BAC Information

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BAC

Clone NameB6Ng01-119L14
Chromosome10 (Build37)
Map Location 28,521,696 - 28,602,408
singlet/doubletdoublet
Overlap geneE430004N04Rik
Upstream geneLOC100040961, LOC100040401, Ptprk
Downstream gene4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119L14.bB6Ng01-119L14.g
ACCDH923863DH923864
length1,1801,103
definitionDH923863|Mus musculus domesticus DNA, BAC clone: B6Ng01-119L14, 5' end.DH923864|Mus musculus domesticus DNA, BAC clone: B6Ng01-119L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,521,696 - 28,522,896)(28,601,295 - 28,602,408)
sequence
gaattctgaagattaacatttgtggagtctagggtctatcctctgtgcag
gttaggctaacactaagtgtcttacttaggctacaatgctgaacactaat
tatttgccttttctattctggatattatgtctttatcaggatataagcta
ccttattagccttatctgtcatatctatctatgcatccatccttctatca
tctatgtatctatctatcatttcaatcaattaataaactatttaactgtg
aatcatctattgcctacctacccataagttaacattctattatttcccct
ttataaatgcttgctagagtgttttgggaaagatgattttgatacatttg
agtctcccccccctccccttccctatttacctctccctttctctctttat
gaagaatcacaatttttatttagtcatggtaattattaattttaggtaaa
atatagtctctattcccctcaattttctgattaagtatagaaggataaaa
gtatgttttagagttgctgtgagaattaagcaatttcatttaggaaaagt
gcttagaataacatgaggaatataataaattcctaccagtcatgagacca
ggcaaacttattttaaatacttatgttaaaatagacaatggatgacagtg
cactgaaaatcttctacacagcaaacaaagccaccaagtgaaagggcacc
ctatagaatggaagaaactatttacaaactctacatccaaaaggcactgt
tctccattttcaacagaaaggaactcttaacgagtcagtagcagcagcaa
ttaaaatgaagattagactgtgtgaaggcaagatttggagacaaaaaaaa
aaaaaggaacagcaggtatcctatgatctcatgtgtaaccagaacctaaa
aaccatctcttaccgtttggtgggtgaaggggttgctcttagagtctgag
gacaatgagaaggattaggaaggttagcatagttacaaaggtgcagctat
gcaaaacagtaattctggtgcgtttttgccacaatatatactaagatgag
catgactactgtacattgttggggctaaaagagattttagaagtttttca
tagggaatggagaatatttgagtaaagggttgtatctaattaaatattat
accatgttacaggttccatgtgacattgta
gaattcattttctcattttctagtcaaagacatgggcttacaaaaagtcc
aaattcaactgtgctcatataccaaactaaaaatattcagtgctcactct
tagctgaaaattgtactggtcccagattatccataatatagctttcttag
gatatgtggttgggtcatgattctctatggtgtctaaaaaccaaaatgca
gagacatcaactttctcatttactaatcaaatgtgtgtaaactaaactaa
aaaattatcaaaaacaatcaccttgtattttactaattacacataataca
tctcctaaaattttgttattgacatataatatggtaacagttatgtcact
gagcaatttttaaagcattaaaataaagattagttgttatttaaagagaa
aaggataagaaatcaggatataaacattatataaaagatcactagctgtg
attatatgatgaaaataatctcataggttgctatctttaaagactcttca
gtactaaatcatcaaatacgtttttccaacttataaattaattatgagat
cagagtaaagttttgtaaaagtctgacttatgaaaaaaacctaaggtttc
ccactattctctatgtaacctaccttgaaaaattctcagtctcttcacgt
tatgaaagacaaaagtaatgttatttctgtatatttaacacataataaga
aaacttataaaatatgtttgcctttaatttttacaggcatatagctataa
gtactattctgttatttattcattaataatctctttggcttctgtcaact
atatttataaggctcattacaattatattgtgtctttcttctcatcaaat
attatggttaactaaatggtttactacaatcctaataagcattcattaga
agcagatcaagaatatagtatataaagtacaggcaaattttcagaacctg
ggtgatttttggtcagcaactctcccttttagaagtggagggaggaggtt
agagaagttttgtgactcataatgtgccagttgttgggagtgacatttat
ttaacattgtattttaaacaatgaaatgtgagtcaaacttatttcactgt
tcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_28521696_28522896
seq2: B6Ng01-119L14.b_46_1225

