BAC Information

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BAC

Clone NameB6Ng01-117P21
Chromosome10 (Build37)
Map Location 104,053,514 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117P21.bB6Ng01-117P21.g
ACCDH922589DH922590
length1,171893
definitionDH922589|Mus musculus domesticus DNA, BAC clone: B6Ng01-117P21, 5' end.DH922590|Mus musculus domesticus DNA, BAC clone: B6Ng01-117P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgagtggatgttggattttg
tcaaatgctttctctgcatttaacgagacgatcatgtggtttttgtcttg
gagtttgtttatatactggattacattgatggatttccgtatattgaacc
atccctgcatccctgggatgaaacctacttggtcaggatgaatgattgtt
ttgatgtgttcttggattcggttagcaagaactttattgaggatttttgc
atcgatattcataagggaaattggtcgggtacagtagcctgggctggcat
ttgtgttctcttagtttctgtataacatctgcccagcctcttctggcttt
catagtctctggtgaaaaatctggtgtaattctgataggcttgcctttat
atgttacttgacctttttcccttactgcttttagtattctatctttattt
agtgcatttgatgttctgattattatgtgtcgggaggaatttcttttatg
gtccagtctatttggagttctgtaggcttcttgtatgtacatgagcatct
ctttctttagctttgggaagttttcttcaataattttgttgaagatgttt
gctggtcctttgagttgaaaatcttcattctcatccactcctattatgtg
taggtttggtcttctcattgtgtcctggatttcctggatgttttgagtta
ggatctttttgcattttccattttcattgattgttgtgccgatgttctct
atggaatcttctgcacctgagattctctcttccatctcttgtattctgtt
gctgatgctggcatctatcgttccagatttctttcctagggtttctatct
ccagcgttgcctcactttgggttttcttcactgtgtctagtatgggtttg
ttcatttccattatctgttggatgtgttttcctgtttttctataggactt
ctacctgtttggttgtgtttcctgtttttctttaggacttgtactcttta
gcagtgtctcttgtattctttagtgagttataaattctctttagtcctct
acatcatcatgaggaatgcctttaaatccaggcctacctttcaaggtgtt
tagaagtccttgaactgtgcaggaggatctggtttgatgatggtcttatc
ctgtaataggatcttacgcgt

gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctcgcagttcctca
gaaaattggacatagtactaccggaagatccaacaatacctctcctgggc
atatacccataagatgttccaactggtaataaggacacatgctcctctac
gtttatagcagccttatttataatagccagaagttggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgaggtatctttacacaatg
gagtactattcagctattaaaaacaatgaatttatgaaattcttaggcaa
atgaatggatctggaggatatcatcctgagtgaggtaacccaatcacaaa
agaagtcacttgatatgcactcactgaaacttagaatacccaagatacaa
tttgcaaaacagaaaaaaatcaagaagagggaagaccaacgtgtggatac
ctcattcctccttagaatagggaacaaaatacccagggaaggagttacag
agacaaagtttggagctaagacaaaaggatggaccatccagagactaccc
cacccggagatccatccccataaccaattttgtaatatcacagcataaag
tataaaaaacaaaatcaggatcaaaatcattacttttgatgcaaaagata
acctgcaaccttttattcaatctcttgggtgtaaaatttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053514_104054363
seq2: B6Ng01-117P21.g_65_675 (reverse)

seq1  TGTTTAGCAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGCTA  50
      ||||| ||||||||       |||||||||||| |||||||         
seq2  TGTTTTGCAAATTG-------TATCTTGGGTATTCTAAGTT---------  34

seq1  ATATCCACTTATCAGTGAGTACATATTGCGCGAGTTCCTTTGTGATTGGG  100
                 ||||||||| |||||   | || ||| ||||||||||||
seq2  -----------TCAGTGAGTGCATATCAAGTGACTTCTTTTGTGATTGGG  73

seq1  TTACCGCACTCAGGATGATACTCTCCAGGTCCATCCATTTGCCTAGGAAT  150
      ||||| ||||||||||||||  |||||| ||||| |||||||||| ||||
seq2  TTACCTCACTCAGGATGATATCCTCCAGATCCATTCATTTGCCTAAGAAT  123

seq1  TTCATAAATTCATTCTTTTTAATAGCTCCATTTACATTTAATTTAATTAA  200
      |||||||||||||| ||||||||||||  ||                   
seq2  TTCATAAATTCATTGTTTTTAATAGCTGAAT-------------------  154

seq1  TGTAATTACAATTAATTAATTTATTAATTAAATAATTTAATAATTTAATT  250
                                                        
seq2  --------------------------------------------------  154

seq1  GATAAATTAATTTAATTAATTAATTTAATTAATTAAATTAAATAATAATT  300
                                                        
seq2  --------------------------------------------------  154

seq1  TAATAATAAATTAAATATTTTAAAATTAATAATAATTTTATAAGTAAATA  350
                                                ||||    
seq2  ------------------------------------------AGTA----  158

seq1  ATTTAATTAATGTAATTTAATTAATGTAATTACATTACATTTAATAGCTC  400
                                                     |||
seq2  -----------------------------------------------CTC  161

seq1  CATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGGGC  450
      |||||||||||  |||| ||||||||||||| |||||||||||||||| |
seq2  CATTGTGTAAAGATACCTCATTTTCTGTATCCATTCCTCTGTTGAGGGAC  211

seq1  ATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAAT  500
      |||||||||||||||| || |||||||||||||||||||||||||| || 
seq2  ATCTGGGTTCTTTCCAACTTCTGGCTATTATAAATAAGGCTGCTATAAAC  261

seq1  ATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATAT  550
       ||| ||||||||||||||| ||||| |||||  |||||| ||| |||||
seq2  GTAGAGGAGCATGTGTCCTTATTACCAGTTGGAACATCTTATGGGTATAT  311

seq1  GCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTC  600
      |||||| |||||||||| |||||| |||||||||||||||||||||||||
seq2  GCCCAGGAGAGGTATTGTTGGATCTTCCGGTAGTACTATGTCCAATTTTC  361

seq1  TGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCC  650
      ||| |||| || |||| |||||||||||||||||||||||| ||||||||
seq2  TGAGGAACTGCGAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCC  411

seq1  CACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCT  461

seq1  GCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGA  750
      |||||||||||| |||||||||||||||||||||||||| |||| |||||
seq2  GCTGTCACCTGAGTTTTTGATCTTAGCCATTCTGACTGGAGTGAAGTGGA  511

seq1  ATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAA  561

seq1  CATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  850
      |||||||||||||||||||| |||||| ||||||||||||||||||||||
seq2  CATTTTTTCAGGTGCTTCTCAGCCATTTGGTATTCCTCAGGTGAGAATTC  611


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