BAC Information

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BAC

Clone NameB6Ng01-121H07
Chromosome10 (Build37)1 (Build37)
Map Location 104,053,911 - 104,054,36330,566,907 - 30,567,931
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121H07.bB6Ng01-121H07.g
ACCDH925134DH925135
length8371,004
definitionDH925134|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H07, 5' end.DH925135|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H07, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,911 - 104,054,363)(30,566,907 - 30,567,931)
sequence
gaattctcacctgaggaatgctgaatggctgagaaacgcctgaaaaaatg
ttcaatatccttaatcaccagggaaatgcaaatcaaaacaaccctgagat
tccacttcacactattcagaatggctaagatcaaaaattcaggtgacaac
agatgctggcgaggttttggagaaagaagtacactcctccattgctggtg
ggatttcaagctggtataaacactctggaaatcagtttagcggttcctca
aaaaattggacatagtactaccaaaagttccagcaatacctctcctgtgc
atatacccagaagatgttccaacttgtaataagaacacatgctctactat
gttcatagcagccttatttataatagccagaagctggaaagaacccaaat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagcaattaaaaacaatgaatttatgaaattcttaggcaa
atggatgtatctggaggatatcatcctgagttaggtaacccaaccacaaa
agaacacacatgacatgcacacacttacaaggctgtattagcccagaact
ttagaattcccaagatacaatttgcaaaatacatgaaactcaagacgaag
gaagaccagagtgtggatacttcgtttcttcttagaatggggtcataata
cccatggatggagttacagagacaaagttcagagcagagtctgtaggaat
gaccatccagagactgtcccacctgagaatccatcccataaacagccacc
aaacccagatactattgcatatgccagcgagattttg
gaattctctcctacaataacccatgatagcacttgcactgttactgtacc
cttggtaacatgtaatcatgttatgctgaagctgcaagggatgactttca
ggaaatacatatgactcattaacaaatagcatctcttttgtctcatttag
agcttgttaagatctggggttacacagagaagctctctgatttcttctcg
ttctccttctacttttcaataaattatttgcaatgatccatctattgtct
cttagttcatcacctcttttgggaatttgtatttgaattctatcactctc
ttccactgggggaaccttatatgtattattatagcaaattatgtttgttt
gtagatgagattgtgttgtctgaaccaaaagtgctctagaaaccaattag
acatcatctcacatatatcatctacgggcttatctaaatgtctgaccttt
atgcctttcgagtaatggatgaggtcaactgagtctaatgaattaaagac
tccaggatcatattttgaaatatccgttgacaatctgagtgatcttaggc
aaaaccacttaacctctcatccctgaggtgcgattattcacataaggcat
ataaccactctcagctcatgtatggttagtgagaatcacactatttttaa
tgtacataaatcattcagtgctaatatttaaatccatgataaagcaatta
tttgctgactagacagggatctccaaagagtttttatgaaaataaatcac
acagtatgttgaagtgtcatctgcttctcctaatagagcttgtaatgaat
tcaaatcaacacttgagtatattatgcttaaacacatacttgataaaatt
gacatgttcccatggtgtgggcattttgttcttcatctctgtaacctgag
gatgttaaaccttataagctgaatattttgatctgaaaagcaacctgttg
taaactttgttcagtaatagttcatgtccccaaaaccaaaaaattagaag
tcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053911_104054363
seq2: B6Ng01-121H07.b_45_497 (reverse)

seq1  CTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGG  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGG  50

seq1  GGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATG  100
      ||||| |||||||||||||||| |||||||||||||||||||||||||||
seq2  GGCATTTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATG  100

seq1  AATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATA  150
      || ||||| |||||||||| ||| ||||  |||||  |||||||||| ||
seq2  AACATAGTAGAGCATGTGTTCTTATTACAAGTTGGAACATCTTCTGGGTA  150

seq1  TATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATT  200
      ||||| ||| ||||||||||||||| | |  |||||||||||||||||||
seq2  TATGCACAGGAGAGGTATTGCTGGAACTTTTGGTAGTACTATGTCCAATT  200

seq1  TTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAA  250
      || ||| ||||||| | || ||||||||||||| || ||| ||| || ||
seq2  TTTTGAGGAACCGCTAAACTGATTTCCAGAGTGTTTATACCAGCTTGAAA  250

seq1  TCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA  300
      |||||||| |||||||||||||| | |||||||||| | |||||||||||
seq2  TCCCACCAGCAATGGAGGAGTGTACTTCTTTCTCCAAAACCTCGCCAGCA  300

seq1  TCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGT  350
      |||| ||||||||||||||||||||||||||||||||| | |||||| ||
seq2  TCTGTTGTCACCTGAATTTTTGATCTTAGCCATTCTGAATAGTGTGAAGT  350

seq1  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  400
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGGTGATTAAGGATATT  400

seq1  GAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAA  450
      ||||||||||||||| | ||||| ||||||| | ||||||||||||||||
seq2  GAACATTTTTTCAGGCGTTTCTCAGCCATTCAGCATTCCTCAGGTGAGAA  450

seq1  TTC  453
      |||
seq2  TTC  453

seq1: chr1_30566907_30567931
seq2: B6Ng01-121H07.g_66_1068 (reverse)

seq1  TGACTTCTTAATTTTTTTGTGTTTTGGGGACACTGAACTTTTAACTTGAA  50
      ||||||| |||||||||   |||||||||||| |||||| |||   ||||
seq2  TGACTTC-TAATTTTTT--GGTTTTGGGGACA-TGAACTATTA--CTGAA  44

