BAC Information

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BAC

Clone NameB6Ng01-121D03
Chromosome10 (Build37)
Map Location 32,926,186 - 32,970,359
singlet/doubletdoublet
Overlap geneTrdn
Upstream geneTcba1, EG667761
Downstream geneA330019N05Rik, LOC100040686, EG215895, LOC100041399, Sult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik, Dse
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121D03.bB6Ng01-121D03.g
ACCDH924940DH924941
length1,1341,201
definitionDH924940|Mus musculus domesticus DNA, BAC clone: B6Ng01-121D03, 5' end.DH924941|Mus musculus domesticus DNA, BAC clone: B6Ng01-121D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,926,186 - 32,926,751)(32,969,097 - 32,970,359)
sequence
gaattctttcaatcttcttgtatctgttgaggcctggtcagttttggaga
aggtaccatgaagtgctgagaagttatattcttttgcccaggaaaggtat
tgctggatcttctggtaatactatgtccaattttctgaggaactgccaaa
ctaatttccagagtggttgtaccagcttgcaatcccaccagcaatggagg
agttttcctctttctccacatccttgccagcatctgctgtcccctgaaat
tctctcttctatctcttgtattctgttggtgatgcttgtatctatgactc
ctgttctctttcctaggttttctatttccagggtcatctctctttgtgat
ttctttattctttctaaaatggaaatttttttagtttctatatggttttg
ttcaattccttcacctgtttgtgtttttctgtatttctttgagggattta
tatgtttcctctttaaggacttctacctgtgtatctgtgttctattgtgt
ttctttaagggagttatttatgcctttcttaaagtcttctatcatcacca
tgagatgtgattttaaattagaatcttgattttatagtgttttagtgtat
ccaggacttattgtggtggaagaactgggttctgatgatgacaagttgcc
ttgacttctgttgcttatgttcttgtgctttcctcttgctatatagttat
ctctggtgttagcttgtcttgctgtaattatagcttgtctctactgttag
tttgtggtcttaggcatctcagcactcctggaagaacaactctctcctgg
tagaatttgggtacagagagctgtggcatagaaactggaaggttcttgtc
ccaggctgctttgtgtttcctttgtcctgtgcgctcctggcaggtcccac
ttgggcaaggtatttgagcaatggtggtggtcttacctttgatctatttg
tctgcactcttgggaggcagcactctctggatgaaatcacatacagagtg
ctgtggcacaggtagctctgggtaagatgaaagtccatttctttatgcac
tactctagatgtgaattgacctgtgcacattgggtcatgtttatcatcta
gaacatgggattgtatgaagactgagttccatag
gaattcaaggggaagaataatttcaaatagtttagttcacaaaatatcat
taaaaacgtaatttttaaaataaaaagatatttcctaaacattttaaaat
tatagagagcttttaaataactgattgtaataatattggatgtgttgtaa
ttataaaaatgaaagtttccacatttgtttgtttgtttgtttgtagacaa
ttatgagtcaataaaagaaactgggtatggaaagtgacgccctaaatttt
acactccccttatgggttttaaatataaaaaggaaaatgctcaattaaaa
tttgtttgatttgttccaaaacacatagctgccagtagaactgcatatat
tttatcaagcaacactataatgtctgttagttccttttttatttgcttca
taatgctgttattctgagattctctttttaaacagtttaggttttatgca
gaatcattacttccacaagatgtgttgtaaacattgatgctgttttgttc
ttttgttagaaaatgaaaaataaacacaacatactttcctaacagtgttt
cattttcaccatcatgtcacctaaatgagattactttttctgaatttcct
tatatgttcttctacattttcctgtacttgcatgtggactgtgaatgtcc
ttcattgtgtttgaaatcttaagaacaccaagatgcattaaaattttcag
tttttccttctcatcactaatgtgttgcttttaagggttaaagttggtta
taactaaaagtaaaaattcacagatattgtcagttttatcaatagaaccc
tgaaaactttggatttgatttattcaaatatattagagattcaatagtta
tttcccatacatagaattgactgtagaattaccaacagtaccagtaggtt
ggtcatatttataagactagtttgtaattgaagcctttcatttttaaaat
tcacatatgatattacttctaaagtcgagattgaaagctatgtagactca
aatttcatgtatagtatgtcttagttgtcagtcactcatttacttatagc
tacatactcacatctcatataattagtatgcttgagtaggaatatattaa
ttcttacccctctgacataagattggtccgagtagttcaacttcccttag
cgaatgcgtattactttacgctcagctctaaccattcggacagaaataat
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32926186_32926751
seq2: B6Ng01-121D03.b_640_1179

