataaattaag
ctttgtggcctgattttcatctgtaaactgtacacagggatcatatcaga
agctacagctgttatggtgcgatatggatataatgtacctgtcacatttt
cttcttgatcattatatttatgcccataaattacacccactgttagcttt
tggacagtggtatctgccaagtcttactatagcgagtatagaataattat
caagaatatttgactgttgcatacaaggcataaatggcaaagagaaagag
aatagccgaagtgtggaggaatacagaaaagggcttgaggaaataatcaa
aattattatgccatgt
cttagatgtacatgtatgcaccacatacttgctgcatgtttgcagagtca
gaatagggtatggaaagttttgggctgccatgtggttttgagaactgaac
tctggttctgggcaagagcagcaccagtcatcaaacaagaggacactgag
tcatctccctagctgctttattgttacatttcttctaaggtatttactaa
gatcacatagatttcttttctgtcttgtcttttcctgtatgtttgtttaa
tttgggcttaacacagaaagtactcttttttgcatagttaacttacatta
ttcatatctgttaaaacattatgatttcaaacactttcaatcactgtgtt
gatttttctttgtaaacagcagtgcttatttcacaattttaaaatgtatt
tccttaatgttcttaaaattataaattcttttagattattggtggatgct
taaattgtatgaaatgccttttggcaaacagaatagttatttttttaaac
ttgaaatatttttttcctaagctgaaacattcttactttgtgacatatat
atacatatatatatataaatattaggagctttggatacatacacactctc
acacatatatatgcatgcacacaatatatgtatatttctacattgctgga
tataaagtttaactgtatattttccattacattgttagttgtaactcagt
tccttgttgttgacttttttcatatagacaggcacgttatacctaccatt
cagtcaccaaggcatcacatcacagataaggccaggaaacagtagatcct
aaatttgtgcctatatttgttcttggcagacctgaatttcagttccttac
tgagaagtcacttattacacatgtttgtttatttgtgaattgtattacac
tttcaaattattaatagaatatagaaagtattactgttggctcatttgct
ttagtagaaaaaaaaaacagtttgaattttctttacagaaaattaatgta
gaaagcaagcaaagatttttaagaacctctgcatctgttaataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_50768290_50769362
seq2: B6Ng01-113K03.b_47_1112 (reverse)

seq1  ACATGTGCATAATATATTTTGATTATATTCCTCTAGCCCTCTCTTGTACT  50
      ||||| |||||||| ||||||||||| |||||| |||||| |  |||| |
seq2  ACATG-GCATAATA-ATTTTGATTAT-TTCCTCAAGCCCTTTTCTGTATT  47

seq1  CCTCC-CACTTCTGCTATTCTTCCTTTCTCCTTTGCCATTTATGGCCTGG  99
      ||||| |||||| ||||||||  |||||| ||||||||||||| |||| |
seq2  CCTCCACACTTCGGCTATTCT--CTTTCT-CTTTGCCATTTAT-GCCTTG  93

seq1  TATGCAACAGTCAATTATTCTTGATAATTATTACTATACTCGCTATAGTA  149
      |||||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  TATGCAACAGTCAAATATTCTTGATAATTATT-CTATACTCGCTATAGTA  142

seq1  AGACTTGGCAGATACCACTGTCCAAAAGCTAACAGTGGGTGTAATTTATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGCAGATACCACTGTCCAAAAGCTAACAGTGGGTGTAATTTATG  192

seq1  GGCATAAATATAATGATCAAGAAGAAAATGTGACAGGTACATTATATCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAATATAATGATCAAGAAGAAAATGTGACAGGTACATTATATCCA  242

seq1  TATCGCACCATAACAGCTGTAGCTTCTGATATGATCCCTGTGTACAGTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGCACCATAACAGCTGTAGCTTCTGATATGATCCCTGTGTACAGTTT  292

seq1  ACAGATGAAAATCAGGCCACAAAGCTTAATTTATGTTACTATAACAGCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGAAAATCAGGCCACAAAGCTTAATTTATGTTACTATAACAGCAA  342

