BAC Information

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BAC

Clone NameB6Ng01-116F16
Chromosome10 (Build37)
Map Location 25,448,229 - 25,449,461
singlet/doubletsinglet
Overlap genenone
Upstream geneEnpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik, EG667513
Downstream geneLOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116F16.bB6Ng01-116F16.g
ACCDH921373DH921374
length1,2221,199
definitionDH921373|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F16, 5' end.DH921374|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttattcgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaacattggagtttca
ttaggtcccatttgtcaattctcaatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgtttatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcaggacttgaagtttttattttac
agatctttcacctccttagtagagtcacgccaagatattttatactattg
tgactattgagaaggtgttgtttccttaatttctttctcagcctgttatt
cttgtatagagaaagccatgactggtttgagttttttatatccagctact
tcaccgagctgtttatcagtttaggagtctctgtgaattttaagggtcac
tataatctatcaatcatctggcaaagtgaatattggacttccttccaatt
gatccctgaatctttgtgcatgctcgctatactcatggtcaatgtggaaa
gagtgaggagaacatgcgggac
gaattcaaagccagcctggattgcatatggaaaactgcctaaggggaaaa
cactcgtgaaatggcctaactgggttggatctattaagagagagagatgg
tagcaagaacagggctaagacaggcttcatgagcctatcctgattttcag
gcagaatgagggaaaaggcattatctgccttaagactgaaactgataatg
taggcgaacacaaacaagagggaacacgcatgagtgcctgaggactgtcc
ctgctggtacgcagggtgagtgtcaggcattaggggcaaaagcaaaggac
tgcagtcttcagaggacagaaaactgtgaagtcctactgtagagtgtggt
gtattagacaaattagcctcctcatgggggttctaccatgagttgggtgg
ttggttacaggaaagacttggaaaataaggtaccaaatgaggatgatgtc
acaggaaaaaacaaagaaaagtgagcaggtcccttggtaggagatgaaca
gcaggtggcccataaggggcaggtgtgatgaaggagagagaaaccaggtg
tggttcattagcagttgccactggaagcctatttaaaccaattttagagg
aatgtcttggctttcctgagcatctgtgaaataagggaggtagattgttg
aggtttctcctcccacagctgtactgaatgctggtcccctgaagctggct
tacatttagatttatcatggcctttttctgcacttctgctagcttgctgt
aattgtctattcacacattttcttgtcagaataagaagagttgtaagcct
tggaagacagtgctggatgggagctggtgttaaacctgaccacaactacc
tttctgggtccagtgttcatcttctaggcagcacactgatatttgaataa
gtgagggaagaaaggagccctatacagttccccacatatatttagacaac
ttacctactctaaatcttcgatgtaatcctgaggattctacatacatgaa
agcaactgagaccctactaaggatttccctttctagttaatttctacctg
gtggtctgtagaggatatagtacagtctgagtttgtattctaaggtttga
agatcaaatggctctttcaactgttccctctttgtatcacgagtccgacc
tcatcctccgatgggatggaagagaaaaaggatctgcattagttctcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_25448229_25449461
seq2: B6Ng01-116F16.g_70_1268 (reverse)

seq1  TTGAGAACTAATTGCAGAATCCTTTTTCTTCTCTCCCAATCTCACATCTG  50
      ||||||||||| ||||| |||||||   |||||| |||   || |||| |
seq2  TTGAGAACTAA-TGCAG-ATCCTTT---TTCTCTTCCA---TCCCATC-G  41

seq1  GAGGGATGAGGCTGGGGGCTGCTGAATCAAAGAGGGGACAATTTTGAAAG  100
      || ||||||||    || ||  |||  ||||||||| |||   |||||||
seq2  GA-GGATGAGG--TCGGACTCGTGATACAAAGAGGGAACA--GTTGAAAG  86

seq1  AGCCCATTTTTTGGATCCTTCAAACCTTAGAATACAAACCTCAGACTGTG  150
      || ||||||    ||| ||||||||||||||||||||| |||||||||| 
seq2  AG-CCATTT----GAT-CTTCAAACCTTAGAATACAAA-CTCAGACTGT-  128

seq1  ACTATATCCTCTTAACAGACCACAGGGTAGATATTTAAACTAGGAAAGGG  200
      ||||||||||||  |||||||||  |||||| |||  ||||| |||||||
seq2  ACTATATCCTCT--ACAGACCACCAGGTAGAAATT--AACTA-GAAAGGG  173

seq1  AAATCCTTAGTAGGGTTCTCTAGTTGCTTTTCCTGTATGTAGGAATCCTC  250
      ||||||||||||||| |||| |||||| |||| |||||||| ||||||||
seq2  AAATCCTTAGTAGGG-TCTC-AGTTGC-TTTCATGTATGTA-GAATCCTC  219

