BAC Information

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BAC

Clone NameB6Ng01-115A10
Chromosome10 (Build37)
Map Location 10,723,501 - 10,868,640
singlet/doubletdoublet
Overlap geneGrm1
Upstream geneLOC100039238, LOC665110, 9130014G24Rik, Rab32, EG382450
Downstream geneShprh, Fbxo30, Epm2a, EG666732, LOC100039343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115A10.bB6Ng01-115A10.g
ACCDH920396DH920397
length1,0001,002
definitionDH920396|Mus musculus domesticus DNA, BAC clone: B6Ng01-115A10, 5' end.DH920397|Mus musculus domesticus DNA, BAC clone: B6Ng01-115A10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,867,956 - 10,868,640)(10,723,501 - 10,724,506)
sequence
gaattctatcttcagtagacataaaagtctctcctctgaggatttcaata
gtgtgtttaccaagtgctttgtatgtccttcgaatttttttctgtggagt
aatttttttttttgtttgtttgtttggttgttttgtaatcaccagagcta
attccaggggaggaaaaggttcgcttgttatttggctttctggaaattcc
ctgttgtgagacatctgttcatgaaaatactgtgtcttaccacctagtag
atggtaaataatctaatgatagtacagacaggagaaccgacttattggac
acactcagatcttacacgtgaatccccacttttcatataactcagctgcc
ttgtttggaaacaatacaggtgtgttgtatcatgtctaagctaggcttgg
atccagtccatagtgataaatattgcaattaagaaaattttaattttttt
ttctggtttctgtgttgtggtccagtaagtatacatcatgtctaaacaga
gtataaatatcaaaatgtttaaatattttgactgaattctcagcacagta
cctttctcttgatagaggatttgctttgaagctgatggctgctcagtcaa
gctcctggctggcagaagaggaggcacctatagaaacgtgttaaaaataa
acacaagttctggtttgcaaagaaagagatcactactctatccgacaagg
ctgagccacacaatatgggtgctcagagctgaactcagatcttgtgcaag
agaagagtgatctcataacctctgagctcactctccgctatctccctaga
atgtatttcttaaacaaaaagatgtaacaaccaaagtgactccttgctcc
atggccatgaaaagaatatcaatctcactagacacctgcactgaagcttt
ggggtaactaggtacattaacctagaagcaataatttgaaataatgtata
tatttttaattttctgagcagtgtatctcaacatgagctcaaaatattcg

gaattccattttcaataatggactttaatttataaggagtagtgatttat
tcggcttgtggatctgcaatattcaagaatttagcaccagccatgttcta
gtaaggtccttaatgctgcttcaaaccacagaggaggacagaagggccaa
agggcaagaaggagccgaattcattctcaaatcagacccatgtttaatac
aacagggatctatttttaaggacaaaagccttgagacctaatgaactctt
agccagttacatctttccactctgccatattgagtgtaagtttctaaaac
acaagcatgggagaaatattcaagatatagcaaacctaatccttttttaa
gtcatattttctttattcttatagataacctctaatgttatacatttcat
acatgcatatgctttagtgaaatatcctacattctatcttctccaatttc
tctccatctttcttaccatttttccatcccaagttcatgtgctcttcttt
tatttttattttttaattttttattagatattttctttatttacatttca
aatgttataccctttcctagtttcccctccaaaaatcccctaacctctcc
cccctccccctgattcccaacccacccactcccatttctggtcctggcat
ttccctatactggggcctagagcctttacaggaccaagggtctctcctcc
cactgatgactgactaggccaatctttgctacatagataactagagccac
aagttccaccatgtgttttctttgattggtagtatagttccaaggaactc
tgagggtactggttagttcatattgatgttcctcctatggggcttcagtc
cccttcagctccctgggtatttctctggctccttcattggggatcttgtt
ctccggactgtggactgtgagtatccactctgcatttgccagcactggca
gagcctcgcagagacagctatcaggctctgtcagcaggctcttcttggca
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_10867956_10868640
seq2: B6Ng01-115A10.b_48_732 (reverse)