seq1  CAAGAGACAACATACTTTGCAGAGGAACTAGACTTGATCATCTAAGAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGACAACATACTTTGCAGAGGAACTAGACTTGATCATCTAAGAAAG  392

seq1  TAGAAAACTTAGAAATTTTGATTAGTGAGAACTGAATGGATCACTTTCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACTTAGAAATTTTGATTAGTGAGAACTGAATGGATCACTTTCAC  442

seq1  TAATGTGAGGCCCCAGATGCAGGGGAGAGCTACACAGAAAGGCTTTTATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGAGGCCCCAGATGCAGGGGAGAGCTACACAGAAAGGCTTTTATT  492

seq1  CAGTCTGTAAAAGTAGGAAAACATTCCCAATATTATACTCACAAAGGCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGTAAAAGTAGGAAAACATTCCCAATATTATACTCACAAAGGCTG  542

seq1  CATACGTAAATATGAAATGTCACTTCTTAGATGGACTTTCACCCAGTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACGTAAATATGAAATGTCACTTCTTAGATGGACTTTCACCCAGTAAA  592

seq1  GCTAGAAACAAAAAGAACAGAGCTGAGTATTGATACATTTTGTACAGTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAACAAAAAGAACAGAGCTGAGTATTGATACATTTTGTACAGTGA  642

seq1  TTCCTCTTTCAGACTCTACGAAGGGCTTGTTGTGTCAACATCTAGATTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTTCAGACTCTACGAAGGGCTTGTTGTGTCAACATCTAGATTAG  692

seq1  AACCATAGGAGCAGAAAGGACAAAGCCAATCTTCTGGCTACCTGCACAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAGGAGCAGAAAGGACAAAGCCAATCTTCTGGCTACCTGCACAGG  742

seq1  GAGTAAGAGAAAGAGCAAGTATGTACTCCTTAGTCAGCAATGACCTTGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGAGAAAGAGCAAGTATGTACTCCTTAGTCAGCAATGACCTTGCC  792

seq1  CAAAGTCCTTGGACTTCAGTATGTTTCATAAATGCCTAGGAAGTGATCCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCCTTGGACTTCAGTATGTTTCATAAATGCCTAGGAAGTGATCCC  842

seq1  TAAACTTTAATCTCTATAAAGACAAGCCCCTATGCTATAAAAATTAGCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTAATCTCTATAAAGACAAGCCCCTATGCTATAAAAATTAGCTT  892

seq1  ATGGCTTTATGCGAAGCTTGCCAAAATCTATAGAAATATGTATGGACTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTTATGCGAAGCTTGCCAAAATCTATAGAAATATGTATGGACTTA  942

seq1  ATTTTTAAAAATATTCATTTAAGTATATTAAGTACACTGTAGTTATTGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAAATATTCATTTAAGTATATTAAGTACACTGTAGTTATTGAC  992

seq1  TTCAGACACATCAGAAGGTGGCATCGGATTCCATTACAAAAGGTTGTGAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACACATCAGAAGGTGGCATCGGATTCCATTACAAAAGGTTGTGAG  1042

seq1  CTACCCAGTGGTTACTTGGAATTC  1073
      ||||||||||||||||||||||||
seq2  CTACCCAGTGGTTACTTGGAATTC  1066

seq1: chr10_50725017_50726068
seq2: B6Ng01-113K03.g_78_1122

seq1  CTTAGATGTACATGTATGCACCACATACTTGCTGCATGTTTGCAGAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATGTACATGTATGCACCACATACTTGCTGCATGTTTGCAGAGTCA  50

seq1  GAATAGGGTATGGAAAGTTTTGGGCTGCCATGTGGTTTTGAGAACTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGGTATGGAAAGTTTTGGGCTGCCATGTGGTTTTGAGAACTGAAC  100

seq1  TCTGGTTCTGGGCAAGAGCAGCACCAGTCATCAAACAAGAGGACACTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTCTGGGCAAGAGCAGCACCAGTCATCAAACAAGAGGACACTGAG  150