seq1  GAATTCTGAAGATTAACATTTGTGGAGTCTAGGGTCTATCCTCTGTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGATTAACATTTGTGGAGTCTAGGGTCTATCCTCTGTGCAG  50

seq1  GTTAGGCTAACACTAAGTGTCTTACTTAGGCTACAATGCTGAACACTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGCTAACACTAAGTGTCTTACTTAGGCTACAATGCTGAACACTAAT  100

seq1  TATTTGCCTTTTCTATTCTGGATATTATGTCTTTATCAGGATATAAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCCTTTTCTATTCTGGATATTATGTCTTTATCAGGATATAAGCTA  150

seq1  CCTTATTAGCCTTATCTGTCATATCTATCTATGCATCCATCCTTCTATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTAGCCTTATCTGTCATATCTATCTATGCATCCATCCTTCTATCA  200

seq1  TCTATGTATCTATCTATCATTTCAATCAATTAATAAACTATTTAACTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTATCTATCTATCATTTCAATCAATTAATAAACTATTTAACTGTG  250

seq1  AATCATCTATTGCCTACCTACCCATAAGTTAACATTCTATTATTTCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTATTGCCTACCTACCCATAAGTTAACATTCTATTATTTCCCCT  300

seq1  TTATAAATGCTTGCTAGAGTGTTTTGGGAAAGATGATTTTGATACATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATGCTTGCTAGAGTGTTTTGGGAAAGATGATTTTGATACATTTG  350

seq1  AGTCTCCCCCCCCTCCCCTTCCCTATTTACCTCTCCCTTTCTCTCTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCCCCCCCTCCCCTTCCCTATTTACCTCTCCCTTTCTCTCTTTAT  400

seq1  GAAGAATCACAATTTTTATTTAGTCATGGTAATTATTAATTTTAGGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATCACAATTTTTATTTAGTCATGGTAATTATTAATTTTAGGTAAA  450

seq1  ATATAGTCTCTATTCCCCTCAATTTTCTGATTAAGTATAGAAGGATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTCTCTATTCCCCTCAATTTTCTGATTAAGTATAGAAGGATAAAA  500

seq1  GTATGTTTTAGAGTTGCTGTGAGAATTAAGCAATTTCATTTAGGAAAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTTTAGAGTTGCTGTGAGAATTAAGCAATTTCATTTAGGAAAAGT  550

seq1  GCTTAGAATAACATGAGGAATATAATAAATTCCTACCAGTCATGAGACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAATAACATGAGGAATATAATAAATTCCTACCAGTCATGAGACCA  600

seq1  GGCAAACTTATTTTAAATACTTATGTTAAAATAGACAATGGATGACAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACTTATTTTAAATACTTATGTTAAAATAGACAATGGATGACAGTG  650

seq1  CACTGAAAATCTTCTACACAGCAAACAAAGCCACCAAGTGAAAGGGCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAAATCTTCTACACAGCAAACAAAGCCACCAAGTGAAAGGGCACC  700

seq1  CTATAGAATGGAAGAAACTATTTACAAACTCTACATCCAAAAGGCACTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAATGGAAGAAACTATTTACAAACTCTACATCCAAAAGGCACTGT  750

seq1  TCTCCATTTTCAACAGAAAGGAACTCTTAACGAGTCAGTAGCAGCAGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTTTCAACAGAAAGGAACTCTTAACGAGTCAGTAGCAGCAGCAA  800

