BAC Information

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BAC

Clone NameB6Ng01-121I15
Chromosome10 (Build37)
Map Location 69,867,385 - 70,038,929
singlet/doubletdoublet
Overlap gene1200015N20Rik, LOC665398, Phyhipl
Upstream geneAnk3, LOC100039734, 5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9, LOC632955
Downstream geneEG665429, Bicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1, LOC665472, Zcd1, Ipmk, LOC100039860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121I15.bB6Ng01-121I15.g
ACCDH925196DH925197
length1,0971,056
definitionDH925196|Mus musculus domesticus DNA, BAC clone: B6Ng01-121I15, 5' end.DH925197|Mus musculus domesticus DNA, BAC clone: B6Ng01-121I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,867,385 - 69,868,479)(70,037,851 - 70,038,929)
sequence
gaattcctacgaggagggtggcacaggtaagcctcagaaaccatcagaac
cacagccctgcctaccagactctcccgctttctcctgcccagtgcctttg
ctacacttgcccacttaagattctgtcgtctatatcatgtacctacatct
agtaaccctcgaaatagcattatcagcttcctgcctcgttacgtgttaaa
tgttgagtccccggctcaaattcaaatactgaactcataacccctggtgt
gtctgtacctgcagatgggggctgtaaggaaggggtgtgggttagataac
gtctgacgggattaatatcttctttctaagaagagactccagagagttac
tcattctctgtctgcaaggagcacacaggatagccctgtggggacatgat
actagctaatggatgcctacaagctacaaaaagaaccgtcccaggaaaca
gaatgggtacccctaactttgtctcaattcagaaacttcagatgactctg
cttggctcagtgtgagctgtggccatacttttgaaaaggaaagaggggat
ttgtataaggcagtgcacactagaaacctgagttattcgcaggggtctgt
gtagcatatttttgggctactttattgggttcttttacctaccacccttc
tccaccccaaccccttccaatgccccaacactaaataggagagaaagaag
attaggggggaaagggagcatagacctctttagactacttcctgctggtt
agggatgtcaagatccttggggaatgtccaatcttcattatcagaatttc
tccaaccagcagcagcagaaagcagcaacagcggagcagctgcctccacc
tttctcagggctctggcatttttataccctcctctagagtccccagaatt
tcagatgtaaactatctgcagcagcagatcacacccatgccagagtccta
gacaaatcatagtcagctgctgttgcacagtctgaagtacaccccccata
ttccacacttggggttaaaacaaaaacattttcccatgacgtatctgtat
ttttaaagaaaccaacgctgtcactaccaggtctgaacttgtcgggt
gaattccacggtgctgagtgtgctcggttcacctacgaacttcaaaatca
cttatggctttgagaatgtggtagagagatccttaaaatagtcatttagc
aacctaaaattaaatggcagaaaaatgcacagaaagaaaagaaataagaa
agtaggtgttgctttccgccaattagataataattcaagctagaagaaca
aaggacaatgttaaatattaaaagctataactcataaccattagagaaac
attcagggcctcctaaaccaagtaacccaaacatccgtatttaagagcag
cagctcctgtggatgacgctatcagagaacagcctgttaccaataaggga
tttaagatgccactttttgtacaagatggatatagtgaataacagtaagg
aaacgtaccaacaatgtgacttagaattcagaaacaccagcccacttgcc
tgtacctgaatccagcctcgcacctccatactgcactagcagagaatgag
ccctcgggcaacagtcatagaaactaaggcaccacacacaacactggtca
catgcagtcaataggactagaaattaagatagaaaaatatgctttcacct
ttgggagaaaacagcaacttctgttagtcatgtatgggtgttagaggaag
aaaaaatctagaatgtctctgaaaatacagtgaaaagaccatccatcaga
acgtacggggatatacttaaagcactggccaagcaaagataatcagtgta
aatagttaaagaatgtaagagtgagacagcgaaagcaaatacagtgattc
agggttcatcctgaaacagggctatctgattgcaaaatagtaagccagta
aagataaatgcaaaaattaaaagagagaaaaaactaagcctccactaatg
caacaattatcaggagcccatttttctaaacccacaaaatgctaggctaa
aaagaacaaatgtcaagtagatgggacaatacactaattttaggcacttt
aaactggagactcatgcatacttctaatacctttaagagttgtatctgaa
tactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_69867385_69868479
seq2: B6Ng01-121I15.b_44_1140

seq1  GAATTCCTACGAGGAGGGTGGCACAGGTAAGCCTCAGAAACCATCAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACGAGGAGGGTGGCACAGGTAAGCCTCAGAAACCATCAGAAC  50

seq1  CACAGCCCTGCCTACCAGACTCTCCCGCTTTCTCCTGCCCAGTGCCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCCTGCCTACCAGACTCTCCCGCTTTCTCCTGCCCAGTGCCTTTG  100

seq1  CTACACTTGCCCACTTAAGATTCTGTCGTCTATATCATGTACCTACATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTTGCCCACTTAAGATTCTGTCGTCTATATCATGTACCTACATCT  150