seq1  TAGTGATCTCTTTCTTTGCAAACCAGAACTTGTGTTTATTTTTAACACGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATCTCTTTCTTTGCAAACCAGAACTTGTGTTTATTTTTAACACGT  50

seq1  TTCTATAGGTGCCTCCTCTTCTGCCAGCCAGGAGCTTGACTGAGCAGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAGGTGCCTCCTCTTCTGCCAGCCAGGAGCTTGACTGAGCAGCCA  100

seq1  TCAGCTTCAAAGCAAATCCTCTATCAAGAGAAAGGTACTGTGCTGAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCAAAGCAAATCCTCTATCAAGAGAAAGGTACTGTGCTGAGAAT  150

seq1  TCAGTCAAAATATTTAAACATTTTGATATTTATACTCTGTTTAGACATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAAAATATTTAAACATTTTGATATTTATACTCTGTTTAGACATGA  200

seq1  TGTATACTTACTGGACCACAACACAGAAACCAGAAAAAAAAATTAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACTTACTGGACCACAACACAGAAACCAGAAAAAAAAATTAAAATT  250

seq1  TTCTTAATTGCAATATTTATCACTATGGACTGGATCCAAGCCTAGCTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATTGCAATATTTATCACTATGGACTGGATCCAAGCCTAGCTTAG  300

seq1  ACATGATACAACACACCTGTATTGTTTCCAAACAAGGCAGCTGAGTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATACAACACACCTGTATTGTTTCCAAACAAGGCAGCTGAGTTATA  350

seq1  TGAAAAGTGGGGATTCACGTGTAAGATCTGAGTGTGTCCAATAAGTCGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTGGGGATTCACGTGTAAGATCTGAGTGTGTCCAATAAGTCGGT  400

seq1  TCTCCTGTCTGTACTATCATTAGATTATTTACCATCTACTAGGTGGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGTCTGTACTATCATTAGATTATTTACCATCTACTAGGTGGTAAG  450

seq1  ACACAGTATTTTCATGAACAGATGTCTCACAACAGGGAATTTCCAGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTATTTTCATGAACAGATGTCTCACAACAGGGAATTTCCAGAAAG  500

seq1  CCAAATAACAAGCGAACCTTTTCCTCCCCTGGAATTAGCTCTGGTGATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAACAAGCGAACCTTTTCCTCCCCTGGAATTAGCTCTGGTGATTA  550

seq1  CAAAACAACCAAACAAACAAACAAAAAAAAAAATTACTCCACAGAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAACCAAACAAACAAACAAAAAAAAAAATTACTCCACAGAAAAAA  600

seq1  ATTCGAAGGACATACAAAGCACTTGGTAAACACACTATTGAAATCCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGAAGGACATACAAAGCACTTGGTAAACACACTATTGAAATCCTCAG  650

seq1  AGGAGAGACTTTTATGTCTACTGAAGATAGAATTC  685
      |||||||||||||||||||||||||||||||||||
seq2  AGGAGAGACTTTTATGTCTACTGAAGATAGAATTC  685

seq1: chr10_10723501_10724506
seq2: B6Ng01-115A10.g_69_1070

seq1  GAATTCCATTTTCAATAATGGACTTTAATTTATAAGGAGTAGTGATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTTCAATAATGGACTTTAATTTATAAGGAGTAGTGATTTAT  50

seq1  TCGGCTTGTGGATCTGCAATATTCAAGAATTTAGCACCAGCCATGTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTTGTGGATCTGCAATATTCAAGAATTTAGCACCAGCCATGTTCTA  100

seq1  GTAAGGTCCTTAATGCTGCTTCAAACCACAGAGGAGGACAGAAGGGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTCCTTAATGCTGCTTCAAACCACAGAGGAGGACAGAAGGGCCAA  150

