BAC Information

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BAC

Clone NameB6Ng01-117D22
Chromosome10 (Build37)
Map Location 101,107,121 - 101,302,156
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117D22.bB6Ng01-117D22.g
ACCDH922032DH922033
length1,0761,107
definitionDH922032|Mus musculus domesticus DNA, BAC clone: B6Ng01-117D22, 5' end.DH922033|Mus musculus domesticus DNA, BAC clone: B6Ng01-117D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,301,069 - 101,302,156)(101,107,121 - 101,108,233)
sequence
gaattcactcaagttgctgtacaatttttcagttattttatttctttaat
gaagcatttaaattgataaggttctggctgtatagaataactggatttgg
agatattgattagattcaaaattaaagacaaaaaaaagaacaaaaataat
ccattaactagataagttattaacttataacattaaattcattattagtt
aaaataataaagtctaaacttttatttaaaccagtgactattaagtatgt
tgcctgacttagaggttatatgcacatgattcctccttttttttaattta
aaaataatacacctcaatttctttcccaaaattacattttttaaaaacag
cacagttaaaataaatcagtatattttcaaaaagcatattacacaatgtt
tttagcttattaacctatttttcaacaacactgtaaaatgggacctttaa
gttgtagcttagctctggtggcatgatccacataagtaattccagcgatg
aagactgataaactagtaggatacaaggatagtatcatttttgacctgtg
ctacatagttaaattttgtcttagaaaccaaaccaataccactctgaagg
caaactatgcagtgtttgaagtcaaaagcaaatcacagatcttaggatga
ttttctttcttttaacattcaatgactaagaataaatctttattatatat
tcaaatcaccaatgatataaattctctttagcacatgttattttccaggc
agccctgtagttctactgaactgtctatccacatttaggaaaatattata
tttgcctgcactgtttttattttcttaataacttttgacgtttcattact
tctgcctttcaaaagtaaatttatagaaaattatctagtttaggtgaact
gttgccttattaattttaacttttcacaggatataatacattctggtgtg
taagttatgacaaattacattatgaaagtgacaaattatacatactgaaa
gtggatatgtataatatatcatagaaaagactcaaacattttctgggaaa
ttgatttagcacccacaactcttttt
gaattctgaatgaggtgagttgatatgtcctttccattttgatttggatt
tctctcatttttaatacagatagatatgttttttttctgagacagagttt
ctctgtgtagccctggctgttctggaactaactttgtagaccaggctggc
ctcggactcagaaatctgcctgtctctgcttcccaagtgctgggattaaa
ggtgtgcgccaccactttctcatttatatagacttttcataaatgtcttt
gagactagaattgattgaattccaatgtcgcacaacatattttcttcaag
ataatacaatattatttgacttaaatattcatttaatttttattagattt
tatattgaacaattatattttaaagtcaagaaaatataagaatgatttca
ataattaaagcaaattaacggtctttaataattacgttttaaagatagtg
ttcccaaatgtcaactcataacccatctttctttaaaattgactataacc
actggaattaactgaatagcataaattgagtttgcttacaagattttaat
ggatttttacaagatatcctgtagatctaatttccagattagcaaaacaa
ttgtttaattgtatattcattttctccttaaaattagccatcagtattat
ccttaatgacaagttatgctattctatcataaaggtaatatgatatagac
tttcatattgctttacctctctgtttcactccatattgagggaagtatca
gaaagatctgtcaaagcctaaacacttggttccctttattatcctcgaaa
atgtttttaaagttgaaaacattaatctgaagttattaatttcccttcaa
agtaaactagggaatacctacccttatgcagttacattgaagtattagtg
tgaattactttggccttttctagtctgggaagtatatcaataattacata
cagtaattggaaattttaatatgacacatatcataaaggatagaaaggaa
atgaaattaatacagcacttgtaatagcagagagagaaatgtgggctcct
tcttaattttctatacatctaaattatgttaatctgaaggatatcgagaa
aagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101301069_101302156
seq2: B6Ng01-117D22.b_45_1120 (reverse)

seq1  AAAAAGAGTTGTGTGTTTGCTAAATCAAATTTCCCAGAAAATGTTTGAAG  50
      ||||||||||||| |  ||||||||| |||||||||||||||||||| ||
seq2  AAAAAGAGTTGTGGG--TGCTAAATC-AATTTCCCAGAAAATGTTTG-AG  46

seq1  TCTTTTCTATTGATATATTTATACATATCCACTTTTCAAGTATGTTATAA  100
      ||||||||| ||||||| |||||||||||||||||   |||||| |||||
seq2  TCTTTTCTA-TGATATA-TTATACATATCCACTTT--CAGTATG-TATAA  91