seq1  AGTAACCCTCGAAATAGCATTATCAGCTTCCTGCCTCGTTACGTGTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACCCTCGAAATAGCATTATCAGCTTCCTGCCTCGTTACGTGTTAAA  200

seq1  TGTTGAGTCCCCGGCTCAAATTCAAATACTGAACTCATAACCCCTGGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGTCCCCGGCTCAAATTCAAATACTGAACTCATAACCCCTGGTGT  250

seq1  GTCTGTACCTGCAGATGGGGGCTGTAAGGAAGGGGTGTGGGTTAGATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTACCTGCAGATGGGGGCTGTAAGGAAGGGGTGTGGGTTAGATAAC  300

seq1  GTCTGACGGGATTAATATCTTCTTTCTAAGAAGAGACTCCAGAGAGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACGGGATTAATATCTTCTTTCTAAGAAGAGACTCCAGAGAGTTAC  350

seq1  TCATTCTCTGTCTGCAAGGAGCACACAGGATAGCCCTGTGGGGACATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTCTGTCTGCAAGGAGCACACAGGATAGCCCTGTGGGGACATGAT  400

seq1  ACTAGCTAATGGATGCCTACAAGCTACAAAAAGAACCGTCCCAGGAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCTAATGGATGCCTACAAGCTACAAAAAGAACCGTCCCAGGAAACA  450

seq1  GAATGGGTACCCCTAACTTTGTCTCAATTCAGAAACTTCAGATGACTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGTACCCCTAACTTTGTCTCAATTCAGAAACTTCAGATGACTCTG  500

seq1  CTTGGCTCAGTGTGAGCTGTGGCCATACTTTTGAAAAGGAAAGAGGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCAGTGTGAGCTGTGGCCATACTTTTGAAAAGGAAAGAGGGGAT  550

seq1  TTGTATAAGGCAGTGCACACTAGAAACCTGAGTTATTCGCAGGGGTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAAGGCAGTGCACACTAGAAACCTGAGTTATTCGCAGGGGTCTGT  600

seq1  GTAGCATATTTTTGGGCTACTTTATTGGGTTCTTTTACCTACCACCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCATATTTTTGGGCTACTTTATTGGGTTCTTTTACCTACCACCCTTC  650

seq1  TCCACCCCAACCCCTTCCAATGCCCCAACACTAAATAGGAGAGAAAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCCAACCCCTTCCAATGCCCCAACACTAAATAGGAGAGAAAGAAG  700

seq1  ATTAGGGGGGAAAGGGAGCATAGACCTCTTTAGACTACTTCCTGCTGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGGGGGAAAGGGAGCATAGACCTCTTTAGACTACTTCCTGCTGGTT  750

seq1  AGGGATGTCAAGATCCTTGGGGAATGTCCAATCTTCATTATCAGAATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGTCAAGATCCTTGGGGAATGTCCAATCTTCATTATCAGAATTTC  800

seq1  TCCAACCAGCAGCAGCAG-AAGCAGCAACAGCGGAGCAGCTGCCTCCACC  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCCAACCAGCAGCAGCAGAAAGCAGCAACAGCGGAGCAGCTGCCTCCACC  850

seq1  TTTCTCAGGGCTCTGGCATTTTTATACCCT-CTCTAGAGTCCCCAGAATT  898
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTCTCAGGGCTCTGGCATTTTTATACCCTCCTCTAGAGTCCCCAGAATT  900

seq1  CCAGATGTAAACTATCTGCAGCAGGCAGAATCACACCCATGCCAGAGCAC  948
       |||||||||||||||||||||| |||| ||||||||||||||||||  |
seq2  TCAGATGTAAACTATCTGCAGCA-GCAG-ATCACACCCATGCCAGAGTCC  948

seq1  TAGACAAATCATAGTCAGCTGCTG-TGCACAGTCTGAAGTACACCCCCCA  997
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAGACAAATCATAGTCAGCTGCTGTTGCACAGTCTGAAGTACACCCCCCA  998

seq1  TATCCCACACTTGGGATTAAAACAAAAACATATTCCCATGACGTATCTGT  1047
      ||| ||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  TATTCCACACTTGGGGTTAAAACAAAAACATTTTCCCATGACGTATCTGT  1048

seq1  ATTTTTAAAGAAACCAACGCTGTCACTACCA-GTCTGTACTTGTCGGGT  1095
      ||||||||||||||||||||||||||||||| ||||| |||||||||||
seq2  ATTTTTAAAGAAACCAACGCTGTCACTACCAGGTCTGAACTTGTCGGGT  1097

seq1: chr10_70037851_70038929
seq2: B6Ng01-121I15.g_67_1122 (reverse)

seq1  TCAGTATTCAGATAACCAAAACTCTTTAAAAGTATTAGAAGTATGCATGA  50
      |||||||||||||    | ||||| ||||| |||||||||||||||||||
seq2  TCAGTATTCAGAT----ACAACTC-TTAAAGGTATTAGAAGTATGCATGA  45