seq1  TCATCTCCCTAGCTGCTTTATTGTTACATTTCTTCTAAGGTATTTACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCCCTAGCTGCTTTATTGTTACATTTCTTCTAAGGTATTTACTAA  200

seq1  GATCACATAGATTTCTTTTCTGTCTTGTCTTTTCCTGTATGTTTGTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACATAGATTTCTTTTCTGTCTTGTCTTTTCCTGTATGTTTGTTTAA  250

seq1  TTTGGGCTTAACACAGAAAGTACTCTTTTTTGCATAGTTAACTTACATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTTAACACAGAAAGTACTCTTTTTTGCATAGTTAACTTACATTA  300

seq1  TTCATATCTGTTAAAACATTATGATTTCAAACACTTTCAATCACTGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATCTGTTAAAACATTATGATTTCAAACACTTTCAATCACTGTGTT  350

seq1  GATTTTTCTTTGTAAACAGCAGTGCTTATTTCACAATTTTAAAATGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCTTTGTAAACAGCAGTGCTTATTTCACAATTTTAAAATGTATT  400

seq1  TCCTTAATGTTCTTAAAATTATAAATTCTTTTAGATTATTGGTGGATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAATGTTCTTAAAATTATAAATTCTTTTAGATTATTGGTGGATGCT  450

seq1  TAAATTGTATGAAATGCCTTTTGGCAAACAGAATAGTTATTTTTTTAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTATGAAATGCCTTTTGGCAAACAGAATAGTTATTTTTTTAAAC  500

seq1  TTGAAATATTTTTTTCCTAAGCTGAAACATTCTTACTTTGTGACATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATTTTTTTCCTAAGCTGAAACATTCTTACTTTGTGACATATAT  550

seq1  ATACATATATATATATAAATATTAGGAGCTTTGGATACATACACACTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATATATATATAAATATTAGGAGCTTTGGATACATACACACTCTC  600

seq1  ACACATATATATGCATGCACACAATATATGTATATTTCTACATTGCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATATATGCATGCACACAATATATGTATATTTCTACATTGCTGGA  650

seq1  TATAAAGTTTAACTGTATATTTTCCATTACATTGTTAGTTGTAACTCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTTTAACTGTATATTTTCCATTACATTGTTAGTTGTAACTCAGT  700

seq1  TCCTTGTTGTTGACTTTTTTCATATAGACAGGCACGTTATACCTACCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTGTTGACTTTTTTCATATAGACAGGCACGTTATACCTACCATT  750

seq1  CAGTCACCAAGGCATCACATCACAGATAAGGCCAGGAAACAGTAGATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACCAAGGCATCACATCACAGATAAGGCCAGGAAACAGTAGATCCT  800

seq1  AAATTTGTGCCTATATTTGTTCTTGGCAGACCTGAATTTCAGTTCCTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTGCCTATATTTGTTCTTGGCAGACCTGAATTTCAGTTCCTTAC  850

seq1  TGAGAAGTCACTTATTACACATGTTTGTTTATTTGTGAATTGTATTACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTCACTTATTACACATGTTTGTTTATTTGTGAATTGTATTACAC  900

seq1  TTTCAAAATTATTAATAGAATATAGAAAGTATTTACTGTTGGCTCATTTG  950
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTC-AAATTATTAATAGAATATAGAAAGTA-TTACTGTTGGCTCATTTG  948

seq1  CTTTAAGTAGAAAAAAAAAACAGTTTGAATTTTCTTTACCAGAAAATTAT  1000
      |||| ||||||||||||||||||||||||||||||||| |||||||||| 
seq2  CTTT-AGTAGAAAAAAAAAACAGTTTGAATTTTCTTTA-CAGAAAATTAA  996

seq1  TGTTAGAAAAGCAAGCAAAGAATTTTTAGAACCTCTGCAATCCTGTAATA  1050
      || ||| |||||||||||||| |||| ||||||||||| |||   |||||
seq2  TG-TAG-AAAGCAAGCAAAGATTTTTAAGAACCTCTGC-ATCTGTTAATA  1043

seq1  AA  1052
      ||
seq2  AA  1045