BAC Information

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BAC

Clone NameB6Ng01-117A11
Chromosome10 (Build37)3 (Build37)
Map Location 104,053,971 - 104,054,36381,231,885 - 81,232,103
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117A11.bB6Ng01-117A11.g
ACCDH921873DH921874
length1,024219
definitionDH921873|Mus musculus domesticus DNA, BAC clone: B6Ng01-117A11, 5' end.DH921874|Mus musculus domesticus DNA, BAC clone: B6Ng01-117A11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,971 - 104,054,363)(81,231,885 - 81,232,103)
sequence
gaattctcacctgaggaatgctgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcattagggaaatgcaaatcaaaacatccctgagat
tccatctcacagcagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacactcctccattattggtg
ggatttcaagcttgtacaaccactctggaaatcagtctggcggttcctcc
aaaaattggacatagtactactgaaggatcccacaatacctctcctggac
atatatccagaagttgttcgaaccagtaagaaggacacatgctccactat
gttcatagaagccttatttataatagccagaagctggaaagaatcatttg
tcaattcttgatcttgcagcacaagccattgctgttctgtttaggaaatt
ttcctctgtgtccatatctttggggcttttcctcactttctcctctataa
atttaagtgtctctggttttttgtggaggtctctgatccacttagacttg
agctttgtacaaggagataagaatggatcaattcgcattcttctacatga
taactgacagttgtgccaacaccgttttttgaaatgctgtcttttttcca
ctggatggttttcactcccttgtgaaaaatcaagtgaccatagatgtgtg
gattcatttctgggtcctcaattctattccattgatctacctgtggctgt
accagtaccaagcagtttttatcacaattgctctttagtacagcttaaga
tcacgcatggtgattccaccagaggttcttttatggttgagaatagtttt
tgctaacctaggttttttattattccagatgaatttgcaaattgcccttt
ctaactcagtgaagaattgagttggaattttgatggggattgcattgatt
ctgtagattgcttttggcaggatagctattttgactatattaatcctagc
atccatgagcatgggagatatttc
catatcctactactaagttgcttgctcatttatcagtgatagaattgtcc
ctagtgcttaaatagtaggtgcatcctaaatagtaagctttcaataaatg
ttcatttaattgatgaagctagagtttcacttgtggttccattaagtcct
taggcagtatcattcctaaggaaagtaagaaagccaggcacgtgtgtgtg
tgtgtggtggtggtggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053971_104054363
seq2: B6Ng01-117A11.b_45_437 (reverse)

seq1  TTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAATATAGTGG  50
      |||||||||||| ||||||||||||||||||||| ||||||| |||||||
seq2  TTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTTCTATGAACATAGTGG  50

seq1  AGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATATGCCCAGA  100
      |||||||||||||||||| |||| |  || |||||||||||||| |||| 
seq2  AGCATGTGTCCTTCTTACTGGTTCGAACAACTTCTGGATATATGTCCAGG  100

seq1  AGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGACGAA  150
      ||||||||||  ||||||| | ||||||||||||||||||||  || |||
seq2  AGAGGTATTGTGGGATCCTTCAGTAGTACTATGTCCAATTTTTGGAGGAA  150

seq1  CCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAAC  200
      ||||||||| |||||||||||||||||||||||| || ||||||||||| 
seq2  CCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGAAATCCCACCAAT  200

seq1  AATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCA  250
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATGGAGGAGTGTTCCTCTTTCTCCACATCCTCTCCAGCATCTGCTGTCA  250

seq1  CCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAG  300
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  CCTGAATTTTTGATCTTAGCCATTCTGACTGCTGTGAGATGGAATCTCAG  300

seq1  GGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTT  350
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGATGTTTTGATTTGCATTTCCCTAATGATTAAGGATGTTGAACATTTTT  350

seq1  TCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  393
      ||||||||||||| ||||||| | |||||||||||||||||||
seq2  TCAGGTGCTTCTCAGCCATTCAGCATTCCTCAGGTGAGAATTC  393

seq1: chr3_81231885_81232103
seq2: B6Ng01-117A11.g_72_290 (reverse)

seq1  CCACCACCACCACCACACACACACACACGTGCCTGGCTTTCTTACTTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCACCACCACACACACACACACGTGCCTGGCTTTCTTACTTTCC  50

seq1  TTAGGAATGATACTGCCTAAGGACTTAATGGAACCACAAGTGAAACTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAATGATACTGCCTAAGGACTTAATGGAACCACAAGTGAAACTCTA  100

seq1  GCTTCATCAATTAAATGAACATTTATTGAAAGCTTACTATTTAGGATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATCAATTAAATGAACATTTATTGAAAGCTTACTATTTAGGATGCA  150

seq1  CCTACTATTTAAGCACTAGGGACAATTCTATCACTGATAAATGAGCAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTATTTAAGCACTAGGGACAATTCTATCACTGATAAATGAGCAAGC  200

seq1  AACTTAGTAGTAGGATATG  219
      |||||||||||||||||||
seq2  AACTTAGTAGTAGGATATG  219