seq1  ATGTCTCAAGTTTTTAAAGTGCCTTAAAATTTAAGTGGTTATTTGTCCCA  100
        ||||| ||  ||||||||||| |||||||  ||||  || ||||||||
seq2  --GTCTCCAG--TTTAAAGTGCC-TAAAATT--AGTG--TA-TTGTCCCA  85

seq1  TCTACTTGGACATTTGTTTCCTTTTTTAGCTAGCATTTTTTGTTGGTTTT  150
      ||||||| ||||||||||  ||||||   ||||||||||    ||| |||
seq2  TCTACTT-GACATTTGTT--CTTTTTAGCCTAGCATTTT---GTGGGTTT  129

seq1  AGAAAAATGGGCT-CTGAATATTGTTGCATTAGT-GAGGCTTAGTTTTTT  198
      ||||||||||||| ||||  |||||||||||||| ||||||||| |||||
seq2  AGAAAAATGGGCTCCTGATAATTGTTGCATTAGTGGAGGCTTAG-TTTTT  178

seq1  TCTCTCTTTTTAATTTTTTGCATTTATCTTTACTGGCTTACTATTTTTGC  248
      ||||||||||  | ||||||||||||||||||||||||||||| ||||||
seq2  TCTCTCTTTT--AATTTTTGCATTTATCTTTACTGGCTTACTA-TTTTGC  225

seq1  AATCAGATAGCCCTGTTTCAGGATGAACCCTGAATTCACTGTATTTGCTT  298
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AATCAGATAGCCCTGTTTCAGGATGAACCCTGAA-TCACTGTATTTGCTT  274

seq1  TCGCTGTCTCACTCTTACATTCTTTAACTATTTACACTGATTATCTTTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTGTCTCACTCTTACATTCTTTAACTATTTACACTGATTATCTTTGC  324

seq1  TTGGCCAGTGCTTTAAGTATAT-CCCGTACGTTCTGATGGATGGTCTTTT  397
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGGCCAGTGCTTTAAGTATATCCCCGTACGTTCTGATGGATGGTCTTTT  374

seq1  CACTGTATTTTCAGAGACATTCTAGATTTTTTCTTCCTCTAACACCCATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTATTTTCAGAGACATTCTAGATTTTTTCTTCCTCTAACACCCATA  424

seq1  CATGACTAACAGAAGTTGCTGTTTTCTCCCAAAGGTGAAAGCATATTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTAACAGAAGTTGCTGTTTTCTCCCAAAGGTGAAAGCATATTTTT  474

seq1  CTATCTTAATTTCTAGTCCTATTGACTGCATGTGACCAGTGTTGTGTGTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTAATTTCTAGTCCTATTGACTGCATGTGACCAGTGTTGTGTGTG  524

seq1  GTGCCTTAGTTTCTATGACTGTTGCCCGAGGGCTCATTCTCTGCTAGTGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTAGTTTCTATGACTGTTGCCCGAGGGCTCATTCTCTGCTAGTGC  574

seq1  AGTATGGAGGTGCGAGGCTGGATTCAGGTACAGGCAAGTGGGCTGGTGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGGAGGTGCGAGGCTGGATTCAGGTACAGGCAAGTGGGCTGGTGTT  624

seq1  TCTGAATTCTAAGTCACATTGTTGGTACGTTTCCTTACTGTTATTCACTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTCTAAGTCACATTGTTGGTACGTTTCCTTACTGTTATTCACTA  674

seq1  TATCCATCTTGTACAAAAAGTGGCATCTTAAATCCCTTATTGGTAACAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATCTTGTACAAAAAGTGGCATCTTAAATCCCTTATTGGTAACAGG  724

seq1  CTGTTCTCTGATAGCGTCATCCACAGGAGCTGCTGCTCTTAAATACGGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTCTGATAGCGTCATCCACAGGAGCTGCTGCTCTTAAATACGGAT  774

seq1  GTTTGGGTTACTTGGTTTAGGAGGCCCTGAATGTTTCTCTAATGGTTATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGTTACTTGGTTTAGGAGGCCCTGAATGTTTCTCTAATGGTTATG  824

seq1  AGTTATAGCTTTTAATATTTAACATTGTCCTTTGTTCTTCTAGCTTGAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAGCTTTTAATATTTAACATTGTCCTTTGTTCTTCTAGCTTGAAT  874

seq1  TATTATCTAATTGGCGGAAAGCAACACCTACTTTCTTATTTCTTTTCTTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCTAATTGGCGGAAAGCAACACCTACTTTCTTATTTCTTTTCTTT  924

seq1  CTGTGCATTTTTCTGCCATTTAATTTTAGGTTGCTAAATGACTATTTTAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATTTTTCTGCCATTTAATTTTAGGTTGCTAAATGACTATTTTAA  974

seq1  GGATCTCTCTACCACATTCTCAAAGCCATAAGTGATTTTGAAGTTCGTAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCTCTACCACATTCTCAAAGCCATAAGTGATTTTGAAGTTCGTAG  1024

seq1  GTGAACCGAGCACACTCAGCACCGTGGAATTC  1079
      ||||||||||||||||||||||||||||||||
seq2  GTGAACCGAGCACACTCAGCACCGTGGAATTC  1056