BAC Information

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BAC

Clone NameB6Ng01-120L16
Chromosome10 (Build37)
Map Location 26,534,638 - 26,721,670
singlet/doubletdoublet
Overlap geneArhgap18, Lama2
Upstream geneLOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3, L3mbtl3, LOC435208, LOC667572, LOC100040349
Downstream geneLOC100040385, LOC100040961
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120L16.bB6Ng01-120L16.g
ACCDH924597DH924598
length1,152262
definitionDH924597|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L16, 5' end.DH924598|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,720,519 - 26,721,670)(26,534,638 - 26,534,898)
sequence
gaattcctgcaatctaagctctcaggaggatagtttgtcccctagcaaga
agataatagctagcacaaaccaagacacaaagagccaaactaaaagcaac
ccatactgtgccaaactcacagatccttatctgattagccattgctatac
agccctgcagccgctcctcttgcagaatgtgtgtagagctgcacacctgt
tttgccacctgcatctgagacacatgacatagctgtgcaattgctgagtt
tcaatgaactttccatccaagttaatgagcaaggctttgtgtcaaggtcc
taagcatgcaatctgggccatctcagaagctatgggaggtcagagtgcca
taggacagacgtggcagtaaaattctagctgttgatgagctgagaaatca
tgagttcaaagctaggttaagttatgtatctagacctgttctcaacatta
aaaataataatgccatagtagaaaaataaattcctgggaacagagagtgt
gggtggtaggaaagatatttctaatggtattgagtatctgttgtttttaa
atgttttatcagcatcttcactgttcaaattgatgaagacagaagacata
tgcaaaacctgacagaggaacagcccatcgaagtgaaaaagctctttgtc
gggggtgctcctcctgaatttcagccctccccactcaggaatattccggc
ctttcaaggctgtgtgtggaaccttgttattaactccatgtaagtgactc
gcatttctgctgcccttttgctttataatttagtaggaaggtccctgtgg
catccacattatctaaaactgtgataggaaaaaggctacgaataccttta
acttagacctggaattctaccctggccatttcaaggcagggttgggggac
taatttaaatgtgaaggaaaaaaaaaagcaatgaataaaataagataaac
tttcatttgattttattttattttattagccccatggactttgcgcagcc
tatagccttcaaaatgccgacatttggccgctgtacctatcaaagctccg
ggaagatgagagtgaagcccagttccagctcgaggttattgtccagacct
acagccgggtccaccccctgcctcctttcccgccccacatgggggcatgt
aa
tctgagttttgcatttagtaaactgcggagttattgggctccagtgattc
acagtgcaactttcaatccattcactacaggaagctcagtggctcttagg
gttgttccgtgagtgagcttggacaatggtagaagtttggagggtagaat
gatggacgtttttgtggtgaggggattagggaaagagagaagttgatcct
gggtgacaattgtgcagacagggttctgtcttcagagtcacacagttctc
tttgcaccagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26720519_26721670
seq2: B6Ng01-120L16.b_48_1199 (reverse)

seq1  TTACATGCACCATGGTGGGGGCCGGGAAAGGGAAGGCAGGGGTGGGCACC  50
      |||||||| ||   ||||||  |||||||||  |||||||||  ||  ||
seq2  TTACATGCCCCCATGTGGGG--CGGGAAAGG--AGGCAGGGGGTGGACCC  46

seq1  GGCTG-AGG-CTGGACAATAACTTC-AGCTGGAACT--GCTTCACTCTCA  95
      ||||| ||| |||||||||||| || ||||||||||  ||||||||||||
seq2  GGCTGTAGGTCTGGACAATAACCTCGAGCTGGAACTGGGCTTCACTCTCA  96

seq1  TCTTCCCGGGGCTTTTGATAGGTACAGCGGCC-AATGTCGGCATTTTTGA  144
      ||||||||| || ||||||||||||||||||| |||||||||| ||||||
seq2  TCTTCCCGGAGC-TTTGATAGGTACAGCGGCCAAATGTCGGCA-TTTTGA  144

seq1  AGGCTATAGGCTGCGCAAAGTCCATGGGGCTAATAAAATAAAATAAAATC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATAGGCTGCGCAAAGTCCATGGGGCTAATAAAATAAAATAAAATC  194

seq1  AAAATGAAAGTTTATCTTATTTTATTCATTGCTTTTTTTTTTCCTTCACA  244
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAATGAAAGTTTATCTTATTTTATTCATTGCTTTTTTTTTTCCTTCACA  243

seq1  TTTAAATTAGT-CCCCAACCCTGCCTTGAAATGGCCAGGGTAGAATTCCA  293
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTAGTCCCCCAACCCTGCCTTGAAATGGCCAGGGTAGAATTCCA  293

seq1  GGTCTAAGTTAAAGGTATTCGTAGCCTTTTTCCTATCACAGTTTTAGATA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAAGTTAAAGGTATTCGTAGCCTTTTTCCTATCACAGTTTTAGATA  343