seq1  TTTTGTCACTTTTCATAATGTAATTTTGTTCATAACTTACACACCAGAAT  150
       |||||||| ||||||||||||||||   |||||||||||||||||||||
seq2  -TTTGTCAC-TTTCATAATGTAATTT--GTCATAACTTACACACCAGAAT  137

seq1  GTATTATATCCTGTG-AAAGTTAAAATTAATAAGGCAACAGTTCACCTAA  199
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTATTATATCCTGTGAAAAGTTAAAATTAATAAGGCAACAGTTCACCTAA  187

seq1  ACTAGATAATTTTCTATAAATTTACTTTTGAAAGGCAGAAGTAATGAAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATAATTTTCTATAAATTTACTTTTGAAAGGCAGAAGTAATGAAAC  237

seq1  GTCAAAAGTTATTAAGAAAATAAAAACAGTGCAGGCAAATATAATATTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGTTATTAAGAAAATAAAAACAGTGCAGGCAAATATAATATTTT  287

seq1  CCTAAATGTGGATAGACAGTTCAGTAGAACTACAGGGCTGCCTGGAAAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATGTGGATAGACAGTTCAGTAGAACTACAGGGCTGCCTGGAAAAT  337

seq1  AACATGTGCTAAAGAGAATTTATATCATTGGTGATTTGAATATATAATAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTGCTAAAGAGAATTTATATCATTGGTGATTTGAATATATAATAA  387

seq1  AGATTTATTCTTAGTCATTGAATGTTAAAAGAAAGAAAATCATCCTAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATTCTTAGTCATTGAATGTTAAAAGAAAGAAAATCATCCTAAGA  437

seq1  TCTGTGATTTGCTTTTGACTTCAAACACTGCATAGTTTGCCTTCAGAGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGATTTGCTTTTGACTTCAAACACTGCATAGTTTGCCTTCAGAGTG  487

seq1  GTATTGGTTTGGTTTCTAAGACAAAATTTAACTATGTAGCACAGGTCAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGTTTGGTTTCTAAGACAAAATTTAACTATGTAGCACAGGTCAAA  537

seq1  AATGATACTATCCTTGTATCCTACTAGTTTATCAGTCTTCATCGCTGGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATACTATCCTTGTATCCTACTAGTTTATCAGTCTTCATCGCTGGAA  587

seq1  TTACTTATGTGGATCATGCCACCAGAGCTAAGCTACAACTTAAAGGTCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTATGTGGATCATGCCACCAGAGCTAAGCTACAACTTAAAGGTCCC  637

seq1  ATTTTACAGTGTTGTTGAAAAATAGGTTAATAAGCTAAAAACATTGTGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACAGTGTTGTTGAAAAATAGGTTAATAAGCTAAAAACATTGTGTA  687

seq1  ATATGCTTTTTGAAAATATACTGATTTATTTTAACTGTGCTGTTTTTAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTTTTTGAAAATATACTGATTTATTTTAACTGTGCTGTTTTTAAA  737

seq1  AAATGTAATTTTGGGAAAGAAATTGAGGTGTATTATTTTTAAATTAAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATTTTGGGAAAGAAATTGAGGTGTATTATTTTTAAATTAAAAA  787

seq1  AAAGGAGGAATCATGTGCATATAACCTCTAAGTCAGGCAACATACTTAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGGAATCATGTGCATATAACCTCTAAGTCAGGCAACATACTTAAT  837

seq1  AGTCACTGGTTTAAATAAAAGTTTAGACTTTATTATTTTAACTAATAATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGGTTTAAATAAAAGTTTAGACTTTATTATTTTAACTAATAATG  887

seq1  AATTTAATGTTATAAGTTAATAACTTATCTAGTTAATGGATTATTTTTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATGTTATAAGTTAATAACTTATCTAGTTAATGGATTATTTTTGT  937

seq1  TCTTTTTTTTGTCTTTAATTTTGAATCTAATCAATATCTCCAAATCCAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTGTCTTTAATTTTGAATCTAATCAATATCTCCAAATCCAGT  987

seq1  TATTCTATACAGCCAGAACCTTATCAATTTAAATGCTTCATTAAAGAAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTATACAGCCAGAACCTTATCAATTTAAATGCTTCATTAAAGAAAT  1037

seq1  AAAATAACTGAAAAATTGTACAGCAACTTGAGTGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTGAAAAATTGTACAGCAACTTGAGTGAATTC  1076

seq1: chr10_101107121_101108233
seq2: B6Ng01-117D22.g_67_1173

seq1  GAATTCTGAATGAGGTGAGTTGATATGTCCTTTCCATTTTGATTTGGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATGAGGTGAGTTGATATGTCCTTTCCATTTTGATTTGGATT  50

seq1  TCTCTCATTTTTAATACAGATAGATATGTTTTTTTTCTGAGACAGAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATTTTTAATACAGATAGATATGTTTTTTTTCTGAGACAGAGTTT  100

