BAC Information

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BAC

Clone NameB6Ng01-119J12
Chromosome10 (Build37)
Map Location 125,069,151 - 125,223,404
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC671416, Slc16a7, LOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994
Downstream geneLrig3, LOC100043547
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119J12.bB6Ng01-119J12.g
ACCDH923766DH923767
length8431,025
definitionDH923766|Mus musculus domesticus DNA, BAC clone: B6Ng01-119J12, 5' end.DH923767|Mus musculus domesticus DNA, BAC clone: B6Ng01-119J12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,069,151 - 125,069,993)(125,222,359 - 125,223,404)
sequence
gaattcctttctccaaactgtatcctgttgcaggattttctctatccaca
cacattagggcagtggcaggcctgtgattggacaggaaaagggagaaaaa
cctaggagtttggggagagcgagagcgagagcgaaaggtcccagggggag
aaggagagaggccaacatggaggcagatgaacatgaaaatgatcctgatc
cccgcgtggttttaaacagccacaagtagctaagattttcacaaggttag
aataattggattaaagctttagctttatcaattggttctgaaattattgt
attggcatcttgtaaattgtgatcttattgttacataaatctgatcggaa
taattaagcgggttttgttttgttttttgttttttgttgttttgttttgt
ttttgtggttttacaagacagggtttctctgtatggccctggctgtcctg
gaactcactctgtagaccaggctggcaccgaactcagagatctgcttgct
tctgcctcccgagtgctgcgattaaaggcgggtgccaccatgcccagctg
gataattaagctttaagagtcatgtttctactgagatggctgatcgtggg
gtatgtggggcgtttggtggaagggagatgaactcgttagctgggagaga
gtagctcagcaatgagaacacacacagagctgcaccctgctgggacatag
tgttgtggcctgccagtactggtactaaagcaagaacacagaccgaccgg
cgggcagagcagagacatggcatgataactttttaaatatttcccgcaaa
actgatgaccctaaaatctacctccttcccagtctcaccagtc
gaattctctttgcaaggagcccaggagggtgaacacacagggatcctctg
tggccttgggggtgtggggaaggccctagcaagtcctctgtgtctgtcag
aagtttgttcaaatgacgcatggcttggatttaacgttttcaggtacttt
atctttactttcacatttgaaattcgatcagtctaacgtaaatacgaagc
agccaggccttaaagaacaagacaggctctctaaacactctgaactccag
aagaaaacacggccatgttttcataatatacttagatgcaggaaatgcat
acttaatgggctagggtgacttcatgtaatctgccacccacagataatta
attaagctactcagtgagtgtcgggcaaacaagttaacatcgcaggctct
caggagtgtgaagtagtgtcctgtttacatttcctggatggttcagtgaa
gagctgtgggaaccaccaaagggaggaggctatttcaagttgtggccctc
tcaaaatgctaagagcggctattagccctcaaaggctgcaggtctaatca
gcttcaaatagtgagaaacagctggccaggaggccggtctgtcagtgtat
gaggtgtctgtctgggaggtggcttggaggagagctcacagactccggct
cattatctccagaatgaaaatggaaccacagctgtctcttctgatagatt
tgattaaactgctaagctgggggtggaggggtgtcagagagggcgagagg
aacgtcagcagaggctcggagccaacagcgtgtgcacgtatatttccaaa
ctcctccgggcaggaggtatctcagtaatgggacttgccatgagatctct
ggcaggctcggtgttggaaccacatcactgaaactgcttgtcttgggata
tttattttgtcgtcttgtctgcaactctccccgctggatactatccagag
gagtaaatgattcatcatggttgaactttccaagcgagtttgctttgcat
tcagagacacttccatggagatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_125069151_125069993
seq2: B6Ng01-119J12.b_47_889

seq1  GAATTCCTTTCTCCAAACTGTATCCTGTTGCAGGATTTTCTCTATCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCTCCAAACTGTATCCTGTTGCAGGATTTTCTCTATCCACA  50

seq1  CACATTAGGGCAGTGGCAGGCCTGTGATTGGACAGGAAAAGGGAGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAGGGCAGTGGCAGGCCTGTGATTGGACAGGAAAAGGGAGAAAAA  100

