BAC Information

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BAC

Clone NameB6Ng01-120F14
Chromosome10 (Build37)
Map Location 100,715,493 - 100,845,049
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream geneMgat4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120F14.bB6Ng01-120F14.g
ACCDH924315DH924316
length1,200982
definitionDH924315|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F14, 5' end.DH924316|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,843,818 - 100,845,049)(100,715,493 - 100,716,479)
sequence
gaattcatctgcctagagtcataaaacaaattaaatttatccaataaaat
tctagatgaagttcaaaatgatgcaaaataaatatgcatattatgtcaag
gctatattaattgcatgcaatacagacagcattatttaaaaggaacacaa
aagatttttttaattaaaaatcgtattagagtaattttaaataacatgaa
atgtcaaggaatagtaaggaaatatgctttgtgactttcaatttgtggtg
tcagtttgtgacataaaaaactctcacaggcatctaaacattttcattca
gcttttttgttttatttattatattgtgtacatgtttatcaagttctgca
atttgttatcttttcagaaccatgtcttttttgaaccagtatacagaaaa
attcaattttttatataccaggtattttttaaagtaaaatttacatgaag
tattttatacttctgttctaagaaaaaatacatatgttttaatttttttc
tccagtgacattaaaaaatgaacagatttaaatttcaaaacataaacact
agagacccctgaagtactgcacacttgacctctttattttatttcattca
gtgtagtgtgtctatcaactagttcttctctacttgttagtgagaccaac
aaacaggaagttatgtgtcagaaacaaaatgttgagagagagagagctca
acaaatttccaacaaacatgaacttatgtgtcagaaacaagttaagaggt
tgagaaagagagctcaatggatcatgtactcaatttatttctggttatag
acattcccagatttctctctgcttatcttgaaaagaaaaaagaaaaatag
aaaagggggttgaagggaaccacttggaacatttcctgagaaagtatttt
ccatgaaaaagactctcattctgaaatatccatgtaaagtgagtgttcta
acacagctgataagtacactgtttatggtgtatcttaaatatgggtagtg
tcttgaagacatgctctcacatgctgtagtatttgcatatattacaacac
tgatggatgtttaggaggttaaaaatgttggtctagctgagagtgggtcg
taaggtggggagtggactttagacctaaaggttcatccaatcgagttgct
attctgctgttggtcagatctcgagcactgggtcggtctcaccaagtttt

gaattctatgctgattgagaatacaaaactgtaagaaacagaagtggtag
attattcaaaggcaacagcattatccataaacaaaaagagtgttatgcaa
ttgaactcacaatgactgtgatagtatacacaaaatctgcacaagttctc
ataagacaagtccttagtactaataaaaggacatgggttgaaatccccat
ttgtaactgaaacgctgtttgcaattgatctctactggatgtgaaaaaag
ttaatttttccaagtaaaggtccaagagaaggtcaccacattccaggcca
gttctcatggttagaaaccattgctcagccttatttataatagccagaag
ctggaaataacccagatataactcagcagaagaatggatacagaaaatgt
ggtacatttaaacaatggagcactactcagctattaaaaacaatgaattt
atgaaattcttaggcaaatggatggatctgcaggatatcaacctgagtga
ggtaacctaatcacaaaagaacacacatgatatgcactcactggtaagtg
gatatatgccttttggcttgctcatcatagctcttacttagcctgcttac
ttatagactccagggccaccagctcaaggtagtcccactgtcaatgggct
tggacagtggaagacagtgtgtcgggcttcctacctagagagttcttccc
attctcaaaggagaagagataggagaaaagggggaagaatctgtgagggt
gtactgggaggactggggtctgacattgggatttaaagtgaataaataaa
taaatttaataaaatgatataattatatttattctttgattttaaatttg
ttttgaggagggtttttaaaatatgaagttgggggcatacagaagtaagg
tagatttggaaagagtgggggaggagcatgtgataaaatattctttaagg
ataaaaaaatgattggggggtgggaagattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100843818_100845049
seq2: B6Ng01-120F14.b_48_1247 (reverse)

seq1  AAAACTTGGTGGAAGGAACAGGGAGCAGAGTGCTC-AGATCTTGAAACAC  49
      |||||||||||      | |  || |  ||||||| ||||||      ||
seq2  AAAACTTGGTG------AGACCGA-CCCAGTGCTCGAGATCT-----GAC  38

seq1  AAACAGCAGAGATAGCAAACTCGAATTTGGATGAACCTTTAAGTTCTTAA  99
       ||||||||| ||||| |||||||  ||||||||||||||| ||   |||
seq2  CAACAGCAGA-ATAGC-AACTCGA--TTGGATGAACCTTTAGGT--CTAA  82

seq1  AGTCCACTCACACCTTTACGACGCACTTCCTCCAGCTAGACC-ACATTTT  148
      ||||||||| |  | ||||||| ||||  || |||||||||| |||||||
seq2  AGTCCACTCCCCACCTTACGACCCACT--CT-CAGCTAGACCAACATTTT  129

