BAC Information

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BAC

Clone NameB6Ng01-121C21
Chromosome10 (Build37)
Map Location 112,288,963 - 112,443,194
singlet/doubletdoublet
Overlap gene4921506J03Rik
Upstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2, LOC100042639
Downstream geneLOC100042655, LOC100042666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121C21.bB6Ng01-121C21.g
ACCDH924928DH924929
length683994
definitionDH924928|Mus musculus domesticus DNA, BAC clone: B6Ng01-121C21, 5' end.DH924929|Mus musculus domesticus DNA, BAC clone: B6Ng01-121C21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,442,651 - 112,443,194)(112,288,963 - 112,289,949)
sequence
gaattctttcatggagaaagttgtctcccttattcctcctgtggagcatt
cctttgagaattttccagagtagtgacttgcttgccatgaattaatttaa
ttcacatgtatcctttcatatctttatttctccatcattcttgaaagata
acactacggggtgaagaattctttgttcacaattattcaattcacaacct
gaattatattataaactgataatttgaagggagatcaaaatatccatggg
ataagatacagagacaaagtgtggagcaaagactgaaagaaaggccattt
agagacagccccacctggggatccatcccagaaacatttaccaaacccag
acactattgtggatgccaacaagtgcttcctgacaggagcctgatagagc
tgtctcctaagaggctctgccagtgcctgagaaatacagaagttgatgct
tacagccaaccaatggactgagcacagggttctcaatggaggagctagag
aaagctcccaagaagatgaaggggtttacagcctccagaggagtaacaat
atgaaccaaccagttaaccctagagctcccaaggactaaaccatgaacca
aagaaaacatatggagggacccatggctccagccacatattgtagcagaa
gatggccttctgagacatcagtgagaggagagg
gaattctgttcaaagaatggattttcaggactttatgtggaaccttgacg
tgaagtgaaagatctttgagagggaaagttgacagttactgagtgagcta
atatatgttaaaaacgcttctagagtaaaactacttcagtcatatatata
tattccaaaaattttatccaataacaaaagacttgttatgggacatccat
tatatataaaacactgaaccgtggaacatgtccttgtcaggggctgtata
gatgggtaagtggttaagagcacttgtggtttttgtagaggaactgggat
tgataccaacacccacaaccacccacaactccaaatccagaagacccaac
aacctcatttttttttctcagataccaggggcattatacatacatatgtg
caagcaaaatacttatacaaataaaatctaaaaatcatttaatgtgatat
tatgtttgatacaggatgcatattactcaataaatttatgagaaagcaat
taatatactttctcagagtaaaaccactagagggcaagttctgaatatat
tttatccatttgaatacctgttatatttaactttaatacattcaataata
catttaatatgattttagagggatagtggaaaggtacaattcacagctgg
aagagatctcatatgattcataaatagtataatgtgaaagtgaaatcata
tttcttttttatcctgcttactctaaaggtttactgaattctaagtacca
gtaagaaaaataagccctctttagggaagggttttacacaataccaaaat
atttataggagtatttattgtacttacaattgttgtttgggatgagtttg
gtttagcagctgaaatatccaacaatttcacagtgaatatttttacagcc
tgtcccttgacatacatcactatggctttcttagaacacaaattatttaa
acatgcattaaatcccttgcttgtctatcaggaaatacttatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_112442651_112443194
seq2: B6Ng01-121C21.b_43_585 (reverse)

seq1  CTCCTCTGGAGGCTGTAAACCCCTTCATCTTCTTGGGAGCTTTCTCTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGGAGGCTGTAAACCCCTTCATCTTCTTGGGAGCTTTCTCTAGC  50

seq1  TCCTCCATTGAGAACCCTGTGCTCAGTCCATTGGTTGGCTGTAAGCATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATTGAGAACCCTGTGCTCAGTCCATTGGTTGGCTGTAAGCATCA  100

seq1  ACTTCTGTATTTCTCAGGCACTGGCAGAGCCTCTTAGGAGACAGCTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTATTTCTCAGGCACTGGCAGAGCCTCTTAGGAGACAGCTCTAT  150

seq1  CAGGCTCCTGTCAGGAAGCACTTGTTGGCATCCACAATAGTGTCTGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCCTGTCAGGAAGCACTTGTTGGCATCCACAATAGTGTCTGGGTT  200

seq1  TGGTAAATGTTTCTGGGATGGATCCCCAGGTGGGGCTGTCTCTAAATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATGTTTCTGGGATGGATCCCCAGGTGGGGCTGTCTCTAAATGGC  250

seq1  CTTTCCTTCAGTCTTTGCTCCACACTTTGTCTCTGTATCTTATCCCATGG  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCAGTCTTTGCTCCACACTTTGTCTCTGTATCTTATCCCATGG  300

seq1  ATATTTTGATCTCCCTTCAAATTATCAGTTTATAATATAATTCAGGTTCT  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATATTTTGATCTCCCTTCAAATTATCAGTTTATAATATAATTCAGGTTGT  350

seq1  GAATTGAATAATTGTGAACAAAGAATTCTTCACCCCGTAGTGTTATCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAATAATTGTGAACAAAGAATTCTTCACCCCGTAGTGTTATCTTT  400

seq1  CAAGACTGATGGAGAAATAAAGATATGAAAGGATACATGTGAATTAAATT  450
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATGATGGAGAAATAAAGATATGAAAGGATACATGTGAATTAAATT  450

seq1  AATTCATGGCAAGCAAGTCACTACTCTGGAAAATTCTCAAAGGAATGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AATTCATGGCAAGCAAGTCACTACTCTGGAAAATTCTCAAAGGAATGCTC  500