seq1  CAAAGTTTTTACAAACAGGTTGTCTTTTTCAGATCAAAATATCTCAGCCT  100
      |||||  ||||| |||||||||   ||||||||||||||||| ||||| |
seq2  CAAAG--TTTAC-AACAGGTTG--CTTTTCAGATCAAAATAT-TCAGCTT  88

seq1  ATAAGGTTTAACATACCTCAAGATTACAGAGATGAAGAACAAAAATGCCC  150
      |||||||||||||| |||| || ||||||||||||||||| |||||||||
seq2  ATAAGGTTTAACAT-CCTC-AGGTTACAGAGATGAAGAAC-AAAATGCCC  135

seq1  ACACCATTGAGAACATGTCAATTTTATCAAGTATGTGTTTTAAGCATAAT  200
      |||||| || ||||||||||||||||||||||||||| ||||||||||||
seq2  ACACCA-TGGGAACATGTCAATTTTATCAAGTATGTG-TTTAAGCATAAT  183

seq1  ATAACTCAAGTGTTTGATTTGAATTTCATTACAAGCTCTATTAGGAGAAG  250
      || ||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  AT-ACTCAAGTG-TTGATTTGAA-TTCATTACAAGCTCTATTAGGAGAAG  230

seq1  CAGATGAACACTTCAACATAACTGTGTGATTTATTTTCATAAAAACCTCT  300
      |||||| |||||||||||| ||||||||||||||||||||||||| ||||
seq2  CAGATG-ACACTTCAACAT-ACTGTGTGATTTATTTTCATAAAAA-CTCT  277

seq1  TTGGAGATCCCTGTCTAGTCAGCAAATAATTGCTTTATCATGGATTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATCCCTGTCTAGTCAGCAAATAATTGCTTTATCATGGATTTAAA  327

seq1  TATTAGCACTGAATGATTTATGTACATT-AAAATAGTGTGATTCTCACTA  399
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATTAGCACTGAATGATTTATGTACATTAAAAATAGTGTGATTCTCACTA  377

seq1  ACCATTTATGAGCTGAGAGTGGTTATCTCCCTTCTGTGAATAATCGCACT  449
      |||||  ||||||||||||||||||| | |||| ||||||||||||||| 
seq2  ACCATACATGAGCTGAGAGTGGTTATATGCCTTATGTGAATAATCGCACC  427

seq1  TCAGGGAAGAAAGGTTAAGTGGTTTTGCCTAAGATCACTCAGATTGTCAA  499
      ||||||| || |||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGATGAGAGGTTAAGTGGTTTTGCCTAAGATCACTCAGATTGTCAA  477

seq1  CGGATATTTCAAAATATGATCCTGGAGTCTTTAATTCATTAGACTCAGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATATTTCAAAATATGATCCTGGAGTCTTTAATTCATTAGACTCAGTT  527

seq1  GACCTCAACCATTACTTGAAAGGCATAAAGGTCATACAGTTAGATAAGCC  599
      ||||||| |||||||| ||||||||||||||||| ||| |||||||||||
seq2  GACCTCATCCATTACTCGAAAGGCATAAAGGTCAGACATTTAGATAAGCC  577

seq1  CCTAGATGATATATGTGAGATGATGTCTAATTTGTTTCTAGAGCACTTTT  649
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CGTAGATGATATATGTGAGATGATGTCTAATTGGTTTCTAGAGCACTTTT  627

seq1  GCTTCAGACAACACAATCTCATCTACAAACAAACATAAATTACTATAATA  699
      | |||||||||||||||||||||||||||||||||||| || ||||||||
seq2  GGTTCAGACAACACAATCTCATCTACAAACAAACATAATTTGCTATAATA  677

seq1  ATAAATATAAGGTTCCCCCAGTGGAAGAGACTGATAGAATTCAAATACAA  749
      ||| |||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATACATATAAGGTTCCCCCAGTGGAAGAGAGTGATAGAATTCAAATACAA  727

seq1  ATTCCCAAAAGAGGTGATGAACTAAGAGACAATAGATGGATCATTGCAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAAAAGAGGTGATGAACTAAGAGACAATAGATGGATCATTGCAAA  777

seq1  TAATTTATTGAAAAGTAGAAGGAGAATGAGAAGAAATCAGAGAGCTTCTC  849
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TAATTTATTGAAAAGTAGAAGGAGAACGAGAAGAAATCAGAGAGCTTCTC  827

seq1  TGTGTAACCCCAGATCTTAACAAGCTCTAAATGAGACAAAAGAGATGCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAACCCCAGATCTTAACAAGCTCTAAATGAGACAAAAGAGATGCTA  877

seq1  TTTGTTAATGAGTCATATGTATTTCCTGAAAGTCATCCCTTGCAGCTACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTGTTAATGAGTCATATGTATTTCCTGAAAGTCATCCCTTGCAGCTTCA  927

seq1  GCATAACATGATTACATGTTACCAAGGCTACAGTAACAGTGCAAGTGCTA  999
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCATAACATGATTACATGTTACCAAGGGTACAGTAACAGTGCAAGTGCTA  977

seq1  TCATGGGTTATTGTAGTAGAGAATTC  1025
      |||||||||||||||| |||||||||
seq2  TCATGGGTTATTGTAGGAGAGAATTC  1003