BAC Information

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BAC

Clone NameB6Ng01-114F21
Chromosome10 (Build37)
Map Location 98,822,795 - 98,968,202
singlet/doubletdoublet
Overlap geneGad1-ps, LOC100042232
Upstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222
Downstream geneLOC667502, Csl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114F21.bB6Ng01-114F21.g
ACCDH919903DH919904
length1,129168
definitionDH919903|Mus musculus domesticus DNA, BAC clone: B6Ng01-114F21, 5' end.DH919904|Mus musculus domesticus DNA, BAC clone: B6Ng01-114F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,967,055 - 98,968,202)(98,822,795 - 98,822,966)
sequence
gaattctccaccttctcccaaccccacccccactccaaccatctattatc
cgattagtctcaagcacactttgaaacctccacttaaacgataaaaggca
taattgagcacctatcattgcagactaggttaagtcccccactatctatt
ttcatagcatgatgaacttcccctattgccttgtctaatatattgtccat
cactgttttcttagggttgattttgtatatgattgagtctgtctctttta
gtagattataaacgctataggatgaaagtcctctgccctgtctaaatgag
ctgctgtgtctgtagtaagttagaaaacaataataaccacaagcttttga
gggccatatttcatttcatccttacaataactatgcgggaaactgttaat
gctaccctttggtaggtgagaaaagcaagtgtttcatggaatcatagaag
agaggttacttgtccaggtggtgtaagacaaggctggtgtatcacttaaa
gtctgtgctcagtttttctaagcagtgctgcctctccaattacttaaaag
ttgactcttcttagaaatgaagaatggccatcataatcactctaattttt
tttccttaagcataattgcctactaagaaatctccctggctcttttgttc
tttgtccattctaccaagtagagacattgctttggtatttcctgggagtt
cttttggtttagcaaaaaaaatagttgctatcactcccgttcaaggcaaa
gcccagtaaaaacttccgggaaagtcccaataagtaaacacatatttcac
atacattgataaaaacacacggagaaaggaattgggtagattaaagtaaa
ttaggtcaaaaagaagtggaaagagacaagtacaggaacaaaagaaacag
agagatatacaggaagagagagataaatgcaagggcatgggaaagtacgg
aaaagcagcagacaccccaagtcctacagtgtcgattcaaacgggaaact
gcttagtctgtgaataaaaaccatatgtttcaagtgtacatcacacatca
ggctgctgttattgttctgactgtgatgatggttcatgcaaagaatttat
aatgtttaatcaaacatacgttttatact
agttatcctttatgttaataactccctagattcacagccaaacatccatt
gacttgctcagttactattaacaaatggctagtgtctgaaaaggctttgc
ctactggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98967055_98968202
seq2: B6Ng01-114F21.b_43_1171 (reverse)

seq1  AGTATAAAACGTATGTTTGATTAAACAATTATAAATTCTTTGCATGAACC  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGTATAAAACGTATGTTTGATTAAAC-ATTATAAATTCTTTGCATGAACC  49

seq1  ATCCATCCACAGTCAGAACAATAACCAGCAGCCCTGATTGTTGGTGATTG  100
      || ||| ||||||||||||||||| |||||| ||||| |||  |||| ||
seq2  AT-CAT-CACAGTCAGAACAATAA-CAGCAG-CCTGA-TGT--GTGA-TG  91

seq1  TACACTTGAGACAATATGGTTTTTATTCACAGACTAAGCAAGTTTTCCCG  150
      ||||||||| || |||||||||||||||||||||||||||   |||||||
seq2  TACACTTGAAAC-ATATGGTTTTTATTCACAGACTAAGCA--GTTTCCCG  138

seq1  TTTGGAATCGACACCTGTAGGACTTTGGGGTGTCTGCTGCTTTTCCGTAC  200
      ||| ||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  TTT-GAATCGACA-CTGTAGGAC-TTGGGGTGTCTGCTGCTTTTCCGTAC  185

seq1  TTTCCCATGCCCTTGCATTTATCTCTTCTCTTTCCTGTATTATCTCTTCT  250
      ||||||||||||||||||||||||| |||| |||||||| |||||| |||
seq2  TTTCCCATGCCCTTGCATTTATCTC-TCTC-TTCCTGTA-TATCTC-TCT  231

seq1  GTTTCTTTTGTTCCTGTACTTGTCTCTTTCCACTTCTTTTTGACCTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTGTTCCTGTACTTGTCTCTTTCCACTTCTTTTTGACCTAATT  281