seq1  CCTAGGAGTTTGGGGAGAGCGAGAGCGAGAGCGAAAGGTCCCAGGGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGAGTTTGGGGAGAGCGAGAGCGAGAGCGAAAGGTCCCAGGGGGAG  150

seq1  AAGGAGAGAGGCCAACATGGAGGCAGATGAACATGAAAATGATCCTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGAGGCCAACATGGAGGCAGATGAACATGAAAATGATCCTGATC  200

seq1  CCCGCGTGGTTTTAAACAGCCACAAGTAGCTAAGATTTTCACAAGGTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCGTGGTTTTAAACAGCCACAAGTAGCTAAGATTTTCACAAGGTTAG  250

seq1  AATAATTGGATTAAAGCTTTAGCTTTATCAATTGGTTCTGAAATTATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTGGATTAAAGCTTTAGCTTTATCAATTGGTTCTGAAATTATTGT  300

seq1  ATTGGCATCTTGTAAATTGTGATCTTATTGTTACATAAATCTGATCGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCATCTTGTAAATTGTGATCTTATTGTTACATAAATCTGATCGGAA  350

seq1  TAATTAAGCGGGTTTTGTTTTGTTTTTTGTTTTTTGTTGTTTTGTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGCGGGTTTTGTTTTGTTTTTTGTTTTTTGTTGTTTTGTTTTGT  400

seq1  TTTTGTGGTTTTACAAGACAGGGTTTCTCTGTATGGCCCTGGCTGTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGGTTTTACAAGACAGGGTTTCTCTGTATGGCCCTGGCTGTCCTG  450

seq1  GAACTCACTCTGTAGACCAGGCTGGCACCGAACTCAGAGATCTGCTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACTCTGTAGACCAGGCTGGCACCGAACTCAGAGATCTGCTTGCT  500

seq1  TCTGCCTCCCGAGTGCTGCGATTAAAGGCGGGTGCCACCATGCCCAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCGAGTGCTGCGATTAAAGGCGGGTGCCACCATGCCCAGCTG  550

seq1  GATAATTAAGCTTTAAGAGTCATGTTTCTACTGAGATGGCTGATCGTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTAAGCTTTAAGAGTCATGTTTCTACTGAGATGGCTGATCGTGGG  600

seq1  GTATGTGGGGCG-TTGGTGGAAGGGAGATGAACTCGTTAGCTGGGAGAGA  649
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTATGTGGGGCGTTTGGTGGAAGGGAGATGAACTCGTTAGCTGGGAGAGA  650

seq1  GTAGCTCAGCAATGAGAACACACACAGAGCTGCACCCTGCTGGGACATAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCAGCAATGAGAACACACACAGAGCTGCACCCTGCTGGGACATAG  700

seq1  TGTTGTGGCCTGCCAGTACTGGTACTAAAGCAGGAACACAGACCGACCGG  749
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTTGTGGCCTGCCAGTACTGGTACTAAAGCAAGAACACAGACCGACCGG  750

seq1  CGGGCAGAGCAGGAGACATGGCATGATAACTTTTTAAATATTTCCCGCAA  799
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CGGGCAGAGCA-GAGACATGGCATGATAACTTTTTAAATATTTCCCGCAA  799

seq1  CACTGATGACCCTAAAATCTACCTCCTTCCCAGTCTCACCAGTC  843
       |||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATGACCCTAAAATCTACCTCCTTCCCAGTCTCACCAGTC  843

seq1: chr10_125222359_125223404
seq2: B6Ng01-119J12.g_68_1092 (reverse)

seq1  GGCATCTCCCCTGGGAAGTTGTCTTCTGAAATGCAAAAGCAAAACCTCTG  50
      |||||||  ||  ||||| |||| |||| ||||| ||||||||  ||| |
seq2  GGCATCT--CCATGGAAG-TGTC-TCTG-AATGC-AAAGCAAA--CTC-G  41

seq1  CTTTGGGAAGTTTACAACCATGATGAATTCATTTTTACTCCTCTTGGATA  100
      | |||| |||||  ||||||||||||| |||  |||||||||| ||||||
seq2  C-TTGGAAAGTT--CAACCATGATGAA-TCA--TTTACTCCTC-TGGATA  84