seq1  AGGGCAAGAAGGAGCCGAATTCATTCTCAAATCAGACCCATGTTTAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAGAAGGAGCCGAATTCATTCTCAAATCAGACCCATGTTTAATAC  200

seq1  AACAGGGATCTATTTTTAAGGACAAAAGCCTTGAGACCTAATGAACTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGATCTATTTTTAAGGACAAAAGCCTTGAGACCTAATGAACTCTT  250

seq1  AGCCAGTTACATCTTTCCACTCTGCCATATTGAGTGTAAGTTTCTAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTTACATCTTTCCACTCTGCCATATTGAGTGTAAGTTTCTAAAAC  300

seq1  ACAAGCATGGGAGAAATATTCAAGATATAGCAAACCTAATCCTTTTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCATGGGAGAAATATTCAAGATATAGCAAACCTAATCCTTTTTTAA  350

seq1  GTCATATTTTCTTTATTCTTATAGATAACCTCTAATGTTATACATTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATTTTCTTTATTCTTATAGATAACCTCTAATGTTATACATTTCAT  400

seq1  ACATGCATATGCTTTAGTGAAATATCCTACATTCTATCTTCTCCAATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATATGCTTTAGTGAAATATCCTACATTCTATCTTCTCCAATTTC  450

seq1  TCTCCATCTTTCTTACCATTTTTCCATCCCAAGTTCATGTGCTCTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATCTTTCTTACCATTTTTCCATCCCAAGTTCATGTGCTCTTCTTT  500

seq1  TATTTTTATTTTTTAATTTTTTATTAGATATTTTCTTTATTTACATTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATTTTTTAATTTTTTATTAGATATTTTCTTTATTTACATTTCA  550

seq1  AATGTTATACCCTTTCCTAGTTTCCCCTCCAAAAATCCCCTAACCTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATACCCTTTCCTAGTTTCCCCTCCAAAAATCCCCTAACCTCTCC  600

seq1  CCCCTCCCCCTGATTCCCAACCCACCCACTCCCATTTCTGGTCCTGGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCCCTGATTCCCAACCCACCCACTCCCATTTCTGGTCCTGGCAT  650

seq1  TTCCCTATACTGGGGCCTAGAGCCTTTACAGGACCAAGGGTCTCTCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTATACTGGGGCCTAGAGCCTTTACAGGACCAAGGGTCTCTCCTCC  700

seq1  CACTGATGACTGACTAGGCCAATCTTTGCTACATAGATAACTAGAGCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATGACTGACTAGGCCAATCTTTGCTACATAGATAACTAGAGCCAC  750

seq1  AAGTTCCACCATGTGTTTTCTTTGATTGGTAGTATAGTTCCAAGGAACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCACCATGTGTTTTCTTTGATTGGTAGTATAGTTCCAAGGAACTC  800

seq1  TGAGGGTACTGGTTAGTTCATATTGATGTTCCTCCTATGGGGCTTCAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTACTGGTTAGTTCATATTGATGTTCCTCCTATGGGGCTTCAGTC  850

seq1  CCCTTCAGCTCCCTGGGTATTTCTCTGGCTCCTTCATTGGGGATCTTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAGCTCCCTGGGTATTTCTCTGGCTCCTTCATTGGGGATCTTGTT  900

seq1  CTCCGGACTGTGGACTGTGAGTATCCACTTCTGCATTTGCCAGGCACTGG  950
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  CTCCGGACTGTGGACTGTGAGTATCCAC-TCTGCATTTGCCA-GCACTGG  948

seq1  CAGAGCCTCGCAGAAGACAGCTATCAGGCTCCTGTCAGCAGGCTCTTCTT  1000
      ||||||||||||| |||||||||||||||| |||||||||||||||||||
seq2  CAGAGCCTCGCAG-AGACAGCTATCAGGCT-CTGTCAGCAGGCTCTTCTT  996

seq1  GGCATC  1006
      ||||||
seq2  GGCATC  1002