seq1  CACAGGAGGAATAAGAAAGACAACTTTCTCCATGGAAAGAATTC  544
      |||||||||||||||  |||||||||||||||| ||||||||||
seq2  CACAGGAGGAATAAGGGAGACAACTTTCTCCAT-GAAAGAATTC  543

seq1: chr10_112288963_112289949
seq2: B6Ng01-121C21.g_78_1058

seq1  AGAATGGATTTTCAGGACTTTATGTAGAACCTTGACCAAGATGTTTAATT  50
      ||||||||||||||||||||||||| ||||||||| |  || ||  ||  
seq2  AGAATGGATTTTCAGGACTTTATGTGGAACCTTGA-CGTGAAGTGAAAGA  49

seq1  TCTTTGAGAGTCAAATTTTACAGTTACTAAGTGAGCTAATATATGTTAAA  100
      ||||||||||  ||| || ||||||||| |||||||||||||||||||||
seq2  TCTTTGAGAGGGAAAGTTGACAGTTACTGAGTGAGCTAATATATGTTAAA  99

seq1  AACACTTCTAGAGTAAAACTACTTCAGTCATATATATATATTCCAAAAAT  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTTCTAGAGTAAAACTACTTCAGTCATATATATATATTCCAAAAAT  149

seq1  TTTATCCAATAACAAAAGAGTTATTATGGGACATCCATTATATATAAAGC  200
      ||||||||||||||||||| || ||||||||||||||||||||||||| |
seq2  TTTATCCAATAACAAAAGACTTGTTATGGGACATCCATTATATATAAAAC  199

seq1  ACTGAACCGTTAAACATGTCATTGTCAGGGGCTGTAGAGATGGCTAAGTG  250
      ||||||||||  |||||||| ||||||||||||||| |||||| ||||||
seq2  ACTGAACCGTGGAACATGTCCTTGTCAGGGGCTGTATAGATGGGTAAGTG  249

seq1  GTTAAGAGCACTTGTGGTTTTTGTAGAGGAACTGGGATTGATACCAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGAGCACTTGTGGTTTTTGTAGAGGAACTGGGATTGATACCAACAC  299

seq1  CCACAACCACCCACAACTCCAAATCCAGAAGACCCAACAACCTCATTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  CCACAACCACCCACAACTCCAAATCCAGAAGACCCAACAACCTCATTTTT  349

seq1  ATTTCTCAGATACCAGGGGCATTATACATACATATGTGCAAGCAAAATAC  400
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAGATACCAGGGGCATTATACATACATATGTGCAAGCAAAATAC  399

seq1  TTATACAAATAAAATCTAAAAATCATTTAATGTGATATTATGTTTGATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAAATAAAATCTAAAAATCATTTAATGTGATATTATGTTTGATAC  449

seq1  AGGATGCATATTACTCAATAAATTTATGAGAAAGCAATTAATATACTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCATATTACTCAATAAATTTATGAGAAAGCAATTAATATACTTTC  499

seq1  TCAGAGTAAAACCACTAGAGGGCAAGTTCTGAATATATTTTATCCATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTAAAACCACTAGAGGGCAAGTTCTGAATATATTTTATCCATTTG  549

seq1  AATACCTGTTATA-TTAACTTTAATACATTCAATAATACATTTAATATGA  599
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AATACCTGTTATATTTAACTTTAATACATTCAATAATACATTTAATATGA  599

seq1  TTTTAGAGGGATAGTGGAAAGGTACAATTCACAGCTGGAAGAGATCTCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAGGGATAGTGGAAAGGTACAATTCACAGCTGGAAGAGATCTCAT  649

seq1  ATGATTCATAAATAGTATAATGTGAAAGTGAAATCATATTTC-TTTTTAT  698
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATGATTCATAAATAGTATAATGTGAAAGTGAAATCATATTTCTTTTTTAT  699

seq1  CCTGCTTACTCTAAAGGTTTACTGAATTCTAAGTACCAGTAAGAAAAATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTACTCTAAAGGTTTACTGAATTCTAAGTACCAGTAAGAAAAATA  749

seq1  AGCCCTCTTTAGGGAAGGGTTTTACACAATACCAAAATATTTATAGGAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGCCCTCTTTAGGGAAGGGTTTTACACAATACCAAAATATTTATAGGAG-  798

seq1  TATTTATTGTACTTAC-ATTGTTGTTT-GGATGAGTTTGGTTTAGCAGCT  846
      |||||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  TATTTATTGTACTTACAATTGTTGTTTGGGATGAGTTTGGTTTAGCAGCT  848

seq1  GAAATATCCAACCAATTTCCACAGTG-ATATTTTTACAGCCTGTTCCCTT  895
      ||||||||||| |||||| ||||||| |||||||||||||||| ||||||
seq2  GAAATATCCAA-CAATTT-CACAGTGAATATTTTTACAGCCTG-TCCCTT  895

seq1  GTACATTACATCACTATGGCATTTCCTTAGACACA-AAATTATTTTAAAC  944
      | ||| ||||||||||||||  || |||||| ||| |||||| |||||||
seq2  G-ACA-TACATCACTATGGC--TTTCTTAGA-ACACAAATTA-TTTAAAC  939

seq1  ATGCATTAAATCCCTTGCTTGTCTATCATGTAAATACTTATGG  987
      |||||||||||||||||||||||||||| | ||||||||||||
seq2  ATGCATTAAATCCCTTGCTTGTCTATCA-GGAAATACTTATGG  981