seq1  GTATTCACAGCGGGGAGAGTTGCAGACAAGACGAACAAAAATAAAATATC  150
      ||||   |||||||||||||||||||||||||| ||||||   |||||||
seq2  GTAT--CCAGCGGGGAGAGTTGCAGACAAGACG-ACAAAA--TAAATATC  129

seq1  CCAAGACAAGCAGTTTCAGTGATGTGGTTCCAACACCGAGCCTGCCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACAAGCAGTTTCAGTGATGTGGTTCCAACACCGAGCCTGCCAGAG  179

seq1  ATCTCATGGCAAGTCCCATTACTGAGATACCTCCTGCCCGGAGGAGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGGCAAGTCCCATTACTGAGATACCTCCTGCCCGGAGGAGTTTG  229

seq1  GAAATATACGTGCACACGCTGTTGGCTCCGAGCCTCTGCTGACGTTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATACGTGCACACGCTGTTGGCTCCGAGCCTCTGCTGACGTTCCTC  279

seq1  TCGCCCTCTCTGACACCCCTCCACCCCCAGCTTAGCAGTTTAATCAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCTCTCTGACACCCCTCCACCCCCAGCTTAGCAGTTTAATCAAATC  329

seq1  TATCAGAAGAGACAGCTGTGGTTCCATTTTCATTCTGGAGATAATGAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAAGAGACAGCTGTGGTTCCATTTTCATTCTGGAGATAATGAGCC  379

seq1  GGAGTCTGTGAGCTCTCCTCCAAGCCACCTCCCAGACAGACACCTCATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTGTGAGCTCTCCTCCAAGCCACCTCCCAGACAGACACCTCATAC  429

seq1  ACTGACAGACCGGCCTCCTGGCCAGCTGTTTCTCACTATTTGAAGCTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAGACCGGCCTCCTGGCCAGCTGTTTCTCACTATTTGAAGCTGAT  479

seq1  TAGACCTGCAGCCTTTGAGGGCTAATAGCCGCTCTTAGCATTTTGAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTGCAGCCTTTGAGGGCTAATAGCCGCTCTTAGCATTTTGAGAGG  529

seq1  GCCACAACTTGAAATAGCCTCCTCCCTTTGGTGGTTCCCACAGCTCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAACTTGAAATAGCCTCCTCCCTTTGGTGGTTCCCACAGCTCTTCA  579

seq1  CTGAACCATCCAGGAAATGTAAACAGGACACTACTTCACACTCCTGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACCATCCAGGAAATGTAAACAGGACACTACTTCACACTCCTGAGAG  629

seq1  CCTGCGATGTTAACTTGTTTGCCCGACACTCACTGAGTAGCTTAATTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGATGTTAACTTGTTTGCCCGACACTCACTGAGTAGCTTAATTAAT  679

seq1  TATCTGTGGGTGGCAGATTACATGAAGTCACCCTAGCCCATTAAGTATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTGGGTGGCAGATTACATGAAGTCACCCTAGCCCATTAAGTATGC  729

seq1  ATTTCCTGCATCTAAGTATATTATGAAAACATGGCCGTGTTTTCTTCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGCATCTAAGTATATTATGAAAACATGGCCGTGTTTTCTTCTGG  779

seq1  AGTTCAGAGTGTTTAGAGAGCCTGTCTTGTTCTTTAAGGCCTGGCTGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGAGTGTTTAGAGAGCCTGTCTTGTTCTTTAAGGCCTGGCTGCTT  829

seq1  CGTATTTACGTTAGACTGATCGAATTTCAAATGTGAAAGTAAAGATAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTTACGTTAGACTGATCGAATTTCAAATGTGAAAGTAAAGATAAAG  879

seq1  TACCTGAAAACGTTAAATCCAAGCCATGCGTCATTTGAACAAACTTCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGAAAACGTTAAATCCAAGCCATGCGTCATTTGAACAAACTTCTGA  929

seq1  CAGACACAGAGGACTTGCTAGGGCCTTCCCCACACCCCCAAGGCCACAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACAGAGGACTTGCTAGGGCCTTCCCCACACCCCCAAGGCCACAGA  979

seq1  GGATCCCTGTGTGTTCACCCTCCTGGGCTCCTTGCAAAGAGAATTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCCTGTGTGTTCACCCTCCTGGGCTCCTTGCAAAGAGAATTC  1025