seq1  CTCTGTGTAGCCCTGGCTGTTCTGGAACTAACTTTGTAGACCAGGCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTAGCCCTGGCTGTTCTGGAACTAACTTTGTAGACCAGGCTGGC  150

seq1  CTCGGACTCAGAAATCTGCCTGTCTCTGCTTCCCAAGTGCTGGGATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGACTCAGAAATCTGCCTGTCTCTGCTTCCCAAGTGCTGGGATTAAA  200

seq1  GGTGTGCGCCACCACTTTCTCATTTATATAGACTTTTCATAAATGTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCGCCACCACTTTCTCATTTATATAGACTTTTCATAAATGTCTTT  250

seq1  GAGACTAGAATTGATTGAATTCCAATGTCGCACAACATATTTTCTTCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAGAATTGATTGAATTCCAATGTCGCACAACATATTTTCTTCAAG  300

seq1  ATAATACAATATTATTTGACTTAAATATTCATTTAATTTTTATTAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACAATATTATTTGACTTAAATATTCATTTAATTTTTATTAGATTT  350

seq1  TATATTGAACAATTATATTTTAAAGTCAAGAAAATATAAGAATGATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGAACAATTATATTTTAAAGTCAAGAAAATATAAGAATGATTTCA  400

seq1  ATAATTAAAGCAAATTAACGGTCTTTAATAATTACGTTTTAAAGATAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAAGCAAATTAACGGTCTTTAATAATTACGTTTTAAAGATAGTG  450

seq1  TTCCCAAATGTCAACTCATAACCCATCTTTCTTTAAAATTGACTATAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAATGTCAACTCATAACCCATCTTTCTTTAAAATTGACTATAACC  500

seq1  ACTGGAATTAACTGAATAGCATAAATTGAGTTTGCTTACAAGATTTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATTAACTGAATAGCATAAATTGAGTTTGCTTACAAGATTTTAAT  550

seq1  GGATTTTTACAAGATATCCTGTAGATCTAATTTCCAGATTAGCAAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTACAAGATATCCTGTAGATCTAATTTCCAGATTAGCAAAACAA  600

seq1  TTGTTTAATTGTATATTCATTTTCTCCTTAAAATTAGCCATCAGTATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAATTGTATATTCATTTTCTCCTTAAAATTAGCCATCAGTATTAT  650

seq1  CCTTAATGACAAGTTATGCTATTCTATCATAAAGGTAATATGATATAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATGACAAGTTATGCTATTCTATCATAAAGGTAATATGATATAGAC  700

seq1  TTTCATATTGCTTTACCTCTCTGTTTCACTCCATATTGAGGGAAGTATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATTGCTTTACCTCTCTGTTTCACTCCATATTGAGGGAAGTATCA  750

seq1  GAAAGATCTGTCAAAGCCTAAACACTTGGTTCCCTTTATTATCCTCGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATCTGTCAAAGCCTAAACACTTGGTTCCCTTTATTATCCTCGAAA  800

seq1  ATGTTTTTAAAGTTGAAAACATTAATCTGAAGTTATTAATTT-CCTTCAA  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATGTTTTTAAAGTTGAAAACATTAATCTGAAGTTATTAATTTCCCTTCAA  850

seq1  AGTAAACTAGGGAATACCTACCCTTATGCAGTTACATTGAAGTATTAGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACTAGGGAATACCTACCCTTATGCAGTTACATTGAAGTATTAGTG  900

seq1  TGAATTACTTTGGCCTTTTCTAGTCTGGGAAGTATATCAAATAATTACAT  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGAATTACTTTGGCCTTTTCTAGTCTGGGAAGTATATC-AATAATTACAT  949

seq1  ACAGTAATTGGAAATTTTAATATGACACATATCATAAAGGATAGAAAAGG  999
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACAGTAATTGGAAATTTTAATATGACACATATCATAAAGGATAG-AAAGG  998

seq1  AAATGAAATTAAATACAGCAC-TGTAATAAGCAGAGAGAGAAATTGTGGC  1048
      |||||||||| |||||||||| |||||| |||||||||||||||   |||
seq2  AAATGAAATT-AATACAGCACTTGTAAT-AGCAGAGAGAGAAATGTGGGC  1046

seq1  T-CTTCTTAATTTTCTATACATCTAATATTATG-TAATCTGAAAGGATAC  1096
      | |||||||||||||||||||||||| |||||| ||||||| ||||||| 
seq2  TCCTTCTTAATTTTCTATACATCTAA-ATTATGTTAATCTG-AAGGATAT  1094

seq1  AGAGAAGAGAAAAAAAA  1113
       ||||| ||||||    
seq2  CGAGAAAAGAAAA----  1107