seq1  GTGTATCCAGGACTTATTGTGGTGGAAGAACTGGGTTCTGATGATGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATCCAGGACTTATTGTGGTGGAAGAACTGGGTTCTGATGATGACAA  50

seq1  GTTGCCTTGACTTCTGTTGCTTATGTTCTTGTGCTTTCCTCTTGCTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTTGACTTCTGTTGCTTATGTTCTTGTGCTTTCCTCTTGCTATAT  100

seq1  AGTTATCTCTGGTGTTAGCTTGTCTTGCTGTAATTATAGCTTGTCTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCTCTGGTGTTAGCTTGTCTTGCTGTAATTATAGCTTGTCTCTAC  150

seq1  TGTTAGTTTGTGGTCTTAGGCATCTCAGCACTCCTGGAAGAACAACTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTTTGTGGTCTTAGGCATCTCAGCACTCCTGGAAGAACAACTCTC  200

seq1  TCCTGGTAGAATTTGGGTACAGAGAGCTGTGGCATAGAAACTGGAAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTAGAATTTGGGTACAGAGAGCTGTGGCATAGAAACTGGAAGGTT  250

seq1  CTTGTCCCAGGCTGCTTTGTGTTTCCTTTGTCCTGTGCGCTCCTGGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCCAGGCTGCTTTGTGTTTCCTTTGTCCTGTGCGCTCCTGGCAGG  300

seq1  TCCCACTTGGGCAAGGTATTTGAGCAATGGTGGTGGTCTTACCTTTGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTTGGGCAAGGTATTTGAGCAATGGTGGTGGTCTTACCTTTGATC  350

seq1  TTATTTTGTCTGCACTCTTGGGAGGCCAGCACTCTCTGGATGAAATCCAC  400
      |   ||||||||||||||||||||| |||||||||||||||||||| |||
seq2  T--ATTTGTCTGCACTCTTGGGAGG-CAGCACTCTCTGGATGAAAT-CAC  396

seq1  ATACAGAGTGCTGTGGCACAGGGTAAGCTCCTGGGTACAGATTGAAAGTC  450
      ||||||||||||||||||||||   |||| ||||||| ||| ||||||||
seq2  ATACAGAGTGCTGTGGCACAGG--TAGCT-CTGGGTA-AGA-TGAAAGTC  441

seq1  CATTTCTTTATGCACCTTACTTCCTAAGATTGTTGAAATGAACCTGTGGC  500
      |||||||||||||||  ||||  || ||||   |||| || |||||| ||
seq2  CATTTCTTTATGCAC--TACT--CT-AGAT--GTGAATTG-ACCTGT-GC  482

seq1  ACATTGGGTCATGTTTATCAATCTAGAAACCATGGGATTGATATGGAAGG  550
      ||||||||||||||||||| ||||||||  |||||||||| ||| |||| 
seq2  ACATTGGGTCATGTTTATC-ATCTAGAA--CATGGGATTG-TAT-GAAG-  526

seq1  AACATGAGTTCAATAG  566
       || ||||||| ||||
seq2  -AC-TGAGTTCCATAG  540

seq1: chr10_32969097_32970359
seq2: B6Ng01-121D03.g_68_1268 (reverse)

seq1  AATTATTTCTGTTCTGGGAAAATAGAATAAAGAAGCTTGGAGCTGTTTAC  50
      |||||||||||| |          ||||      | || ||||||     
seq2  AATTATTTCTGTCC----------GAAT------GGTTAGAGCTG-----  29

seq1  ACAGTGAAAAATACAGGGCATTTCAGCTAAGGGGGAATGTTTGACACTAC  100
        || | ||| ||    |||||   |||||  |||||   |||| |||||
seq2  --AGCGTAAAGTAATACGCATT--CGCTAA--GGGAA--GTTGA-ACTAC  70

seq1  TCGAACAAATCTTATGTCCAGAGGGTAAAGATATAAATTTATAATCCTAC  150
      ||| || |||||||||| |||||||  ||||  |||   |||| ||||||
seq2  TCGGACCAATCTTATGT-CAGAGGGGTAAGAATTAA---TATATTCCTAC  116

seq1  TCAAGCATACTTACATTATATGAGATGTTGAAGGTTATGTAGCTTATAAG  200
      |||||||||||   ||||||||||||||    |  |||||||| ||||||
seq2  TCAAGCATACT--AATTATATGAGATGT----GAGTATGTAGC-TATAAG  159

seq1  TAAAATGGAGTTGAACTTGACATACTAAGACATACTATAACATGAAAATT  250
      ||||   ||| |||   ||||| ||||||||||||||| ||||| |||||
seq2  TAAA--TGAG-TGA--CTGACA-ACTAAGACATACTAT-ACATG-AAATT  201