seq1  TACTTTAATCTACCCAATTCCTTTCTCCGTGTGTTTTTATCAATGTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAATCTACCCAATTCCTTTCTCCGTGTGTTTTTATCAATGTATGT  331

seq1  GAAATATGTGTTTACTTATTGGGACTTTCCCGGAAGTTTTTACTGGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATGTGTTTACTTATTGGGACTTTCCCGGAAGTTTTTACTGGGCTT  381

seq1  TGCCTTGAACGGGAGTGATAGCAACTATTTTTTTTGCTAAACCAAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGAACGGGAGTGATAGCAACTATTTTTTTTGCTAAACCAAAAGAA  431

seq1  CTCCCAGGAAATACCAAAGCAATGTCTCTACTTGGTAGAATGGACAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGGAAATACCAAAGCAATGTCTCTACTTGGTAGAATGGACAAAGA  481

seq1  ACAAAAGAGCCAGGGAGATTTCTTAGTAGGCAATTATGCTTAAGGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGAGCCAGGGAGATTTCTTAGTAGGCAATTATGCTTAAGGAAAAA  531

seq1  AAATTAGAGTGATTATGATGGCCATTCTTCATTTCTAAGAAGAGTCAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGAGTGATTATGATGGCCATTCTTCATTTCTAAGAAGAGTCAACT  581

seq1  TTTAAGTAATTGGAGAGGCAGCACTGCTTAGAAAAACTGAGCACAGACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTAATTGGAGAGGCAGCACTGCTTAGAAAAACTGAGCACAGACTT  631

seq1  TAAGTGATACACCAGCCTTGTCTTACACCACCTGGACAAGTAACCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGATACACCAGCCTTGTCTTACACCACCTGGACAAGTAACCTCTCT  681

seq1  TCTATGATTCCATGAAACACTTGCTTTTCTCACCTACCAAAGGGTAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGATTCCATGAAACACTTGCTTTTCTCACCTACCAAAGGGTAGCAT  731

seq1  TAACAGTTTCCCGCATAGTTATTGTAAGGATGAAATGAAATATGGCCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTTTCCCGCATAGTTATTGTAAGGATGAAATGAAATATGGCCCTC  781

seq1  AAAAGCTTGTGGTTATTATTGTTTTCTAACTTACTACAGACACAGCAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTGTGGTTATTATTGTTTTCTAACTTACTACAGACACAGCAGCT  831

seq1  CATTTAGACAGGGCAGAGGACTTTCATCCTATAGCGTTTATAATCTACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGACAGGGCAGAGGACTTTCATCCTATAGCGTTTATAATCTACTA  881

seq1  AAAGAGACAGACTCAATCATATACAAAATCAACCCTAAGAAAACAGTGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGACAGACTCAATCATATACAAAATCAACCCTAAGAAAACAGTGAT  931

seq1  GGACAATATATTAGACAAGGCAATAGGGGAAGTTCATCATGCTATGAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATATATTAGACAAGGCAATAGGGGAAGTTCATCATGCTATGAAAA  981

seq1  TAGATAGTGGGGGACTTAACCTAGTCTGCAATGATAGGTGCTCAATTATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGTGGGGGACTTAACCTAGTCTGCAATGATAGGTGCTCAATTATG  1031

seq1  CCTTTTATCGTTTAAGTGGAGGTTTCAAAGTGTGCTTGAGACTAATCGGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATCGTTTAAGTGGAGGTTTCAAAGTGTGCTTGAGACTAATCGGA  1081

seq1  TAATAGATGGTTGGAGTGGGGGTGGGGTTGGGAGAAGGTGGAGAATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGATGGTTGGAGTGGGGGTGGGGTTGGGAGAAGGTGGAGAATTC  1129

seq1: chr10_98822795_98822966
seq2: B6Ng01-114F21.g_72_239

seq1  AGTTATCCTTTATGTTAATAACTCCCTAGATTCACAGCCAAACATCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCCTTTATGTTAATAACTCCCTAGATTCACAGCCAAACATCCATT  50

seq1  GACTTGCTCAGTTACTATTAACAAATGGCTAGTGTCTGAAAAGGCTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCTCAGTTACTATTAACAAATGGCTAGTGTCTGAAAAGGCTTTGC  100

seq1  CTACTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  150

seq1  GTGTGTCTGGGTGTGTGTGTGT  172
      ||||||    ||||||||||||
seq2  GTGTGT----GTGTGTGTGTGT  168