seq1  ATGTGGATGCCACAGGGACCTTCCTACTAAATTATAAAGCAAAAGGGCAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGATGCCACAGGGACCTTCCTACTAAATTATAAAGCAAAAGGGCAG  393

seq1  CAGAAATGCGAGTCACTTACATGGAGTTAATAACAAGGTTCCACACACAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGCGAGTCACTTACATGGAGTTAATAACAAGGTTCCACACACAG  443

seq1  CCTTGAAAGGCCGGAATATTCCTGAGTGGGGAGGGCTGAAATTCAGGAGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAAGGCCGGAATATTCCTGAGTGGGGAGGGCTGAAATTCAGGAGG  493

seq1  AGCACCCCCGACAAAGAGCTTTTTCACTTCGATGGGCTGTTCCTCTGTCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCCCGACAAAGAGCTTTTTCACTTCGATGGGCTGTTCCTCTGTCA  543

seq1  GGTTTTGCATATGTCTTCTGTCTTCATCAATTTGAACAGTGAAGATGCTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGCATATGTCTTCTGTCTTCATCAATTTGAACAGTGAAGATGCTG  593

seq1  ATAAAACATTTAAAAACAACAGATACTCAATACCATTAGAAATATCTTTC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACATTTAAAAACAACAGATACTCAATACCATTAGAAATATCTTTC  643

seq1  CTACCACCCACACTCTCTGTTCCCAGGAATTTATTTTTCTACTATGGCAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACCCACACTCTCTGTTCCCAGGAATTTATTTTTCTACTATGGCAT  693

seq1  TATTATTTTTAATGTTGAGAACAGGTCTAGATACATAACTTAACCTAGCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTTTAATGTTGAGAACAGGTCTAGATACATAACTTAACCTAGCT  743

seq1  TTGAACTCATGATTTCTCAGCTCATCAACAGCTAGAATTTTACTGCCACG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCATGATTTCTCAGCTCATCAACAGCTAGAATTTTACTGCCACG  793

seq1  TCTGTCCTATGGCACTCTGACCTCCCATAGCTTCTGAGATGGCCCAGATT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTATGGCACTCTGACCTCCCATAGCTTCTGAGATGGCCCAGATT  843

seq1  GCATGCTTAGGACCTTGACACAAAGCCTTGCTCATTAACTTGGATGGAAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTAGGACCTTGACACAAAGCCTTGCTCATTAACTTGGATGGAAA  893

seq1  GTTCATTGAAACTCAGCAATTGCACAGCTATGTCATGTGTCTCAGATGCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTGAAACTCAGCAATTGCACAGCTATGTCATGTGTCTCAGATGCA  943

seq1  GGTGGCAAAACAGGTGTGCAGCTCTACACACATTCTGCAAGAGGAGCGGC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAAAACAGGTGTGCAGCTCTACACACATTCTGCAAGAGGAGCGGC  993

seq1  TGCAGGGCTGTATAGCAATGGCTAATCAGATAAGGATCTGTGAGTTTGGC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGCTGTATAGCAATGGCTAATCAGATAAGGATCTGTGAGTTTGGC  1043

seq1  ACAGTATGGGTTGCTTTTAGTTTGGCTCTTTGTGTCTTGGTTTGTGCTAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATGGGTTGCTTTTAGTTTGGCTCTTTGTGTCTTGGTTTGTGCTAG  1093

seq1  CTATTATCTTCTTGCTAGGGGACAAACTATCCTCCTGAGAGCTTAGATTG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATCTTCTTGCTAGGGGACAAACTATCCTCCTGAGAGCTTAGATTG  1143

seq1  CAGGAATTC  1152
      |||||||||
seq2  CAGGAATTC  1152

seq1: chr10_26534638_26534898
seq2: B6Ng01-120L16.g_72_333

seq1  TCTGAGTTTTGCATTTAGTAAACTGCGGAGTTATTGGGCTCCAGTGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTTTGCATTTAGTAAACTGCGGAGTTATTGGGCTCCAGTGATTC  50

seq1  ACAGTGCAACTTTCAATCCATTCACTACAGGAAGCTCAGTGGCTCTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCAACTTTCAATCCATTCACTACAGGAAGCTCAGTGGCTCTTAGG  100

seq1  GTTGTTCCGTGAGTGAGCTTGGACAATGGTAGAAGTTTGGAGGGTAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCCGTGAGTGAGCTTGGACAATGGTAGAAGTTTGGAGGGTAGAAT  150

seq1  GATGGACGTTTTTGTGGTGAGGGGATTAGGGAAAGAGAGAAGTTGATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACGTTTTTGTGGTGAGGGGATTAGGGAAAGAGAGAAGTTGATCCT  200

seq1  GGGTGACAATTGTGCAGACAGGGTTCTGTCTGCAGAGTCACACAGTTCTC  250
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGGTGACAATTGTGCAGACAGGGTTCTGTCTTCAGAGTCACACAGTTCTC  250

seq1  -TTGCACCAGAG  261
       |||||||||||
seq2  TTTGCACCAGAG  262