seq1  AGGATTTACATCGAAGATTTAGAGTAGGTAAGTTGTCTAAATATATGTGG  300
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGA-TTACATCGAAGATTTAGAGTAGGTAAGTTGTCTAAATATATGTGG  268

seq1  GGAACTGTATAGGGCTCCTTTCCTTCCCTCACTTATTCAAATATCAGTGT  350
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  GGAACTGTATAGGGCTCCTTT-CTTCCCTCACTTATTCAAATATCAGTG-  316

seq1  TGCTGCCTAGAAGATGAACACTGGACCCAGAAAGGTAGTTGTGGTCAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCTGCCTAGAAGATGAACACTGGACCCAGAAAGGTAGTTGTGGTCAGG-  365

seq1  TTTAACACCAGCTCCCATCCAGCACTGTCTTCCAAGGCTTACAACTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACACCAGCTCCCATCCAGCACTGTCTTCCAAGGCTTACAACTCTTC  415

seq1  TTATTCTGACAAG-AAATGTGTGAATAGACAATTACAGCAAGCTAGCAGA  499
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTATTCTGACAAGAAAATGTGTGAATAGACAATTACAGCAAGCTAGCAGA  465

seq1  AGTGCAGAAAAAGGCCATGATAAATCTAAATGTAAGCCAGCTTCAGGGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGAAAAAGGCCATGATAAATCTAAATGTAAGCCAGCTTCAGGGGA  515

seq1  CCAGCATTCAGTACAGCTGTGGGAGGAGAAACCTCAACAATCTACCTCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATTCAGTACAGCTGTGGGAGGAGAAACCTCAACAATCTACCTCCC  565

seq1  TTATTTCACAGATGCTCAGGAAAGCCAAGACATTCCTCTAAAATTGGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCACAGATGCTCAGGAAAGCCAAGACATTCCTCTAAAATTGGTTT  615

seq1  AAATAGGCTTCCAGTGGCAACTGCTAATGAACCACACCTGGTTTCTCTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGCTTCCAGTGGCAACTGCTAATGAACCACACCTGGTTTCTCTCT  665

seq1  CCTTCATCACACCTGCCCCTTATGGGCCACCTGCTGTTCATCTCCTACCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATCACACCTGCCCCTTATGGGCCACCTGCTGTTCATCTCCTACCA  715

seq1  AGGGACCTGCTCACTTTTCTTTGTTTTTTCCTGTGACATCATCCTCATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCTGCTCACTTTTCTTTGTTTTTTCCTGTGACATCATCCTCATTT  765

seq1  GGTACCTTATTTTCCAAGTCTTTCCTGTAACCAACCACCCAACTCATGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTTATTTTCCAAGTCTTTCCTGTAACCAACCACCCAACTCATGGT  815

seq1  AGAACCCCCATGAGGAGGCTAATTTGTCTAATACACCACACTCTACAGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCCCATGAGGAGGCTAATTTGTCTAATACACCACACTCTACAGTA  865

seq1  GGACTTCACAGTTTTCTGTCCTCTGAAGACTGCAGTCCTTTGCTTTTGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCACAGTTTTCTGTCCTCTGAAGACTGCAGTCCTTTGCTTTTGCC  915

seq1  CCTAATGCCTGACACTCACCCTGCGTACCAGCAGGGACAGTCCTCAGGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGCCTGACACTCACCCTGCGTACCAGCAGGGACAGTCCTCAGGCA  965

seq1  CTCATGCGTGTTCCCTCTTGTTTGTGTTCGCCTACATTATCAGTTTCAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCGTGTTCCCTCTTGTTTGTGTTCGCCTACATTATCAGTTTCAGT  1015

seq1  CTTAAGGCAGATAATGCCTTTTCCCTCATTCTGCCTGAAAATCAGGATAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGCAGATAATGCCTTTTCCCTCATTCTGCCTGAAAATCAGGATAG  1065

seq1  GCTCATGAAGCCTGTCTTAGCCCTGTTCTTGCTACCATCTCTCTCTCTTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGAAGCCTGTCTTAGCCCTGTTCTTGCTACCATCTCTCTCTCTTA  1115

seq1  ATAGATCCAACCCAGTTAGGCCATTTCACGAGTGTTTTCCCCTTAGGCAG  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCCAACCCAGTTAGGCCATTTCACGAGTGTTTTCCCCTTAGGCAG  1165

seq1  TTTTCCATATGCAATCCAGGCTGGCTTTGAATTC  1233
      ||||||||||||||||||||||||||||||||||
seq2  TTTTCCATATGCAATCCAGGCTGGCTTTGAATTC  1199