seq1  TTAAAACCTCCCTAAACAATTCCATCAAGTGTTGGTAATATATGCAAATA  198
      |   ||||| ||||||||  |||||| |||||| ||||||||||||||||
seq2  T---AACCT-CCTAAACA--TCCATC-AGTGTT-GTAATATATGCAAATA  171

seq1  CTACAGCATGTGAGGAGCATTGTCTTTCAAGACACTACCCATATTTAAGA  248
      ||||||||||||| ||||| |||| |||||||||||||||||||||||||
seq2  CTACAGCATGTGA-GAGCA-TGTC-TTCAAGACACTACCCATATTTAAGA  218

seq1  TACACCATAAACAGTGTAACTTAATCAGCTGTGTTAGAACACTCACTTTA  298
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  TACACCATAAACAGTGT-ACTT-ATCAGCTGTGTTAGAACACTCACTTTA  266

seq1  CATGGATATTTCAGAATGAGAGTCTTTTTCATGGAAAATACTTTCTCAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATATTTCAGAATGAGAGTCTTTTTCATGGAAAATACTTTCTCAGG  316

seq1  AAATGTTCCAAGTGGTTCCCTTCAACCCCCTTTTCTATTTTTCTTTTTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCCAAGTGGTTCCCTTCAACCCCCTTTTCTATTTTTCTTTTTTC  366

seq1  TTTTCAAGATAAGCAGAGAGAAATCTGGGAATGTCTATAACCAGAAATAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGATAAGCAGAGAGAAATCTGGGAATGTCTATAACCAGAAATAA  416

seq1  ATTGAGTACATGATCCATTGAGCTCTCTTTCTCAACCTCTTAACTTGTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTACATGATCCATTGAGCTCTCTTTCTCAACCTCTTAACTTGTTT  466

seq1  CTGACACATAAGTTCATGTTTGTTGGAAATTTGTTGAGCTCTCTCTCTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACATAAGTTCATGTTTGTTGGAAATTTGTTGAGCTCTCTCTCTCT  516

seq1  CAACATTTTGTTTCTGACACATAACTTCCTGTTTGTTGGTCTCACTAACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTTGTTTCTGACACATAACTTCCTGTTTGTTGGTCTCACTAACA  566

seq1  AGTAGAGAAGAACTAGTTGATAGACACACTACACTGAATGAAATAAAATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGAAGAACTAGTTGATAGACACACTACACTGAATGAAATAAAATA  616

seq1  AAGAGGTCAAGTGTGCAGTACTTCAGGGGTCTCTAGTGTTTATGTTTTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTCAAGTGTGCAGTACTTCAGGGGTCTCTAGTGTTTATGTTTTGA  666

seq1  AATTTAAATCTGTTCATTTTTTAATGTCACTGGAGAAAAAAATTAAAACA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAATCTGTTCATTTTTTAATGTCACTGGAGAAAAAAATTAAAACA  716

seq1  TATGTATTTTTTCTTAGAACAGAAGTATAAAATACTTCATGTAAATTTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTTTTTCTTAGAACAGAAGTATAAAATACTTCATGTAAATTTTA  766

seq1  CTTTAAAAAATACCTGGTATATAAAAAATTGAATTTTTCTGTATACTGGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAAAATACCTGGTATATAAAAAATTGAATTTTTCTGTATACTGGT  816

seq1  TCAAAAAAGACATGGTTCTGAAAAGATAACAAATTGCAGAACTTGATAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAGACATGGTTCTGAAAAGATAACAAATTGCAGAACTTGATAAA  866

seq1  CATGTACACAATATAATAAATAAAACAAAAAAGCTGAATGAAAATGTTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACACAATATAATAAATAAAACAAAAAAGCTGAATGAAAATGTTTA  916

seq1  GATGCCTGTGAGAGTTTTTTATGTCACAAACTGACACCACAAATTGAAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTGTGAGAGTTTTTTATGTCACAAACTGACACCACAAATTGAAAG  966

seq1  TCACAAAGCATATTTCCTTACTATTCCTTGACATTTCATGTTATTTAAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGCATATTTCCTTACTATTCCTTGACATTTCATGTTATTTAAAA  1016

seq1  TTACTCTAATACGATTTTTAATTAAAAAAATCTTTTGTGTTCCTTTTAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTAATACGATTTTTAATTAAAAAAATCTTTTGTGTTCCTTTTAAA  1066

seq1  TAATGCTGTCTGTATTGCATGCAATTAATATAGCCTTGACATAATATGCA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTGTCTGTATTGCATGCAATTAATATAGCCTTGACATAATATGCA  1116

seq1  TATTTATTTTGCATCATTTTGAACTTCATCTAGAATTTTATTGGATAAAT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTGCATCATTTTGAACTTCATCTAGAATTTTATTGGATAAAT  1166