seq1  TGAGTTCTTACAATAGGCTTTCAATTCTCGACTTTAAGAAGTAATATCCA  300
      |||||   ||| ||| |||||||| |||||||||| ||||||||||||  
seq2  TGAGT--CTAC-ATA-GCTTTCAA-TCTCGACTTT-AGAAGTAATATC--  243

seq1  TTATGTGAATTTTTTAAAAATTGAAAGGCTTCAATTACAAACTAGTCTTA  350
       ||||||||||||   |||| |||||||||||||||||||||||||||||
seq2  ATATGTGAATTTT---AAAAATGAAAGGCTTCAATTACAAACTAGTCTTA  290

seq1  TAAATATGACCAACCTACTGGTACTGTTTGGTAATTCTACAGTCAATTCT  400
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAAATATGACCAACCTACTGGTACTG-TTGGTAATTCTACAGTCAATTCT  339

seq1  ATTGTATTGGAAATAACTATTGAATCTCTAATATATTTGAATAAATCAAA  450
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  A-TGTATGGGAAATAACTATTGAATCTCTAATATATTTGAATAAATCAAA  388

seq1  TCCAAAGTTTTCAGGGTTCTATTGATAAAACTGACAATATCTGTGAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGTTTTCAGGGTTCTATTGATAAAACTGACAATATCTGTGAATTT  438

seq1  TTACTTTTAGTTATAACCAACTTTAACCCTTAAAAGCAACACATTAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTAGTTATAACCAACTTTAACCCTTAAAAGCAACACATTAGTGA  488

seq1  TGAGAAGGAAAAACTGAAAATTTTAATGCATCTTGGTGTTCTTAAGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGAAAAACTGAAAATTTTAATGCATCTTGGTGTTCTTAAGATTT  538

seq1  CAAACACAATGAAGGACATTCACAGTCCACATGCAAGTACAGGAAAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACAATGAAGGACATTCACAGTCCACATGCAAGTACAGGAAAATGT  588

seq1  AGAAGAACATATAAGGAAATTCAGAAAAAGTAATCTCATTTAGGTGACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAACATATAAGGAAATTCAGAAAAAGTAATCTCATTTAGGTGACAT  638

seq1  GATGGTGAAAATGAAACACTGTTAGGAAAGTATGTTGTGTTTATTTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGAAAATGAAACACTGTTAGGAAAGTATGTTGTGTTTATTTTTCA  688

seq1  TTTTCTAACAAAAGAACAAAACAGCATCAATGTTTACAACACATCTTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAACAAAAGAACAAAACAGCATCAATGTTTACAACACATCTTGTG  738

seq1  GAAGTAATGATTCTGCATAAAACCTAAACTGTTTAAAAAGAGAATCTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATGATTCTGCATAAAACCTAAACTGTTTAAAAAGAGAATCTCAG  788

seq1  AATAACAGCATTATGAAGCAAATAAAAAAGGAACTAACAGACATTATAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAGCATTATGAAGCAAATAAAAAAGGAACTAACAGACATTATAGT  838

seq1  GTTGCTTGATAAAATATATGCAGTTCTACTGGCAGCTATGTGTTTTGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTGATAAAATATATGCAGTTCTACTGGCAGCTATGTGTTTTGGAA  888

seq1  CAAATCAAACAAATTTTAATTGAGCATTTTCCTTTTTATATTTAAAACCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAAACAAATTTTAATTGAGCATTTTCCTTTTTATATTTAAAACCC  938

seq1  ATAAGGGGAGTGTAAAATTTAGGGCGTCACTTTCCATACCCAGTTTCTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGGAGTGTAAAATTTAGGGCGTCACTTTCCATACCCAGTTTCTTT  988

seq1  TATTGACTCATAATTGTCTACAAACAAACAAACAAACAAATGTGGAAACT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACTCATAATTGTCTACAAACAAACAAACAAACAAATGTGGAAACT  1038

seq1  TTCATTTTTATAATTACAACACATCCAATATTATTACAATCAGTTATTTA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTTATAATTACAACACATCCAATATTATTACAATCAGTTATTTA  1088

seq1  AAAGCTCTCTATAATTTTAAAATGTTTAGGAAATATCTTTTTATTTTAAA  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCTCTATAATTTTAAAATGTTTAGGAAATATCTTTTTATTTTAAA  1138

seq1  AATTACGTTTTTAATGATATTTTGTGAACTAAACTATTTGAAATTATTCT  1250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACGTTTTTAATGATATTTTGTGAACTAAACTATTTGAAATTATTCT  1188

seq1  TCCCCTTGAATTC  1263
      |||||||||||||
seq2  TCCCCTTGAATTC  1201