BAC Information

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BAC

Clone NameB6Ng01-117F09
Chromosome10 (Build37)15 (Build37)
Map Location 118,912,933 - 118,914,1525,220,526 - 5,221,047
singlet/doubletsingletsinglet
Overlap geneGrip1
Upstream geneLOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1
Downstream geneHelb, Irak3, Tmbim4, 1190005P17Rik, Hmga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117F09.bB6Ng01-117F09.g
ACCDH922102DH922103
length1,185984
definitionDH922102|Mus musculus domesticus DNA, BAC clone: B6Ng01-117F09, 5' end.DH922103|Mus musculus domesticus DNA, BAC clone: B6Ng01-117F09, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(118,912,933 - 118,914,152)(5,220,526 - 5,221,047)
sequence
gaattcaaaagcatttctcagcctctgaactgaaagagctcatttagggc
ccactccacccacaggcaaggctgaccctgacggaacccttcgtaataac
acagtgagttctaatcctgagagatctgcctggtaactcagagcattcaa
ctcagaaagaaccaggaagacacagcagtgcttgcaggagagctaaggat
gcttccagctcctcccaggagcgctctccatcactcccgtcctgcgggac
ggtgctgtgtgcagtgagggcatctcttctcccagctaagtgtctttgca
gaaggcaggcatgctatgctcacctaagggactaatccagagaacttttc
ccctaaatttcacatgcaaatcgctcccatcttgagagggctgggatttg
tatgtacaaagtagcaaatcaggaattaagccgtttggatttgccactta
ttgatcttgcattattccccagggacgcattattcaatcattttcttgct
tgattttacattttatagaaaataagattgattgggaaaaaaaatcttac
agattttttctaagtggctgtacattcctcttataaatcttagcgataaa
aaaggctgctggggaaaatctcacaacttttgcaacaattgtaattacta
taaaattcctgtgacgtcccagggtgcttcccatatcctaattgctcttt
atctcactccgctgtgcttaagctgacaccagcttcttgtgattccctgg
tagtgactgtcacaatgtttccgttctagaaactaaacagactttaatcc
aaagtcaagcaatgtactattccgcatcaaggtagtataaagagagcaac
ccagccaggcagtggtggcacaagcctttagctcctgtacccaggaagca
gacagatctccgtgagttcaaggccaccctgatctacagagtggttctag
ggatatgctgaaaaccctgtctcaaaaatatgtatttaaaaaaaaaaaaa
aagcaacccagagtcaaagatcagatgcatagcctgagtacatgtttcca
tgcttttcattaattagtaataagggaggtggctgccaacaacatagcgt
tcccgagcaataactgagcaagactttgcctctcgccagacatcctcagt
gatgcatcatgtcctgtttcacatagtacggacaa
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaagaatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgattgtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttattgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctctcctcccgtttttc
ttgaaggcactcatagctatgagtttccctctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_118912933_118914152
seq2: B6Ng01-117F09.b_45_1229 (reverse)

seq1  TTGTCCGTTCACTGATGTTTGAAACAGGGACAATGGATGCATCACTGGAG  50
      ||||||||  ||| |||  ||||||| |||||   ||||||||||| |||
seq2  TTGTCCGT--ACT-ATG--TGAAACA-GGACA--TGATGCATCACT-GAG  41

seq1  GATGCTCTGGGCGAGCACGTGCAAAGCTCTTTGGCTCAGTTATGTGCTCT  100
      |||| ||| ||||||     |||||| ||||  |||||||||| ||||| 
seq2  GATG-TCT-GGCGAG---AGGCAAAG-TCTT--GCTCAGTTAT-TGCTC-  81

seq1  GTGGGAAACGCTATGTTGTTGGCCAGCCCACTCTCCCCTTATGTACTAAT  150
         || |||||||||||||||| |||||  ||   ||||||| |||||||
seq2  ---GGGAACGCTATGTTGTTGG-CAGCCACCT---CCCTTAT-TACTAAT  123

seq1  TTATTGGAAAAGCATGGGAAACATGTACTCAGGCTATGCATCCTGATCTG  200
      | ||  ||||||||| ||||||||||||||||||||||||| ||||||| 
seq2  TAAT--GAAAAGCAT-GGAAACATGTACTCAGGCTATGCAT-CTGATCTT  169

seq1  TGACTCTGGGTTGCTTTTTTTTTTTTTTTTAAATACATATTTTTTGAGAC  250
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  TGACTCTGGGTTGC-TTTTTTTTTTTTTTTAAATACATA-TTTTTGAGAC  217

seq1  AGGGTTTTTCAGCATATCCCTAGAACCCACTCTGTAGATCAGGGTGGCCT  300
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGGG-TTTTCAGCATATCCCTAGAA-CCACTCTGTAGATCAGGGTGGCCT  265

seq1  TGAACTCACGGAGATCTGTCTGCTTCCTGGGTACAGGAGCTAAAGGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCACGGAGATCTGTCTGCTTCCTGGGTACAGGAGCTAAAGGCTTG  315