seq1  TTAAAATGAAGATTAGACTGTGTGAAGGCAAGATTTGGAGACAAAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGAAGATTAGACTGTGTGAAGGCAAGATTTGGAGACAAAAAAAA  850

seq1  AAAAAGGAACAGCAGGTATCCTATGATCTCATGTGTAACCAGAACCTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAACAGCAGGTATCCTATGATCTCATGTGTAACCAGAACCTAAA  900

seq1  AACCATCTCTTACCGTTTGGT-GGTGAAGGGGTTGCTCTTAGAGTCTGAG  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AACCATCTCTTACCGTTTGGTGGGTGAAGGGGTTGCTCTTAGAGTCTGAG  950

seq1  GACAATGAGAAGGATTAGGAAGGTTAGCAATAGTTAACAAAGGTGCAGCT  999
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  GACAATGAGAAGGATTAGGAAGGTTAGC-ATAGTT-ACAAAGGTGCAGCT  998

seq1  ATGCAAAAACAAGTAATTCTGGTGCGTTTTTG-CACAATAATATACTTAG  1048
      ||||||||   ||||||||||||||||||||| |||||| |||||| || 
seq2  ATGCAAAA--CAGTAATTCTGGTGCGTTTTTGCCACAAT-ATATAC-TAA  1044

seq1  GATGAAGCAATGAACTAACTGTACATTGTTGGGGCTAAAAAGGAAGAATT  1098
      |||| ||| ||| ||| |||||||||||||||||||||||  |    |||
seq2  GATG-AGC-ATG-ACT-ACTGTACATTGTTGGGGCTAAAAGAG----ATT  1086

seq1  TTAGAAGGTTTTTTCATAGGGAAATGAGAAATATTTGAAGTTAAAGGTGT  1148
      |||||||  ||||||||||||||  ||| |||||||||   ||||||  |
seq2  TTAGAAG--TTTTTCATAGGGAATGGAG-AATATTTGA--GTAAAGGGTT  1131

seq1  GTAATCTAATTTAAATA-TATACAATGTGTACATGTATCAATGTGACATA  1197
      || |||||| ||||||| ||||| |||| |||| || || ||||||||| 
seq2  GT-ATCTAA-TTAAATATTATACCATGT-TACAGGT-TCCATGTGACAT-  1176

seq1  TGTA  1201
      ||||
seq2  TGTA  1180

seq1: chr10_28601295_28602408
seq2: B6Ng01-119L14.g_65_1167 (reverse)

seq1  GGAACAGTGAAAATAAGTTTGACTTCACATTTTCAATTTGTTTTATAATA  50
      ||||||||| ||||||||||||| ||||| |||||  ||| |||| ||||
seq2  GGAACAGTG-AAATAAGTTTGAC-TCACA-TTTCA--TTG-TTTAAAATA  44

seq1  CAATG-TAAATAAATGTCAACTCCCAACAACTGGCACCATTATGAGTCAC  99
      ||||| |||||||||||| ||||||||||||||||| |||||||||||||
seq2  CAATGTTAAATAAATGTC-ACTCCCAACAACTGGCA-CATTATGAGTCAC  92

seq1  AGAACCTTCTCTAACCTCCTCCCTCCACTTCTAAAAGGGAGAGTTGCTGA  149
      | || |||||||||||||||||||||||||||||||||||||||||||||
seq2  A-AAACTTCTCTAACCTCCTCCCTCCACTTCTAAAAGGGAGAGTTGCTGA  141

seq1  CCAAAGAATCACCCAGGTTCTGAAAATTTGCCTTGTACTTTATATACTAT  199
      ||||| |||||||||||||||||||||||||| |||||||||||||||||
seq2  CCAAA-AATCACCCAGGTTCTGAAAATTTGCC-TGTACTTTATATACTAT  189

seq1  ATTCTTGATCTTGCTTCTAATGAATGCTTATTAGGATTGTAGTAAACCAT  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGATC-TGCTTCTAATGAATGCTTATTAGGATTGTAGTAAACCAT  238