seq1  TTAATTTGTTTTATGACTCTAGGCAGATGAATTC  1232
      ||||||||||||||||||||||||||||||||||
seq2  TTAATTTGTTTTATGACTCTAGGCAGATGAATTC  1200

seq1: chr10_100715493_100716479
seq2: B6Ng01-120F14.g_68_1049

seq1  GAATTCTATGCTGATTGAGAATACAAAACTGTAAGAAACAGAAGTGGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCTGATTGAGAATACAAAACTGTAAGAAACAGAAGTGGTAG  50

seq1  ATTATTCAAAGGCAACAGCATTATCCATAAACAAAAAGAGTGTTATGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCAAAGGCAACAGCATTATCCATAAACAAAAAGAGTGTTATGCAA  100

seq1  TTGAACTCACAATGACTGTGATAGTATACACAAAATCTGCACAAGTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCACAATGACTGTGATAGTATACACAAAATCTGCACAAGTTCTC  150

seq1  ATAAGACAAGTCCTTAGTACTAATAAAAGGACATGGGTTGAAATCCCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAAGTCCTTAGTACTAATAAAAGGACATGGGTTGAAATCCCCAT  200

seq1  TTGTAACTGAAACGCTGTTTGCAATTGATCTCTACTGGATGTGAAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACTGAAACGCTGTTTGCAATTGATCTCTACTGGATGTGAAAAAAG  250

seq1  TTAATTTTTCCAAGTAAAGGTCCAAGAGAAGGTCACCACATTCCAGGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTCCAAGTAAAGGTCCAAGAGAAGGTCACCACATTCCAGGCCA  300

seq1  GTTCTCATGGTTAGAAACCATTGCTCAGCCTTATTTATAATAGCCAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCATGGTTAGAAACCATTGCTCAGCCTTATTTATAATAGCCAGAAG  350

seq1  CTGGAAATAACCCAGATATAACTCAGCAGAAGAATGGATACAGAAAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATAACCCAGATATAACTCAGCAGAAGAATGGATACAGAAAATGT  400

seq1  GGTACATTTAAACAATGGAGCACTACTCAGCTATTAAAAACAATGAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATTTAAACAATGGAGCACTACTCAGCTATTAAAAACAATGAATTT  450

seq1  ATGAAATTCTTAGGCAAATGGATGGATCTGCAGGATATCAACCTGAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTCTTAGGCAAATGGATGGATCTGCAGGATATCAACCTGAGTGA  500

seq1  GGTAACCTAATCACAAAAGAACACACATGATATGCACTCACTGGTAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCTAATCACAAAAGAACACACATGATATGCACTCACTGGTAAGTG  550

seq1  GATATATGCCTTTTGGCTTGCTCATCATAGCTCTTACTTAGCCTGCTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGCCTTTTGGCTTGCTCATCATAGCTCTTACTTAGCCTGCTTAC  600

seq1  TTATAGACTCCAGGGCCACCAGCTCAAGGTAGTCCCACTGTCAATGGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGACTCCAGGGCCACCAGCTCAAGGTAGTCCCACTGTCAATGGGCT  650

seq1  TGGACAGTGGAAGACAGTGTGTCGGGCTTCCTACCTAGAGAGTTCTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGTGGAAGACAGTGTGTCGGGCTTCCTACCTAGAGAGTTCTTCCC  700

seq1  ATTCTCAAAGGAGAAGAGATAGGAGAAAAGGGGGAAGAATCTGTGAGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAAAGGAGAAGAGATAGGAGAAAAGGGGGAAGAATCTGTGAGGGT  750

seq1  GTACTGGGAGGACTGGGGTCTGACATTGGGATTTAAAGTGAATAAATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGGAGGACTGGGGTCTGACATTGGGATTTAAAGTGAATAAATAAA  800

seq1  TAAATTTAATAAAATGATATAATTATATTTATTCTTTGATTTTAAATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAATAAAATGATATAATTATATTTATTCTTTGATTTTAAATTTG  850

seq1  TTTTGAGGAGGGTTTTTAAAATATGAAGTTGGGTGCATACAGAAGTAAGG  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTGAGGAGGGTTTTTAAAATATGAAGTTGGGGGCATACAGAAGTAAGG  900

seq1  TAGATTTGGAAAGAGTTGGGGGAGGAGCATGTTGATAAAATATATCTTAA  950
      ||||||||||||||| ||||||||||||||| |||||||||||   ||||
seq2  TAGATTTGGAAAGAG-TGGGGGAGGAGCATG-TGATAAAATATTCTTTAA  948

seq1  GAATTAAAAAAAATTGATT-GGGGGTGGGAAGAATTTA  987
      | ||   |||||| ||||| |||||||||||| |||||
seq2  GGAT---AAAAAAATGATTGGGGGGTGGGAAG-ATTTA  982