seq1  TGCCACCACTGCCTGGCTGGGTTGCTCTCTTTATACTACCTTGATGCGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCACTGCCTGGCTGGGTTGCTCTCTTTATACTACCTTGATGCGGA  365

seq1  ATAGTACATTGCTTGACTTTGGATTAAAGTCTGTTTAGTTTCTAGAACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTACATTGCTTGACTTTGGATTAAAGTCTGTTTAGTTTCTAGAACGG  415

seq1  AAACATTGTGACAGTCACTACCAGGGAATCACAAGAAGCTGGTGTCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGTGACAGTCACTACCAGGGAATCACAAGAAGCTGGTGTCAGCT  465

seq1  TAAGCACAGCGGAGTGAGATAAAGAGCAATTAGGATATGGGAAGCACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACAGCGGAGTGAGATAAAGAGCAATTAGGATATGGGAAGCACCCT  515

seq1  GGGACGTCACAGGAATTTTATAGTAATTACAATTGTTGCAAAAGTTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACGTCACAGGAATTTTATAGTAATTACAATTGTTGCAAAAGTTGTGA  565

seq1  GATTTTCCCCAGCAGCCTTTTTTATCGCTAAGATTTATAAGAGGAATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCCCCAGCAGCCTTTTTTATCGCTAAGATTTATAAGAGGAATGTA  615

seq1  CAGCCACTTAGAAAAAATCTGTAAGATTTTTTTTCCCAATCAATCTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACTTAGAAAAAATCTGTAAGATTTTTTTTCCCAATCAATCTTATT  665

seq1  TTCTATAAAATGTAAAATCAAGCAAGAAAATGATTGAATAATGCGTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAAAATGTAAAATCAAGCAAGAAAATGATTGAATAATGCGTCCCT  715

seq1  GGGGAATAATGCAAGATCAATAAGTGGCAAATCCAAACGGCTTAATTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATAATGCAAGATCAATAAGTGGCAAATCCAAACGGCTTAATTCCT  765

seq1  GATTTGCTACTTTGTACATACAAATCCCAGCCCTCTCAAGATGGGAGCGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCTACTTTGTACATACAAATCCCAGCCCTCTCAAGATGGGAGCGA  815

seq1  TTTGCATGTGAAATTTAGGGGAAAAGTTCTCTGGATTAGTCCCTTAGGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATGTGAAATTTAGGGGAAAAGTTCTCTGGATTAGTCCCTTAGGTG  865

seq1  AGCATAGCATGCCTGCCTTCTGCAAAGACACTTAGCTGGGAGAAGAGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGCATGCCTGCCTTCTGCAAAGACACTTAGCTGGGAGAAGAGATG  915

seq1  CCCTCACTGCACACAGCACCGTCCCGCAGGACGGGAGTGATGGAGAGCGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACTGCACACAGCACCGTCCCGCAGGACGGGAGTGATGGAGAGCGC  965

seq1  TCCTGGGAGGAGCTGGAAGCATCCTTAGCTCTCCTGCAAGCACTGCTGTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGAGGAGCTGGAAGCATCCTTAGCTCTCCTGCAAGCACTGCTGTG  1015

seq1  TCTTCCTGGTTCTTTCTGAGTTGAATGCTCTGAGTTACCAGGCAGATCTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGGTTCTTTCTGAGTTGAATGCTCTGAGTTACCAGGCAGATCTC  1065

seq1  TCAGGATTAGAACTCACTGTGTTATTACGAAGGGTTCCGTCAGGGTCAGC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTAGAACTCACTGTGTTATTACGAAGGGTTCCGTCAGGGTCAGC  1115

seq1  CTTGCCTGTGGGTGGAGTGGGCCCTAAATGAGCTCTTTCAGTTCAGAGGC  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTGTGGGTGGAGTGGGCCCTAAATGAGCTCTTTCAGTTCAGAGGC  1165

seq1  TGAGAAATGCTTTTGAATTC  1220
      ||||||||||||||||||||
seq2  TGAGAAATGCTTTTGAATTC  1185

seq1: chr15_5220526_5221047
seq2: B6Ng01-117F09.g_70_591 (reverse)

seq1  TAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTC  50

seq1  CCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCA  100

seq1  GACCTTCAAAGAAGATCTAACTCCAGTTCTGCACAAACTTTTTCACAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTCAAAGAAGATCTAACTCCAGTTCTGCACAAACTTTTTCACAAGA  150

seq1  TAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGCCACTATTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTAGAAGGTATTCTACCCAACTCATTTTATGAAGCCACTATTACT  200

seq1  CTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACC  250

seq1  AATTTCTCTTATGAACATCGATGCAAAAATTCTTAATAAAATTCTCGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCTTATGAACATCGATGCAAAAATTCTTAATAAAATTCTCGCTA  300

seq1  ACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGT  350

seq1  TTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGT  400

seq1  AATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGT  450

seq1  TAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAA  500

seq1  GTTCTGGAAAGATCAGGAATTC  522
      ||||||||||||||||||||||
seq2  GTTCTGGAAAGATCAGGAATTC  522