seq1  TTAGTTAACCATAATATTTGATGAGAAGAAAGACACAATATAATTGTAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAACCATAATATTTGATGAGAAGAAAGACACAATATAATTGTAAT  288

seq1  GAGCCTTATAAATATAGTTGACAGAAGCCAAAGAGATTATTAATGAATAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTATAAATATAGTTGACAGAAGCCAAAGAGATTATTAATGAATAA  338

seq1  ATAACAGAATAGTACTTATAGCTATATGCCTGTAAAAATTAAAGGCAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGAATAGTACTTATAGCTATATGCCTGTAAAAATTAAAGGCAAAC  388

seq1  ATATTTTATAAGTTTTCTTATTATGTGTTAAATATACAGAAATAACATTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATAAGTTTTCTTATTATGTGTTAAATATACAGAAATAACATTA  438

seq1  CTTTTGTCTTTCATAACGTGAAGAGACTGAGAATTTTTCAAGGTAGGTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTCTTTCATAACGTGAAGAGACTGAGAATTTTTCAAGGTAGGTTA  488

seq1  CATAGAGAATAGTGGGAAACCTTAGGTTTTTTTCATAAGTCAGACTTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGAATAGTGGGAAACCTTAGGTTTTTTTCATAAGTCAGACTTTTA  538

seq1  CAAAACTTTACTCTGATCTCATAATTAATTTATAAGTTGGAAAAACGTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTTTACTCTGATCTCATAATTAATTTATAAGTTGGAAAAACGTAT  588

seq1  TTGATGATTTAGTACTGAAGAGTCTTTAAAGATAGCAACCTATGAGATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGATTTAGTACTGAAGAGTCTTTAAAGATAGCAACCTATGAGATTA  638

seq1  TTTTCATCATATAATCACAGCTAGTGATCTTTTATATAATGTTTATATCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATCATATAATCACAGCTAGTGATCTTTTATATAATGTTTATATCC  688

seq1  TGATTTCTTATCCTTTTCTCTTTAAATAACAACTAATCTTTATTTTAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTTATCCTTTTCTCTTTAAATAACAACTAATCTTTATTTTAATG  738

seq1  CTTTAAAAATTGCTCAGTGACATAACTGTTACCATATTATATGTCAATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAAATTGCTCAGTGACATAACTGTTACCATATTATATGTCAATAA  788

seq1  CAAAATTTTAGGAGATGTATTATGTGTAATTAGTAAAATACAAGGTGATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTTTAGGAGATGTATTATGTGTAATTAGTAAAATACAAGGTGATT  838

seq1  GTTTTTGATAATTTTTTAGTTTAGTTTACACACATTTGATTAGTAAATGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGATAATTTTTTAGTTTAGTTTACACACATTTGATTAGTAAATGA  888

seq1  GAAAGTTGATGTCTCTGCATTTTGGTTTTTAGACACCATAGAGAATCATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTGATGTCTCTGCATTTTGGTTTTTAGACACCATAGAGAATCATG  938

seq1  ACCCAACCACATATCCTAAGAAAGCTATATTATGGATAATCTGGGACCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACCACATATCCTAAGAAAGCTATATTATGGATAATCTGGGACCAG  988

seq1  TACAATTTTCAGCTAAGAGTGAGCACTGAATATTTTTAGTTTGGTATATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTTTCAGCTAAGAGTGAGCACTGAATATTTTTAGTTTGGTATATG  1038

seq1  AGCACAGTTGAATTTGGACTTTTTGTAAGCCCATGTCTTTGACTAGAAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGTTGAATTTGGACTTTTTGTAAGCCCATGTCTTTGACTAGAAAA  1088

seq1  TGAGAAAATGAATTC  1114
      |||||||||||||||
seq2  TGAGAAAATGAATTC  1103